Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 613,159 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583613,1590AT99.6% 615.5 / NA 259intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (123/134);  minor base C (1/0);  total (125/134)
Fisher's exact test for biased strand distribution p-value = 4.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583613,1600CG99.2% 602.3 / NA 259intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (123/133);  minor base T (2/0);  total (125/134)
Fisher's exact test for biased strand distribution p-value = 2.34e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583613,1610TA99.6% 608.6 / ‑5.1 259intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (125/132);  minor base G (0/1);  total (125/134)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01

Only 100 of 259 total aligned reads displayed.

CGTCGGGTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCACTACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCAGCTCATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGGCTAATGCTCAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAAACTCGTGCTAATGCTGATATCTCTCCAGTCAC  >  CP042583/612879‑613436
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
cGTCGGGTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAg                                                                                                                                                                                                                                                                                <  1:373121/289‑1 (MQ=255)
 gTCGGGTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAgg                                                                                                                                                                                                                                                                               >  1:1941738/1‑289 (MQ=255)
  tCGGGTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGt                                                                                                                                                                                                                                                                              >  1:1004427/1‑289 (MQ=255)
               tcatGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGCTAGTTAcc                                                                                                                                                                                                                                                                 >  1:45511/1‑289 (MQ=255)
               tcatGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTAcc                                                                                                                                                                                                                                                                 >  1:1877680/1‑289 (MQ=255)
                catGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAGATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTAcc                                                                                                                                                                                                                                                                 >  1:941890/1‑288 (MQ=255)
                catGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTAcc                                                                                                                                                                                                                                                                 >  1:1585434/1‑288 (MQ=255)
                     tCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCa                                                                                                                                                                                                                                                           >  1:1990194/1‑288 (MQ=255)
                      cACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGt                                                                                                                                                                                                                                                                     >  1:675666/1‑278 (MQ=255)
                      cACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGt                                                                                                                                                                                                                                                                     <  2:675666/278‑1 (MQ=255)
                                     aGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTc                                                                                                                                                                                                                                           <  1:1720932/288‑1 (MQ=255)
                                         tGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGa                                                                                                                                                                                                                                       <  1:381823/288‑1 (MQ=255)
                                          ggTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCa                                                                                                                                                                                                                                                >  1:341764/1‑278 (MQ=255)
                                          ggTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGAc                                                                                                                                                                                                                                      <  2:258969/288‑1 (MQ=255)
                                           gTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGa                                                                                                                                                                                                                                    >  1:1196647/1‑289 (MQ=255)
                                           gTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGGCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACCCAGGTTCTGATAGGTACCTGCTC‑CCTGGGCCCCATTGTCCGGACGa                                                                                                                                                                                                                                    >  2:281992/1‑289 (MQ=255)
                                             aaCTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGAt                                                                                                                                                                                                                                   <  1:1292127/288‑1 (MQ=255)
                                                               ccaccGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGa                                                                                                                                                                                                                <  2:1884792/289‑1 (MQ=255)
                                                                    gCAATGCCAAAATGGTTGGTGTATGCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGc                                                                                                                                                                                                           <  2:84151/289‑1 (MQ=255)
                                                                    gCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGc                                                                                                                                                                                                           <  1:32621/289‑1 (MQ=255)
                                                                     cAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCTGGACGATCGGATTGCTGTCCGGCCGACATGc                                                                                                                                                                                                           >  2:1546438/1‑288 (MQ=255)
                                                                       atggcgaaaaGGGTGGTGTAGCGGAGATGGCACTGAACCGGAATATCTGCCAGGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCGAGCTGCTGCTGAAGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATAACCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGcccc                                                                                                                                                                                                        <  2:1658843/283‑1 (MQ=255)
                                                                          ccAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGAGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAACGAACCGCTCCAGCTGCTGCTGACGGCTCTGTAATCACTGGAGGAATAGGTATCCGTAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTGACC‑GCTCACCTCGGCTCCATTGTCCGAACGATCGGATTGCAGCCCGGCACCCATGccccgg                                                                                                                                                                                                      >  2:1601554/1‑286 (MQ=255)
