Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 613,159 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583613,1590AT99.6% 544.5 / NA 230intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (103/125);  minor base C (0/1);  total (104/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583613,1600CG99.6% 535.9 / NA 230intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (102/125);  total (104/126)
Fisher's exact test for biased strand distribution p-value = 4.52e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583613,1610TA99.6% 546.0 / NA 230intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (103/126);  total (104/126)
Fisher's exact test for biased strand distribution p-value = 4.52e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 230 total aligned reads displayed.

GTCGGGTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCACTA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCAGCTCATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGGCTAATGCTCAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAAACTCGTGCTAATGCTGATATCTCTCCAGTCA  >  CP042583/612880‑613435
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                   
  cGGGTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTg                                                                                                                                                                                                                                                                           <  1:991145/289‑1 (MQ=255)
   gggTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGt                                                                                                                                                                                                                                                                            >  1:759520/1‑287 (MQ=255)
   gggTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTg                                                                                                                                                                                                                                                                           <  1:282913/288‑1 (MQ=255)
      tAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTg                                                                                                                                                                                                                                                                        <  2:738781/288‑1 (MQ=255)
       aaGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGa                                                                                                                                                                                                                                                                       <  1:1413553/288‑1 (MQ=255)
       aaGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGAt                                                                                                                                                                                                                                                                      <  2:853400/289‑1 (MQ=255)
         gTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAg                                                                                                                                                                                                                                                                    >  2:1477912/1‑289 (MQ=255)
               catGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTAcc                                                                                                                                                                                                                                                               >  1:301934/1‑288 (MQ=255)
                    tCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCAc                                                                                                                                                                                                                                                         <  1:514527/289‑1 (MQ=255)
                                tGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGGGAAAGAACCGCTCCAGCTGCTGCTGCCGGAACTGTAATCACGGGCGGTATAGGGACCAGAAAGATCTCACTCACCCGC‑CTATCACTGGCGCTGACAGTCACCGCTCAcatc                                                                                                                                                                                                                                                      >  2:46428/1‑277 (MQ=255)
                                        tGGTAAGAGGAAAGCATGGGCACCACAGGAAGTCCAAAATGGTTGGTGTAGTCGTGATGGCCCTTAACCGGAATATGTGCCACGCTATCGGTGCTGACCCTCAGGCGTGGTTCATTGGTG‑GGGCGGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGACCCGATCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGAc                                                                                                                                                                                                                                     <  2:971468/289‑1 (MQ=255)
                                        tGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGAc                                                                                                                                                                                                                                     <  1:1625485/289‑1 (MQ=255)
                                          gTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACg                                                                                                                                                                                                                                    >  2:636748/1‑288 (MQ=255)
                                          gTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGa                                                                                                                                                                                                                                   >  1:1586480/1‑289 (MQ=255)
                                          gTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGa                                                                                                                                                                                                                                   >  2:1635874/1‑289 (MQ=255)
                                          gTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGa                                                                                                                                                                                                                                   >  1:1078126/1‑289 (MQ=255)
                                          gTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACCCACCCGCTGAA‑CTCAGTTGCTGATAGTTACCGCCACCCTGGGCTCAATTGTCCGGACgg                                                                                                                                                                                                                                   >  2:1746319/1‑288 (MQ=255)
                                          gTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTACTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCg                                                                                                                                                                                                                                                              <  2:238035/262‑1 (MQ=255)
                                           tAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGa                                                                                                                                                                                                                                   <  1:1477912/288‑1 (MQ=255)
                                           tAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGa                                                                                                                                                                                                                                   <  2:277466/288‑1 (MQ=255)
                                            aacgtgAACTCAACGGCACCACGGCAGTGCGAAAAGGGTTGCTGTAGTCGGGATTGCCCTGAAACGGTATATCTGACACGCCATCGGTGCTGTCCATCAGGCGTGGTTCATTGGTG‑GGGATGCGGCGATGCAATGTTGCAGCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGACATATGCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACGGCTCACCTGGGCTCCAGTGTCCGGACGATc                                                                                                                                                                                                                                 <  2:419614/284‑1 (MQ=255)
                                                ggAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTAAA‑CTCAGGTGCTGATAGTTACAGCTCACCTGGGCTCCATTTTCCGGACGACCGGAt                                                                                                                                                                                                                             >  2:221587/1‑289 (MQ=255)
                                                    aTCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCa                                                                                                                                                                                                                         <  1:1892979/289‑1 (MQ=255)
                                                          ggaaacaccGACATGCAAGAGTGGTTGGGGTTGGCAGGATTGCCCGAAACCGGAATACCGGCCAGGCCATGGGTGCTGACCTTCAGGAGTGGTTCATTGGTG‑GAGGTGCGGCGATGAGATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAATTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCgg                                                                                                                                                                                                                   <  2:196718/284‑1 (MQ=255)
                                                          ggCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCgg                                                                                                                                                                                                                   <  1:345259/289‑1 (MQ=255)
                                                          ggCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCgg                                                                                                                                                                                                                   <  1:1746319/289‑1 (MQ=255)
                                                                   gCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGc                                                                                                                                                                                                          <  1:1875187/289‑1 (MQ=255)
                                                                     aaTGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGccc                                                                                                                                                                                                        <  1:848684/289‑1 (MQ=255)
                                                                      ctGCCAAAAGGGTTGGGGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCAATCGGTACGGACCATCAGGCGTGGTTCAATGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGcccc                                                                                                                                                                                                       <  2:1012429/288‑1 (MQ=255)
