Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F210 I1 R1
|
4928 |
385.2 |
6658600 |
97.5% |
6492135 |
231.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,949,786 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,949,786 | 0 | A | T | 98.8%
| 569.7
/ NA
| 242 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (132/107); minor base G (0/3); total (132/110) |
| Fisher's exact test for biased strand distribution p-value = 9.25e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,949,787 | 0 | C | G | 100.0%
| 574.7
/ NA
| 242 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (132/110); total (132/110) |
| * | CP042583 | 1,949,788 | 0 | T | A | 100.0%
| 583.5
/ NA
| 242 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (132/110); total (132/110) |
Only 100 of 242 total aligned reads displayed.
CACCAGGGCTGGCGTTTTTCTGCCGGATGCAGCTCCAGCCAGTCGGCAATATTGGCAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGACTCAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGC > CP042583/1949511‑1950067
|||
cACCAGGGCTGGCGTTTTTCTGCCGGATGCAGCTCCAGCCAGTCGGCAATATTGGCAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCg > 1:1994539/1‑288 (MQ=255)
ggCGTTTTTCTGCCGGATGCAGCTCCAGCCAGTCGGCAATATTGGCAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCCCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATcccgtt > 1:3022317/1‑284 (MQ=255)
gCGTTTTTCTGCCGGATGCAGCTCCAGCCAGTCGGCAATATTGGCAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCgg > 1:3078569/1‑288 (MQ=255)
gCGTTTTTCTGCCGGATGCAGCTCCAGCCAGTCGGCAATATTGGCAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCgg > 1:1845596/1‑288 (MQ=255)
cTGCCGGATGCAGCTCCAGCCAGTCGGCAATATTGGCAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAag < 2:1563747/289‑1 (MQ=255)
tCGGCAATATTGGCAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAagag < 1:155321/268‑1 (MQ=255)
aaTATTGGCAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTg < 2:3078569/289‑1 (MQ=255)
cAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCtt < 2:2788695/288‑1 (MQ=255)
tAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGc > 2:462457/1‑288 (MQ=255)
tCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGTGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGcc < 2:736058/222‑1 (MQ=255)
tCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATgcg > 1:3272630/1‑288 (MQ=255)
ttgtgCCGGATCAAGGCGCCCTTCAAGGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCGTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAac < 2:2359602/287‑1 (MQ=255)
ggCCGGATCAAGTCGCCCTTCAATGTC‑TCACACAATCCAGTACTCTTCTGGTTCACGGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAaccac < 2:2865811/287‑1 (MQ=255)
aGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGCCAGGCTGCTTCCCAGTTGCACCGCAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCaa < 2:371183/274‑1 (MQ=255)
aGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGCCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCaa > 1:371183/1‑274 (MQ=255)
ccTTCAATGGCCTCA‑ACAATCAGGTTCTCCTCTGGGTAACCGCTTGGCTGCCATTGCAGGGGCCGTTTCCCCCGCGGGCTGCTTCCCAGTTGCACCAAAATTTGCCCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTc < 2:1760427/289‑1 (MQ=255)
tca‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGc > 1:2809941/1‑279 (MQ=255)
tCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGTGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTcgc > 1:1415829/1‑288 (MQ=255)
tCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGccc < 1:242428/244‑1 (MQ=255)
tCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTcgcg < 1:2889338/289‑1 (MQ=255)
tCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTcgc > 1:2688558/1‑288 (MQ=255)
tACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGtt > 1:3309388/1‑289 (MQ=255)
ctctTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGcc < 2:3281523/216‑1 (MQ=255)
ctctTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGtttt > 1:2869492/1‑289 (MQ=255)
ttctGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCCGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCa < 2:3236152/289‑1 (MQ=255)
ttctGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCa < 2:3094192/202‑1 (MQ=255)
ttctGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTc > 1:953952/1‑288 (MQ=255)
ttctGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTc > 1:2783317/1‑288 (MQ=255)
ttctGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCCACTCCGCCCTCACGCCCCCGCCAACCACCACCCCGCGCTATTCTCGCCACAACCACCAGTAGCCCTGTCTTTc > 2:2823762/1‑288 (MQ=255)
