Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,806,959 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,806,9590AT99.8% 940.3 / NA 395intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base T (188/205);  total (189/206)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,806,9600GC99.8% 941.9 / NA 395intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (189/205);  total (189/206)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,806,9610CG99.8% 934.2 / NA 395intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (189/204);  total (189/206)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 395 total aligned reads displayed.

ATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑AGTAGCCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGAGCAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGA  >  CP042583/1806679‑1807242
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                          
atGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAAtttt                                                                                                                                                                                                                                                                                      >  1:1157357/1‑289 (MQ=255)
atGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAAtttt                                                                                                                                                                                                                                                                                      >  1:100558/1‑289 (MQ=255)
    gaTTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTTGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAAt                                                                                                                                                                                                                                                                                   <  2:2351508/288‑1 (MQ=255)
    gaTTCAGATCACATATAAAGCCACAACGGGCTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAAt                                                                                                                                                                                                                                                                                   <  1:2028329/288‑1 (MQ=255)
       tCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCCGGCGGCGGCCCGTGCGCGTACGGGATTGTCGAATTTTAATGTTg                                                                                                                                                                                                                                                                               >  1:2736962/1‑289 (MQ=255)
                  ataAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcg                                                                                                                                                                                                                                                                    <  1:3318212/289‑1 (MQ=255)
                   taAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgc                                                                                                                                                                                                                                                                   <  1:2634273/289‑1 (MQ=255)
                             aCGGGTGCGCAAACTGTTATCCCATTACATGATTATGAGGCAACCCCATGCATCAACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAg                                                                                                                                                                                                                                                         <  2:969822/289‑1 (MQ=255)
                                    cGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAAcc                                                                                                                                                                                                                                                  <  1:551380/289‑1 (MQ=255)
                                           tGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAg                                                                                                                                                                                                                                                         >  2:1925019/1‑275 (MQ=255)
                                             ttATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTgcgc                                                                                                                                                                                                                                                                   <  2:2750852/263‑1 (MQ=255)
                                             ttATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAAcc                                                                                                                                                                                                                                                  <  2:1322236/280‑1 (MQ=255)
                                                     ttACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACACGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATCCGCACTACTTCCGCTGGCGGCGGCCTGTCCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGGGACCGGAACCTGGTATTTCGGTTCCaa                                                                                                                                                                                                                                 >  2:2397920/1‑289 (MQ=255)
                                                     ttACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGC‑‑‑‑CTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATg                                                                                                                                                                                                                             <  2:1703983/289‑1 (MQ=255)
                                                       aCATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAata                                                                                                                                                                                                                               >  2:1275482/1‑289 (MQ=255)
                                                            aTTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGaa                                                                                                                                                                                                                          >  1:2981394/1‑289 (MQ=255)
                                                                tGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTa                                                                                                                                                                                                                      >  1:757448/1‑289 (MQ=255)
                                                                 gAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTAt                                                                                                                                                                                                                     <  1:2394920/289‑1 (MQ=255)
                                                                  aGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTTCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCCCGCGGGTTGAGGGGAACCTGGTATTTCGGTGCCAAAAGGGAAtttttt                                                                                                                                                                                                                    >  2:914725/1‑289 (MQ=255)
                                                                  aGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTAtt                                                                                                                                                                                                                    >  1:236112/1‑289 (MQ=255)
                                                                     cAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTg‑g                                                                                                                                                                                                                 <  1:725638/288‑1 (MQ=255)
                                                                     cAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTg‑g                                                                                                                                                                                                                 <  1:1639811/288‑1 (MQ=255)
                                                                       aCGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCGGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGc                                                                                                                                                                                                              >  1:1109490/1‑289 (MQ=255)
                                                                        cGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTCCGGCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGACCCTGGTATTCAGGTGCCAATAAGGAATTTTATG‑GTACg                                                                                                                                                                                                             >  2:2793036/1‑289 (MQ=255)
                                                                         gCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGa                                                                                                                                                                                                            <  1:908444/289‑1 (MQ=255)