                                                                      aTGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGcccc                                                                                                                                                                                                       >  1:1805412/1‑289 (MQ=255)
                                                                         ccAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCa                                                                                                                                                                                                      >  1:890232/1‑287 (MQ=255)
                                                                            aaaTGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTAt                                                                                                                                                                                                 >  1:1380192/1‑289 (MQ=255)
                                                                                   tggtGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACCTGCCCCAGCTATTACGATc                                                                                                                                                                                          >  1:1022013/1‑289 (MQ=255)
                                                                                      tgtAGTCGGGATTGCCCTGAACCGGAATATCTGCCACGCCCTCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCGGCTATTACGTTCAt                                                                                                                                                                                        <  1:1464705/288‑1 (MQ=255)
                                                                                                aTTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGa                                                                                                                                                                                                                                   >  2:1530685/1‑235 (MQ=255)
                                                                                                aTTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGa                                                                                                                                                                                                                                   <  1:1530685/235‑1 (MQ=255)
                                                                                                aTTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTg                                                                                                                                                                                                                           <  2:1031665/243‑1 (MQ=255)
                                                                                                aTTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCa                                                                                                                                                                                                                         >  2:604513/1‑245 (MQ=255)
                                                                                                aTTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCg                                                                                                                                                                             >  1:107256/1‑289 (MQ=255)
                                                                                                    cccTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTc                                                                                                                                                                          >  2:951581/1‑288 (MQ=255)
                                                                                                    cccTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCCCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTc                                                                                                                                                                          >  2:1577197/1‑288 (MQ=255)
                                                                                                         aaCCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGAGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCAGATAGTTACCGCTCACCTGGGCCCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgcc                                                                                                                                                                    >  1:1848464/1‑285 (MQ=255)
                                                                                                          aCCGGACTGTCGGCCCCGCCATCGGTGCTGACCATCCGGAGTGGGTCA‑TGGTGTGGGCGGCGGCGATGAAATGCTGAACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgac                                                                                                                                                                    <  2:981558/288‑5 (MQ=255)
                                                                                                          aCCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTTACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgac                                                                                                                                                                    <  1:1160097/288‑5 (MQ=255)
                                                                                                          aCCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgac                                                                                                                                                                    <  2:337869/288‑5 (MQ=255)
                                                                                                          aCCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGGTCATTGGTG‑GAGCTGCGGCGATGAAAGGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgac                                                                                                                                                                    <  2:1327810/288‑5 (MQ=255)
                                                                                                              gAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGAc                                                                                                                                                                                                              <  1:454341/242‑1 (MQ=255)
                                                                                                               gaaatCCGCCACGGCCTCGGCGGTCACCATCAGGCGTGGTTCATTGTTG‑GAGCTGCTGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGATCCAGCTGCTGCTGACGGAACTCTAATCACTGGCGGCATAGGTACCAGAAATATCCCACGCACCCGGTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCTGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                               <  2:1848464/285‑1 (MQ=255)
                                                                                                               aaTATCTGCCCCGCCATCGGAGCGGACAATCGGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAAGGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCGGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                               <  2:1904422/288‑1 (MQ=255)
                                                                                                               aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                               <  1:221587/288‑1 (MQ=255)
                                                                                                                   tCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTa                                                                                                                                                          <  1:636748/289‑1 (MQ=255)
                                                                                                                   tCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTa                                                                                                                                                          <  1:1038562/289‑1 (MQ=255)
                                                                                                                                     cTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTc                                                                                                                                                                                                                                                           >  2:1364225/1‑174 (MQ=255)
                                                                                                                                     cTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTa                                                                                                                                                          >  1:398556/1‑271 (MQ=255)
                                                                                                                                       gACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgacatg                                                                                                                                                                 >  2:1103309/1‑255 (MQ=255)
                                                                                                                                          cATGAGGGGTGGGTGAGTGGGG‑GGGCGGCGGGGATGAGATGGTGCACCAGATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCGGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGGTACCGCTCACCTGGGCTCGATTGTCCGGACGATCGGAGTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGc                                                                                                                                   <  2:1415329/289‑1 (MQ=255)
                                                                                                                                          cATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGc                                                                                                                                   <  2:890232/289‑1 (MQ=255)
                                                                                                                                             cAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGccc                                                                                                                                                                                                        >  1:238958/1‑217 (MQ=255)
                                                                                                                                                    ggTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTCTCGCTCCACGACATGCGGTGTATGGTGCTTTGGCGCCTGGTTTGCATGTCTTAg                                                                                                                          >  2:1147349/1‑288 (MQ=255)
                                                                                                                                                    ggTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTTCATGTCATAg                                                                                                                          >  1:395464/1‑288 (MQ=255)
                                                                                                                                                    ggTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAg                                                                                                                          >  1:1061922/1‑288 (MQ=255)
                                                                                                                                                    ggTTCATTGGTG‑GAGCTGCGGCGATG‑AATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGcc                                                                                                                        <  2:1279154/289‑1 (MQ=255)