                                                                                  gttgggGTAGGCGAGCTTGCCCTGAACCGGAATATCTGCCACGCCACCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGGTGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGGTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCGGCTATTACg                                                                                                                                                                                              <  2:390907/288‑1 (MQ=255)
                                                                                    tggtGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTc                                                                                                                                                                                           >  1:167500/1‑289 (MQ=255)
                                                                                        gtAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATc                                                                                                                                                                                        <  2:1990194/288‑1 (MQ=255)
                                                                                          aGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCa                                                                                                                                                                                      <  2:1941738/288‑1 (MQ=255)
                                                                                              gagaTTGCCCTGAACCGGAATATCTGCCACGCCATCGTTGCTGACCAGCAGGCGTGGTTCATTGGTGGATCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTa                                                                                                                                                                                 <  1:874081/289‑1 (MQ=255)
                                                                                                 aTTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGCCGATCGGATTGCAGTCCGGCCGCCATGCACCAGCTGTTACGTTCATCCCGCGtcacg                                                                                                                                                                              >  2:104338/1‑285 (MQ=255)
                                                                                                 aTTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGGCCGGACGATCGGATTGGAGTCCGGCAGACATGCCCCAGCTTTTACGGTCATCCAGAGTATCg                                                                                                                                                                              >  2:949518/1‑289 (MQ=255)
                                                                                                 aTTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCCATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACCCACCCGCTGAACTCAGTTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGCTCGGATTTCAGTCCGGCAGACATGCCCCAGCTAATACGTTCATCCAGCGTAtgg                                                                                                                                                                              >  2:51638/1‑287 (MQ=255)
                                                                                                     cccTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCCATTACGTTAATCCAGCGTCTCTTTc                                                                                                                                                                           >  2:322330/1‑288 (MQ=255)
                                                                                                      ccTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTAt                                                                                                                                                                                >  1:943940/1‑282 (MQ=255)
                                                                                                      ccTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTcc                                                                                                                                                                          <  1:1546438/288‑1 (MQ=255)
                                                                                                      ccTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTcc                                                                                                                                                                          <  2:1851013/288‑1 (MQ=255)
                                                                                                          aaCCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGACCGGATTGCAGTCCGGCCGACATTCCCCAGCTATTACTTTCATCCAACGTTTCCTTCCacgac                                                                                                                                                                     >  2:1671408/1‑285 (MQ=255)
                                                                                                             cGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgacatg                                                                                                                                                                  <  1:988088/289‑8 (MQ=255)
                                                                                                             cGGAAGATCTGCCAAGCCATCGGTGCTGACCATCCGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCacgacatg                                                                                                                                                                  <  2:348673/289‑8 (MQ=255)
                                                                                                                aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCa                                                                                                                                                                                      >  1:1525148/1‑266 (MQ=255)
                                                                                                                aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCa                                                                                                                                                                                      <  2:1525148/266‑1 (MQ=255)
                                                                                                                aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                <  1:1800431/288‑1 (MQ=255)
                                                                                                                aaTATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                <  1:828114/288‑1 (MQ=255)
                                                                                                                    tCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTc                                                                                                                                                                                                                       >  2:747174/1‑229 (MQ=255)
                                                                                                                       gCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                >  1:1869479/1‑281 (MQ=255)
                                                                                                                           cGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCt                                                                                                                                                    <  2:941890/289‑1 (MQ=255)
                                                                                                                                      cTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCg                                                                                                                                                                                                                                         <  2:1305013/193‑1 (MQ=255)
                                                                                                                                         aCCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACCTGCGGTGTATGGTGCTGTGGCTACTGtttt                                                                                                                                      >  2:388738/1‑289 (MQ=255)
                                                                                                                                         aCCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTa                                                                                                                                                           <  1:548363/268‑1 (MQ=255)