                                                                         gCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGa                                                                                                                                                                                                            <  2:508075/289‑1 (MQ=255)
                                                                         gCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGa                                                                                                                                                                                                            <  2:1031559/289‑1 (MQ=255)
                                                                             tGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGCCAAt                                                                                                                                                                                                        >  1:1510064/1‑289 (MQ=255)
                                                                              gCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGgt                                                                                                                                                                                                                                                              >  1:3200370/1‑235 (MQ=255)
                                                                              gCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAAt                                                                                                                                                                                                        >  1:294227/1‑288 (MQ=255)
                                                                                aTCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATgca                                                                                                                                                                                                     <  2:2620056/289‑1 (MQ=255)
                                                                                  ccACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGATTTTATTG‑GTGCGACAATgcagc                                                                                                                                                                                                   >  1:991099/1‑289 (MQ=255)
                                                                                         ttCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGt                                                                                                                                                                                            <  1:1456470/289‑1 (MQ=255)
                                                                                         ttCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGt                                                                                                                                                                                            <  1:463462/289‑1 (MQ=255)
                                                                                                  cTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGa                                                                                                                                                                                   >  1:2858523/1‑289 (MQ=255)
                                                                                                    tttGCCCAACTTTCGGTTAACTTGCAATCTGCACTGGAAACTATGCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGGGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAAc                                                                                                                                                                                 <  2:1109490/289‑1 (MQ=255)
                                                                                                             cTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGa                                                                                                                                                                        >  1:634523/1‑289 (MQ=255)
                                                                                                                 cGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGgt                                                                                                                                                                                                                                                              <  1:1318250/200‑1 (MQ=255)
                                                                                                                        cTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGGGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGcc                                                                                                                                                             <  1:1335050/289‑1 (MQ=255)
                                                                                                                                   cACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAACTCCTCGCGGTGCGGGCGGAATCTGGTATTTCGTTGCCAATATGGAATTAAGTGTTTGCG‑CACTGCAGCAATACGTTCATGCCGAACAAAGCGCGACTAGCCACACCTCGtgggcagt                                                                                                                                                  >  2:345427/1‑282 (MQ=255)
                                                                                                                                           ccTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGc                                                                                                                                                                                                                                    <  2:1205417/200‑1 (MQ=255)
                                                                                                                                           ccTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAg                                                                                                                                                                    >  2:3115893/1‑263 (MQ=255)
                                                                                                                                                 cTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTg                                                                                                                                    <  1:1713733/289‑1 (MQ=255)
                                                                                                                                                   ggCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTTCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCGGGGTGGGTGTGTAAAAAGCCCTTGcc                                                                                                                                  >  2:871320/1‑288 (MQ=255)
                                                                                                                                                   ggCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACAGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGGGGTGAAAAAGCGCTTGCa                                                                                                                                  >  1:2120454/1‑289 (MQ=255)
                                                                                                                                                    gCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAg                                                                                                                                                     >  1:3139800/1‑269 (MQ=255)
                                                                                                                                                    gCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAg                                                                                                                                                     <  2:1372826/269‑1 (MQ=255)
                                                                                                                                                     caaccAAGTAGTGCCCCGCTTTGTTGCACGGGGAGCAGGTC‑TCATCGCTGAAGAGCGCAACGGGGGTGGACGAAGACGCGCGGGCATTCGCACTACTTCCGCGGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAg                                                                                                                                 <  2:2295883/284‑1 (MQ=255)
                                                                                                                                                     cAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTgg                                                                                                                                                          >  1:1091441/1‑263 (MQ=255)
                                                                                                                                                     cAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTgg                                                                                                                                                          <  2:1091441/263‑1 (MQ=255)
                                                                                                                                                      aGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCACAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCaa                                                                                                                                                                                                 <  2:588992/223‑1 (MQ=255)