                                                                                                                                                         aTTGGTG‑GAGCGGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAAcc                                                                                                                    <  2:1798666/289‑1 (MQ=255)
                                                                                                                                                          ttGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAAccc                                                                                                                   >  1:1355819/1‑289 (MQ=255)
                                                                                                                                                                        ggcgATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGc                                                                                                                                                    <  1:1906761/243‑1 (MQ=255)
                                                                                                                                                                        ggcgATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTAcc                                                                                                      >  2:566465/1‑289 (MQ=255)
                                                                                                                                                                         gcgATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCg                                                                                                     >  1:947562/1‑289 (MQ=255)
                                                                                                                                                                           gATGAAATGCTGAACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCAATGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGaa                                                                                                   <  1:1102215/289‑1 (MQ=255)
                                                                                                                                                                            aTGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAg                                                                                                  >  1:1570248/1‑289 (MQ=255)
                                                                                                                                                                             tGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTCTTACGTTCATCCAGCGTAGCGTTCTACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCTACCACCCTTCCCGAAgg                                                                                                 >  2:1049356/1‑289 (MQ=255)
                                                                                                                                                                                         ccATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAgcgaaatcg                                                                                     <  1:1714606/289‑9 (MQ=255)
                                                                                                                                                                                              ttGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAgcgaaatcgacaga                                                                                >  1:1299811/1‑276 (MQ=255)
                                                                                                                                                                                                    tGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgacat                                                                                                                                                                  >  1:1721174/1‑195 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                               >  2:1218745/1‑202 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                               <  1:1218745/202‑1 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCCTAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTg                                                                        >  2:1718859/1‑289 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTg                                                                        >  1:413835/1‑289 (MQ=255)
                                                                                                                                                                                                       ggTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTgg                                                                       <  1:980979/289‑1 (MQ=255)
                                                                                                                                                                                                                aCCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgac                                                                                                                                                                    >  1:954260/1‑183 (MQ=255)
                                                                                                                                                                                                                aCCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAAGCCGACCAACGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGATGTCGCGa                                                              >  1:501725/1‑289 (MQ=255)
                                                                                                                                                                                                                       cAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTAt                                                       <  1:811769/289‑1 (MQ=255)
                                                                                                                                                                                                                               gctgACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCtt                                                    <  2:1239783/284‑1 (MQ=255)
                                                                                                                                                                                                                               gctgACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAg                                               >  1:130802/1‑289 (MQ=255)
                                                                                                                                                                                                                                   agggtacggTAAGCGCTGTCGGACTAGGTACCAGAAAGACCCCGCTCACCCGCTGAA‑CTCAGGTGGTGATGGTTACCACTCACCTGGGCACCACTGTCCCGACGATCGGATTGCAGTCCGGCAGACAGGCCCCAGCTATTCCGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                           <  2:43061/281‑1 (MQ=255)
                                                                                                                                                                                                                                    cGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                           <  1:1006267/288‑1 (MQ=255)
                                                                                                                                                                                                                                       aaCTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCg                                        <  1:122761/288‑1 (MQ=255)
                                                                                                                                                                                                                                          tGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCTTAGCCAACCCGACCAACGTTACCGAAGGGTATCGAAATCGCAAGGTAAACCGTGTTGTCGCTGTCTTTTTCTTTGGTGTGGGTCGTAtt                                    >  2:1455190/1‑289 (MQ=255)
                                                                                                                                                                                                                                             aaTCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaa                                 >  1:1671546/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    ggcggcATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaatgacgtc                          >  1:324363/1‑282 (MQ=255)
                                                                                                                                                                                                                                                      cggcATAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTCGTCGCGATCTTTATCTCCGTAGTGGGTAGTATTGaatgacgtcga                        >  2:54941/1‑280 (MQ=255)
                                                                                                                                                                                                                                                          aTAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaatgacgtcgaaat                     <  1:1759161/288‑13 (MQ=255)
                                                                                                                                                                                                                                                          aTAGGTACCAGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGATGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaatgacgtcgaaat                     <  1:614675/288‑13 (MQ=255)
                                                                                                                                                                                                                                                                   aGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                           >  1:1155462/1‑257 (MQ=255)
                                                                                                                                                                                                                                                                   aGAAATATCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                           <  2:1155462/257‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tatCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCa      <  1:998674/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         atCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAg     <  2:301934/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         atCCCACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAg     >  1:1633633/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            ccACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCa  <  1:1263774/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ccACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCa  <  2:130802/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ccACTCACCCGCTGAA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTCa  <  1:566465/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                   
GTCGGGTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTG‑GAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCACTA‑CTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCAGCTCATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGGCTAATGCTCAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAAACTCGTGCTAATGCTGATATCTCTCCAGTCA  >  CP042583/612880‑613435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A