                                                                                                                                          ccATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTg                                                                                                                                     <  1:528090/289‑1 (MQ=255)
                                                                                                                                           cATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGc                                                                                                                                    <  2:233879/289‑1 (MQ=255)
                                                                                                                                              cAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCgg                                                                                                                                                                                                                    <  2:910382/206‑1 (MQ=255)
                                                                                                                                              cAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGTTGTGGCTACTGtgtgtcatg                                                                                                                                 >  2:528090/1‑281 (MQ=255)
                                                                                                                                              cAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATg                                                                                                                                 >  2:287454/1‑289 (MQ=255)
                                                                                                                                              cAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCCCCATTGTCCGGACGATCGGATTGCAGTCCGGCCGACATGCCCCAGCTCTTACGTTCATCCAGCGTATCGTTCCCCGACCTGCGTTGTATGGTGCTGTGGTGACTGtttgtcc                                                                                                                                   >  2:1232773/1‑283 (MQ=255)
                                                                                                                                                   gTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTTGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATAACCCACTCACCCGCTGAACTCAGTTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCCGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCGATTACGTTCATCCAGCGTATCGTTCCACGACATGCCGTGTATGGTGCTGTTGCTACTGTTTTGCATCTCATa                                                                                                                            >  2:1291759/1‑289 (MQ=255)
                                                                                                                                                   gTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTa                                                                                                                                                           <  1:281928/258‑1 (MQ=255)
                                                                                                                                                    tGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGGAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                <  1:1657112/252‑1 (MQ=255)
                                                                                                                                                     ggTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAg                                                                                                                           <  2:880650/288‑1 (MQ=255)
                                                                                                                                                       ttCATTGGTGGGGCTGCGTAGATGAAATGCTGAACCCAATTGGGTTGCGGTGGAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATGCCTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATCGTTACC‑GCTCCCCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGcc                                                                                                                         <  2:1762705/288‑1 (MQ=255)
                                                                                                                                                        tCATTGGTGGAGCTGCGGCTATGAAATTCTGCACCATATTGGGTGGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCaa                                                                                                                       <  2:126392/289‑1 (MQ=255)
                                                                                                                                                           ttGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTAACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCCATTACGTTCATCCAGCGTATCGTTACACGCCATACGGTGTAGGGTGCTGTTGCGACTGTTTTGCATGTACTAGCTAAccc                                                                                                                    >  2:635357/1‑289 (MQ=255)
                                                                                                                                                               tggAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGac                                                                                                                 <  1:62253/288‑1 (MQ=255)
                                                                                                                                                                 gAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGcc                                                                                                                         <  1:1162528/278‑1 (MQ=255)
                                                                                                                                                                 gAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGcc                                                                                                                         >  2:1162528/1‑278 (MQ=255)
                                                                                                                                                                 gAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGacca                                                                                                               >  2:1715032/1‑288 (MQ=255)
                                                                                                                                                                    cTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGt                                                                                                           >  1:1312420/1‑289 (MQ=255)
                                                                                                                                                                     tgaggcgATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGt                                                                                                           <  1:1950863/285‑1 (MQ=255)
                                                                                                                                                                          cgATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCg                                                                                                      <  2:113831/288‑1 (MQ=255)
                                                                                                                                                                            aTGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAg                                                                                                   >  1:1406483/1‑289 (MQ=255)
                                                                                                                                                                                            tatTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTcc                                                                                                                                                                          >  2:1497148/1‑202 (MQ=255)
                                                                                                                                                                                            tatTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTcc                                                                                                                                                                          <  1:1497148/202‑1 (MQ=255)
                                                                                                                                                                                            tatTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAgcgaaatcgaca                                                                                   >  1:1071539/1‑278 (MQ=255)
                                                                                                                                                                                            tatTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAgcgaaatcgaca                                                                                   <  1:1232809/289‑12 (MQ=255)