                                                                                                                                                        aaaaGTACTTCCCCGGTTTGTTGACCGGGGGGCAAGTCTAATCG‑CTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCAt                                                                                                                             <  2:3024080/287‑1 (MQ=255)
                                                                                                                                                        aaaaGTACTTCCCCGCTTGGTTGGACGGGGAGCAAGGC‑TCATCGCTGGAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGGGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCAt                                                                                                                             <  2:3150827/287‑1 (MQ=255)
                                                                                                                                                         cAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGTGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCa                                                                                                                              <  2:1999241/287‑1 (MQ=255)
                                                                                                                                                         cAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCAt                                                                                                                             <  1:362138/288‑1 (MQ=255)
                                                                                                                                                         cAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCAt                                                                                                                             <  1:1205032/288‑1 (MQ=255)
                                                                                                                                                         aaaGTACTTCCCCTCTTTGTTGACCGGGGAGCAAGTCGCGTCG‑CTGAAGGGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATc                                                                                                                            <  2:1350415/288‑1 (MQ=255)
                                                                                                                                                          aaGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCa                                                                                                                           <  2:2922689/289‑1 (MQ=255)
                                                                                                                                                              aCTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGt                                                                                                                       <  1:3217063/289‑1 (MQ=255)
                                                                                                                                                                  ccccGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAgc                                                                                                                                                                            <  2:647811/232‑1 (MQ=255)
                                                                                                                                                                    ccGCTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTa                                                                                                                 >  1:257727/1‑289 (MQ=255)
                                                                                                                                                                       cTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGtt                                                                                                                                                        >  1:222410/1‑247 (MQ=255)
                                                                                                                                                                       cTTTGTTGACCGGGGAGCAAGTC‑TCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGtt                                                                                                                                                        <  2:222410/247‑1 (MQ=255)
                                                                                                                                                                                         caagtctcatcgcTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGCGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGcc                                                                                             >  2:767089/13‑289 (MQ=255)
                                                                                                                                                                                           agtctcatcgcTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGTATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGt                                                                                           <  1:848209/279‑1 (MQ=255)
                                                                                                                                                                                           agtctcatcgcTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGt                                                                                           <  1:1672137/279‑1 (MQ=255)
                                                                                                                                                                                           agtctcatcgcTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGt                                                                                           <  1:2136263/279‑1 (MQ=255)
                                                                                                                                                                                            gtctcatcgcTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGt                                                                                                                                                                                            <  1:2765361/182‑1 (MQ=255)
                                                                                                                                                                                                 atcgcTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGtt                                                                                                                      <  2:2499580/252‑1 (MQ=255)
                                                                                                                                                                                                 atcgcTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCa                                                                                         >  1:1385438/5‑285 (MQ=255)
                                                                                                                                                                                                        aaGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTatgaatg                                                                              >  1:3108950/1‑289 (MQ=255)
                                                                                                                                                                                                             cgcAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAACGCGCTTGCAGCCATCACCGTTAACTACACGCCTTTTGGTCAATGCCGTCAGGTTAGTAAtgaaatg                                                                         >  2:1436780/1‑289 (MQ=255)
                                                                                                                                                                                                             cgcAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAg                                                                                                                                          <  2:1723399/224‑1 (MQ=255)
                                                                                                                                                                                                             cgcAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAAtgaactg                                                                         >  2:2135579/1‑289 (MQ=255)
                                                                                                                                                                                                             cgcAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGGTCCAATATGGAATTTGTTG‑GTGCGACAATGCAGCAAACAGATCATGCCCAACAAAGCGCGATCAGCCACGCCGGGTTGAGTGGTGTAAAAGCCCTTGCAGCCATCACCGTTAACTACCCGACTTGTGGTCCCTGCCGTCAGTTTATGAAtgaactt                                                                         >  2:1669832/1‑288 (MQ=255)
                                                                                                                                                                                                                aaCGGGGCTGGACGAATACGGGCTGGTATTCGGACTACGTCCGCTTGCGGCGGCCTGTGCGCGTACGCAATTGTCGAATTTTAATGTAGGCGAAAGTGTGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAAtgaactgaa                                                                       <  2:2108004/288‑1 (MQ=255)
                                                                                                                                                                                                                  cGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCa                                                                                                                              <  1:1954329/231‑1 (MQ=255)