ttctGGTTCACAGCTTGCCTGCCATTGAAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGcc < 2:1000079/213‑1 (MQ=255)
ttctGGTTCACAGCTTGCCTGCCATTGAAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGcc > 1:1000079/1‑213 (MQ=255)
ctGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAagag > 1:2767581/1‑183 (MQ=255)
ctGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAagag < 2:2767581/183‑1 (MQ=255)
cacaGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAagag > 1:1221448/1‑177 (MQ=255)
cacaGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAagag < 2:1221448/177‑1 (MQ=255)
caGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATTCGCCCGGCAACCACCCCGCCGCGCTTTTGTCGCCCGACTACACACTCGCGCTGACTTTCACTTTCCAgc > 2:2123587/1‑287 (MQ=255)
caGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGAc > 1:1674613/1‑289 (MQ=255)
caGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATCCGCCCGGCAACCACCCCGCCGCGCTTTTGTCGCCCGAAGCACCCGTCGCGCTGTATTCCACTTTcccg > 2:1254866/1‑285 (MQ=255)
aTTGCAGGAGCCGTTTCCCCGTCAGCCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACg < 1:2118462/289‑1 (MQ=255)
gCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACgg > 1:310743/1‑289 (MQ=255)
tCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTgtc < 2:1674613/289‑1 (MQ=255)
tCCCCGTAAGGCTGGTTCCCAGTTGCACAACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGACCGCCACACGGCAGCGGCTGCCAGGTTTGTGACAGCACCTACCCAATCTGCAGCCAGCCAAGAGTTTTCGCCCACAGAGCAACTTTTTTCACCTCTTCCGCAATCATGCGCACGGCTACCCACACGCCCCCACTCTCTGGCAAGTACACCCAATCGACCTTCTTTTCACTTCTCAGCCGTAGTGCTTCACTCAACCACGATCTgtc > 2:1858652/1‑289 (MQ=255)
ctTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAg > 1:1516450/1‑288 (MQ=255)
cccAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTc > 1:3155901/1‑205 (MQ=255)
gccccacAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATGGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACg < 1:336175/286‑1 (MQ=255)
gCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACCTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGAc > 2:1324236/1‑288 (MQ=255)
accacAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCt < 1:462457/289‑1 (MQ=255)
ccacAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCa < 2:2405305/199‑1 (MQ=255)
caATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCa > 1:192444/1‑221 (MQ=255)
caATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCa < 2:192444/221‑1 (MQ=255)
tttGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGcc > 2:931373/1‑288 (MQ=255)
gcgcCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCt < 1:495623/289‑1 (MQ=255)
ggcCTGCTGCAGCTCGCTGGCCGCCTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCt < 2:2995396/287‑1 (MQ=255)
cgcCTGCGGCAGCTCGCTGTTCGCTTTGGCATTGCCTAACCAACGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCt < 2:2876567/288‑1 (MQ=255)
ctgcAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGa > 1:2379625/1‑268 (MQ=255)
ctgcAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTCAGCCCg > 1:1341017/1‑289 (MQ=255)
aGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTa < 1:1751291/288‑1 (MQ=255)
cGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAACCCGGTATCGt > 1:3235906/1‑288 (MQ=255)
cTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGcc < 2:43127/244‑1 (MQ=255)
tGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCa > 2:109740/1‑197 (MQ=255)
tGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCa < 1:109740/197‑1 (MQ=255)
ggCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGAGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGCAGAACCAGTAGCGATGTTCTTCACGTCCCAGACGATGCGCTTCACGCAGCCACGGTTTGTAGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATTCTCCATGTCGcccac > 2:2012035/1‑285 (MQ=255)
cATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTcgcg < 1:3006399/175‑1 (MQ=255)
cATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGcc < 2:1609449/213‑1 (MQ=255)
gCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCg > 1:790407/1‑153 (MQ=255)
ccTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACg < 2:1806217/203‑1 (MQ=255)
ccTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCt > 1:1815642/1‑254 (MQ=255)
aacgATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACGTCGCCAATCAGCGGCAAGCAAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCaaa < 1:253791/286‑1 (MQ=255)
aaagtgcGGCACCCGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAAGCAGCGGCCAGCCAAGAGTTTGCGCCCCCAGGGCAACTTTTTTGCCCTCTTCCGAACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCaaa < 2:154001/283‑1 (MQ=255)
aGATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGcc > 1:1052040/1‑217 (MQ=255)
gATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTg < 2:3146108/238‑1 (MQ=255)
gATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑g < 2:821701/274‑1 (MQ=255)
gATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑g > 1:821701/1‑274 (MQ=255)
gATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAACCgg > 1:2500419/1‑289 (MQ=255)
gATCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACgg > 2:661009/1‑289 (MQ=255)
aTCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGCGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACggg > 1:1754479/1‑289 (MQ=255)
tCGGCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACggg < 1:1171327/288‑1 (MQ=255)
ggCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAaccac < 2:300831/120‑1 (MQ=255)
ggCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATa < 2:2106691/267‑1 (MQ=255)
ggCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAg < 2:1417292/289‑1 (MQ=255)
gCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGt > 1:2553465/1‑289 (MQ=255)
gCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGt > 1:163746/1‑289 (MQ=255)
gCACACGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTGTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGGTTTTCACTTTCCAGACGAGGCTCTTCACGCACCCACGGTTTGTTGTCCGTCCACCCGTGACCCACACGCAGTTGCCAGCCAAGCCCGGCATCGTCCACTTCGCC‑CACACGCGGTTCAGCAAAccgtgagt > 2:253791/1‑282 (MQ=255)
cacaCGGCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCaa > 1:2015467/1‑279 (MQ=255)
cacaCGGCAGCGGCTGCCCGGTTTGGGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGt < 2:2553465/288‑1 (MQ=255)
gcaaactcttggCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCAttt < 1:2192188/247‑1 (MQ=255)
ggCAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTcgcg < 2:1734710/149‑1 (MQ=255)
cAGCGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATgg > 1:2097927/1‑289 (MQ=255)
gCGGGTGCCCGGTTGTGGACAGCAAATCGCCAATCAGCGGCCAGCCAAGGGTTTGCGCCCACAGGGCAACTTGTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCAGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCGGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGa < 2:2327324/288‑1 (MQ=255)
cGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCCTTTCCACATTCC‑GCGGTTCAGCAACCGGGCAGTCGATATGGAc > 2:2227796/1‑288 (MQ=255)
cGGCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTG‑TTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGACt > 1:2309567/1‑288 (MQ=255)
ggCTGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGa < 1:1803519/286‑1 (MQ=255)
ggCTGCCCGGTTTGGGACAGCACAGCGCCCATCGCCGGCCAGCCGAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCGCTACCGCACACATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCTCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGACTc < 2:2695112/289‑1 (MQ=255)
cggCCCGGGTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGACTcc < 2:2744843/286‑1 (MQ=255)
tGCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGACTccc < 1:94448/288‑1 (MQ=255)
gCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACg > 2:1388020/1‑160 (MQ=255)
gCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACg < 1:1388020/160‑1 (MQ=255)
gCCCGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGc > 2:1131708/1‑176 (MQ=255)
ccGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCCCCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCCCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGCACcccccc > 2:2485001/1‑288 (MQ=255)
cGGTTTGTGACAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGc < 1:2705360/289‑1 (MQ=255)
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CACCAGGGCTGGCGTTTTTCTGCCGGATGCAGCTCCAGCCAGTCGGCAATATTGGCAATTAAGCGACGTCCGCGATGGTGTGCCGGATCAAGTCGCCCTTCAATGTCATCA‑ACAATCCAGTACTCTTCTGGTTCACAGCTTGCCTGCCATTGCAGGAGCCGTTTCCCCGTCAGGCTGCTTCCCAGTTGCACCACAATTTGCGCCTGCTGCAGCTCGCTGGTCGCTTTGGCATTGCCTAACCAAAGATCGGCACACGGCAGCGGCTGCCCGGTTTGACTCAGCACATCGCCAATCAGCGGCCAGCCAAGAGTTTGCGCCCACAGGGCAACTTTTTTGCCCTCTTCCGCACTCATGCGCCCGGCAACCACCACGCCGCGCTTTTGTCGCCAGAAGAACCAGTCGCGCTGTTTTTCACTTTCCAGACGAGGCGCTTCACGCAGCCACGGTTTGTCGTCCTGCCACCAGTCACCCAGACGCTGTTGCCAGCTAAGCCCGGTATCGTCCATTTCGCCATACA‑GCGGTTCAGCAAACGGGCAGTTGATATGGACTCCCCCCGC > CP042583/1949511‑1950067
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A