                                                                                                                                                                                            tatTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGAGCGGATTGCAGTCCGGCAGACATGCCACAGCTATTACGTTCATCCAGCGTATCGTTCCACGACCTGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACACGATCACCGTTACCGAAGGGGAgcgacatccaca                                                                                   >  1:1134198/1‑278 (MQ=255)
                                                                                                                                                                                              ttGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGGGTATGGTGCTGTGGCTATCGGTTTTCATGTCATAGCCAACCCGGCCACCGTTAACGAAGGGGaccgaaatcggtaga                                                                                 >  2:335326/1‑275 (MQ=255)
                                                                                                                                                                                              ttGGGGTGCGATCAAAGAACCGCTCCAGCTGCTGCAGACGGAACTGTCATCACTGGCAGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAgcgaaatcgacaga                                                                                 <  2:45511/289‑14 (MQ=255)
                                                                                                                                                                                               tGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCt                                                                                                                                                    >  2:1391304/1‑221 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGt                                                                                                                                                                                                                                                                     >  2:1612925/1‑102 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGt                                                                                                                                                                                                                                                                     <  1:1612925/102‑1 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTa                                                                                                                                             <  1:897999/221‑1 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTg                                                                         >  1:722658/1‑289 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTg                                                                         >  1:271236/1‑289 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGAAAGATAAATCTg                                                                         >  1:1420841/1‑289 (MQ=255)
                                                                                                                                                                                                      cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACCGTTTGGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTg                                                                         >  1:1984450/1‑289 (MQ=255)
                                                                                                                                                                                                           aaaGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATg                                                                                                                                                         <  1:518606/204‑1 (MQ=255)
                                                                                                                                                                                                                    atCCAGCTGCTGCTGACGAAACTGTAATCACTGGCGGCATAGGTACCAGCAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCtt                                                           <  2:1406483/288‑1 (MQ=255)
                                                                                                                                                                                                                     tCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCtt                                                           <  1:1906667/288‑1 (MQ=255)
                                                                                                                                                                                                                                 tgACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGt                                               <  1:1748425/288‑1 (MQ=255)
                                                                                                                                                                                                                                 ggtcGGAACGTTAATCACTGGCGGCATAGGTCACAAGAAGATCCCACTCACCCGCTGCAAGCATGTGCTTAGATGTAAC‑GCTCACCTGGCCTCCATTGTCCGGACGATCGAATTGCAGTCCTGGAGACATGCCCCAGCGATTACATTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGt                                               <  2:1083359/285‑1 (MQ=255)
                                                                                                                                                                                                                                    cGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                            <  1:1665932/288‑1 (MQ=255)
                                                                                                                                                                                                                                    cGGAACGGTAATCAATGGCGGCATAGGTACCAGAAAGTTCCCAAGCACCCGCTGAACTCGGGTGCTGATAGTTACC‑GCTCACCTGGGCTCGATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTggg                                            <  2:560013/288‑1 (MQ=255)
                                                                                                                                                                                                                                      aaaCTGTAATAACTGGCGGCAGAGGTACCAGAAAGATCCCACGCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATGGGCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGGGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTc                                          <  1:306229/287‑1 (MQ=255)
                                                                                                                                                                                                                                        aCTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTa                                       >  1:240612/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 aCTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                >  1:1492524/1‑159 (MQ=255)
                                                                                                                                                                                                                                                 aCTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaatgac                              >  1:1683493/1‑285 (MQ=255)
                                                                                                                                                                                                                                                   tGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCtt                                                           <  2:145156/258‑1 (MQ=255)
                                                                                                                                                                                                                                                           tAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCg                                                                                                                                                                <  2:584653/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                         atCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAg      >  1:151970/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          tCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGt     <  1:1045077/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            caaCTCACCCGCTGAACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCCTCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTGTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCGACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGATATCTCTCCAGTc    >  1:1386005/3‑288 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
CGTCGGGTAAGTCATTCATGTTCACCGCCACGGTGGAAGGCTGGTAACTGGAAATCAACGGCACCACCGCAATGCCAAAATGGTTGGTGTAGTCGAGATTGCCCTGAACCGGAATATCTGCCACGCCATCGGTGCTGACCATCAGGCGTGGTTCATTGGTGGAGCTGCGGCGATGAAATGCTGCACCATATTGGGTTGCGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCACTACTCAGGTGCTGATAGTTACC‑GCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCAGCTCATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGGCTAATGCTCAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAAACTCGTGCTAATGCTGATATCTCTCCAGTCAC  >  CP042583/612879‑613436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A