                                                                                                                                                                                                                  cGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAg                                                                    <  1:2461856/289‑1 (MQ=255)
                                                                                                                                                                                                                  cGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAg                                                                    <  1:935646/289‑1 (MQ=255)
                                                                                                                                                                                                                   ggggCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAg                                                                    <  2:827207/288‑1 (MQ=255)
                                                                                                                                                                                                                   ggggCTGGAAGAAGGCCGGGTTGCGTTTGGACTAATTCCGCTGGCGGCGGCCTGTGGGGGTAAGCCATTGTGGAATTTTAATGTTGGCGCAATTGGGGGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GGGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAg                                                                    <  2:2960377/288‑1 (MQ=255)
                                                                                                                                                                                                                           aCGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGa                                                           >  1:1734014/1‑289 (MQ=255)
                                                                                                                                                                                                                              aaaccgcgCTGGCATTCGAACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCt                                                        <  1:1249573/285‑1 (MQ=255)
                                                                                                                                                                                                                               aGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTac                                                                                                                <  1:2822591/232‑1 (MQ=255)
                                                                                                                                                                                                                               aGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTac                                                                                                                >  2:2822591/1‑232 (MQ=255)
                                                                                                                                                                                                                               aGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCGTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTATTGATCt                                                        >  1:80193/1‑288 (MQ=255)
                                                                                                                                                                                                                               aGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTCGAGTGGTGAAAAAGCGCTTGCAGCCCTCACCGTTAACTTCACCCCTTGTGGTCACTGCCGTCAGTTTTTGAATTAACTGAACAGCGTTTTGGAGCTg                                                       >  2:3203190/1‑289 (MQ=255)
                                                                                                                                                                                                                                    cgcTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTg                                                                                                                                                                                                                                     >  2:3269436/1‑111 (MQ=255)
                                                                                                                                                                                                                                    cgcTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTg                                                                                                                                                                                                                                     <  1:3269436/111‑1 (MQ=255)
                                                                                                                                                                                                                                    cgcTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTg‑g                                                                                                                                                                                                                 >  1:39749/1‑130 (MQ=255)
                                                                                                                                                                                                                                    cgcTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGa                                                                                                                                                                                                            <  1:663505/135‑1 (MQ=255)
                                                                                                                                                                                                                                             tCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCa                                                                                                                                  <  2:42402/200‑1 (MQ=255)
                                                                                                                                                                                                                                                   tactTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGc                                                                                                                                                                   <  1:2279291/161‑1 (MQ=255)
                                                                                                                                                                                                                                                     ctTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGt                                                                <  1:1915258/258‑1 (MQ=255)
                                                                                                                                                                                                                                                             ggcggcggcCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGgt                                                                                                                                                                                                                                                              >  2:72652/1‑61 (MQ=255)
                                                                                                                                                                                                                                                               cggcggcCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTac                                                                                                                <  2:1772514/200‑1 (MQ=255)
                                                                                                                                                                                                                                                                  cggcCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACgcgc                     <  1:3025979/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gtgCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACg                                                                                                                                                               >  2:1580521/1‑144 (MQ=255)
                                                                                                                                                                                                                                                                             cgTACGACGTTGACTAATATTACTGTTGTGGCAATTGCGCGCGTTGTGAGCGGAACCTGGTATTTCGGTGGCAATATGGAATTTATTG‑GAGCGACAATGCAGCAAAGCGTTCATGCCCAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAGGCGCTTGCAGCCATCACCGTTAACTACACGCCTGGTGGTCACTGCCGTCAGTTTATGAATGGACTGAACAGCGGTCTGGATCTGCGTATTCATCGGCCGGGCCGCGAGGCACACGCGCTGCGTGACTAt          <  2:1185666/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 cGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCAc                                                                                                                                                                <  2:1507673/134‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                          
ATGAGATTCAGATCACATATAAAGCCACAACGGGTTCGTAAACTGTTATCCCATTACATGATTATGAGGCAACGCCATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTC‑AGTAGCCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGAGCAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTG‑GTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGA  >  CP042583/1806679‑1807242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A