Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,795,014 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,795,014 | 0 | G | C | 98.9%
| 649.2
/ NA
| 278 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/3); new base C (133/142); total (133/145) |
| Fisher's exact test for biased strand distribution p-value = 2.49e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,795,015 | 0 | C | G | 98.9%
| 639.1
/ NA
| 278 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base G (132/143); total (133/145) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,795,016 | 0 | T | A | 99.3%
| 654.0
/ NA
| 278 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (133/143); minor base G (0/2); total (133/145) |
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 |
Only 100 of 278 total aligned reads displayed.
GACAGTCTGAGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGGCTAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCG > CP042583/1794738‑1795294
|||
gACAGTCTGAGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTg < 1:423571/289‑1 (MQ=255)
cTGAGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGtt < 2:1908059/285‑1 (MQ=255)
gTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGt < 2:604459/289‑1 (MQ=255)
tttCGGCGGGTTTCCGGGTGATTTTCCCAAAGCCTTTACGCTGTTTCACCGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGAACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCAGAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGt < 2:1263746/288‑1 (MQ=255)
tCGCCCGGTTTCAGGGTGCTTTTCTCCAAGCCTTTCAGCTGGTTCCCAGGGCGCCGCT‑TGCCAGCCCTCCCCTCCTTCCCCTCCCTCTCCCCTCCCCTCCCCCCCTCCCTCTTCCCTCTTTTCGTCCCCGTCACGCTGGCCGTCCCTTTGCCGTCACGCTTCCTGGTCGGCGCCCTCCTTTTCACCTCCCAGACGGTCCCAGTGGTGTAGCTCCGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCgg < 2:445146/289‑1 (MQ=255)
tCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCACCAAAATAACGCGAAGGGTATTTGTTCGGTTTGTCgg > 2:1317302/1‑289 (MQ=255)
tCGCCCGGTTTCAGGCTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCgg < 1:1150208/289‑1 (MQ=255)
gCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCa < 1:724426/289‑1 (MQ=255)
tttCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATtata < 1:1055314/288‑1 (MQ=255)
gTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGa < 1:934690/288‑1 (MQ=255)
tgtttttCTCACAGCCCTTCCGCTGTTTAACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 2:1615734/285‑1 (MQ=255)
tGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAcc > 1:982999/1‑289 (MQ=255)
tGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 1:1425304/288‑1 (MQ=255)
tGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 2:472054/288‑1 (MQ=255)
tGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTCCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 1:1573870/288‑1 (MQ=255)
tGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACGCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 1:1613694/288‑1 (MQ=255)
tGATTGTCTAAACGCCTTTAAGCAGTTTCACAGTGCGACTCA‑TGGAATGCGGCACATGCTGCAAGTACATCTGCACTACCTTGGCACCCTCGCGCTTAGCGGTGTTCGTCACCTGAGCGCTGGCAGTCACGTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGGGACGGTGAAAGGGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 2:240545/288‑1 (MQ=255)
aTTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATCCGGGCGACCgg > 1:1791158/1‑289 (MQ=255)
aTTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 2:1838604/286‑1 (MQ=255)
aTTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCgg > 1:1698768/1‑289 (MQ=255)
atttCGCAAAGCCCTTCTGGTGTTTCACAGTCCGTCTCC‑TGGCAGCCTTAGCCGCCTGCAAGTCTCTCTGCACTACCCTGGAACCCTCGGGCTTACGTGTGTTCGCAACCTGCACGATTGCAGTCACTTTGCCGTCACGCTTCACTGTCGGCTCAGAAAGTTTAACACAAGAGACTGTGAAAGTTGTGTAGCTCAGTCCATAGCCGGACGGATACAACTCCCCGTTAGCTTTATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGt < 2:1398392/288‑1 (MQ=255)
tcAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCa < 1:19120/289‑1 (MQ=255)
aagcgttccggttGTTTCACGTGGCG‑CTCATTGGAGGCCGTCACATCCTGCAAGTACATCGGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCGCTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt < 2:212660/277‑1 (MQ=255)
aaGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt < 1:804076/289‑1 (MQ=255)
tCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTgta > 2:661912/1‑289 (MQ=255)
tGTTTAACAGGGCGACTCA‑TGAAAGCCGTACCATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTgtagt < 2:1033918/286‑1 (MQ=255)
cccaGGGCGACTCA‑TCGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCggg < 1:1552356/287‑1 (MQ=255)
cacaGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCggg < 2:89599/289‑1 (MQ=255)
ggCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 1:1402460/255‑1 (MQ=255)
cGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGc < 1:1321125/250‑1 (MQ=255)
cGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATTTGc > 1:1170950/1‑288 (MQ=255)
aGCCGTCACCTCCCGCAAGTGACGCTGCACTACCGTGGCACCCTCGCGCTTACCGGGGTTCGTCACCGACACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTGTTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAAcg < 2:775199/288‑1 (MQ=255)
gTCACGTCCTGTAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTCTTCGTCACCTGCACGCTGGCATTCACTTGGCCGTCACGCGTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATATCGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGa < 2:575274/289‑1 (MQ=255)
tCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACCACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGAGACAGGTATTCAGATGGCTGTCGTACACCGGGCTCTGCCCGACAGCACGCGGGaa > 2:1733477/1‑289 (MQ=255)
tCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATTCGGGCGACCGGTATTCAGCTGGCTGTAGTACTACCGGCTCTTCCCGACCGAACGCGGCaa > 2:1235421/1‑289 (MQ=255)
cacaTCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGTCCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAg < 1:759276/289‑1 (MQ=255)
cAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTgg > 2:1545922/1‑288 (MQ=255)
cATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATCGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATAAGGGCGACCGGTAATCAGATGGCTGTAGTAAACCGGGAATGTCCGGACAGAAAGCTGGAAGGACCTTGCCAGCtt > 2:70228/1‑288 (MQ=255)
aTCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGc < 1:118551/289‑1 (MQ=255)
tGCCCTATCCTGGCACCCCCTCGCTTACCGGTGTTCGTCACCTGCACGCGGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCATAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGTATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGc < 2:861316/286‑1 (MQ=255)
gCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGa < 2:1421610/289‑1 (MQ=255)
cACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGAc < 1:47971/289‑1 (MQ=255)
ccGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAg < 2:1353938/220‑1 (MQ=255)
ccGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAg > 1:1353938/1‑220 (MQ=255)
gCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTaa > 2:1346134/1‑288 (MQ=255)
aCCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCg < 1:1062641/289‑1 (MQ=255)
cTCGCGCTTACCGTTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCa > 1:1848169/1‑289 (MQ=255)
cTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt > 1:849580/1‑212 (MQ=255)
cTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt < 2:849580/212‑1 (MQ=255)
cTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGa < 1:1391260/273‑1 (MQ=255)
cTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGa > 2:1391260/1‑273 (MQ=255)
cTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCa > 2:411305/1‑289 (MQ=255)
cTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCa > 1:322546/1‑289 (MQ=255)
tCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGTTTGTAATCGCCaa > 1:826689/1‑289 (MQ=255)
tCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCaa > 1:1088275/1‑289 (MQ=255)
cgcgCTTACGGGTGTGCGTCACCTGCTCGCGTGCATTCACTTTGCCGTCACGCGTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGATCAGCCCAGAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCaaa < 2:1719843/289‑1 (MQ=255)
gcgcTTACCGGTGTTCGTCACCTGCACGTTGTCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCAAATCAGAGACGGTGAAAGTGGTGTATCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAGATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAAc < 1:870640/289‑1 (MQ=255)
tgtTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGTCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGc > 1:1375692/1‑289 (MQ=255)
gtTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGc < 1:701313/288‑1 (MQ=255)
ttCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCaa > 1:1726306/1‑289 (MQ=255)
tCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACCATACACCGGCAAt > 1:1819503/1‑289 (MQ=255)
cTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGAAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACCACTGCAATTGCaat > 2:1780178/1‑286 (MQ=255)
tggtctcttgCAGTCACTTTGCCGTCACGCTTCATTGGCGGCGCAGAAAGTTTCACATCAGGGACGGTGAAAGTGGTGGAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTAc < 2:1562278/280‑1 (MQ=255)
ggaCGCTGGCAGTACCTTGGCCGTCACGCTTCATGGTCGGCGCGGAAAGTTTCACATCAGAGACGGTGAAAGGGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTAcc < 2:939321/287‑1 (MQ=255)
tttGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCa > 1:293352/1‑289 (MQ=255)
tGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCaa > 1:998891/1‑288 (MQ=255)
gTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAg < 2:501939/289‑1 (MQ=255)
aCGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAg > 2:373801/1‑286 (MQ=255)
aCGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAg < 1:373801/286‑1 (MQ=255)
cGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGtt > 2:515263/1‑288 (MQ=255)
gCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTc < 1:498022/289‑1 (MQ=255)
cGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCa < 1:896091/289‑1 (MQ=255)
ggCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTATACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAAGAATACAACAGCAATGGCATTACCGCCCTCAGGTCCCGCCATCCAGGTTTACacatacgcct > 2:1582462/1‑280 (MQ=255)
gcgcAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATc > 1:1582096/1‑289 (MQ=255)
gcgcAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATc > 2:1179321/1‑289 (MQ=255)
gcgcAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATc > 1:440762/1‑289 (MQ=255)
aaGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCCAACAATAACTCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCTCATAAACctg > 2:291958/1‑288 (MQ=255)
ttcaactCAGAGACGGTGAAAGTGGTTTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGAt < 2:1088275/283‑1 (MQ=255)
ttaccgtCAGAGACGGTGAAAGTGGTTTGGCTCAGTCCAGAGCCGAACGGATACAACGCCCCGTTAGCGTCATCAAAGTAACGCGAGGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGCTAGTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGAt < 2:741237/283‑1 (MQ=255)
ttCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAATTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGAt < 2:1698768/289‑1 (MQ=255)
gTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCAccagc > 1:517511/1‑288 (MQ=255)
gTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGGTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCAccagc > 1:619244/1‑288 (MQ=255)
tgtAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGAc < 1:243569/288‑1 (MQ=255)
tgtAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGAc < 2:904484/288‑1 (MQ=255)
gtAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAAACAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACg > 1:1756844/1‑288 (MQ=255)
tCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGt < 1:264475/288‑1 (MQ=255)
ccccTAGCCGAACGGATACAACTCCCCGTTAGCTTCATCAAAATACCGCGACGTGTATTGGTTCGCCTTGTCGGCATTATCCGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTCCCGCCTTCAGTCCCCACAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTtcatc < 2:327747/289‑1 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTtcatc > 1:1668371/1‑289 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATGGGCAGCTTGCCGGACGGGTTGTAAGCGCCAAACAATACATCGGCAATTGAATTACCGCCTTCAGTCACCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGCTCTTCTCTCACCAGCGCCACCGGACGCCCGTtcatc > 2:1799814/1‑289 (MQ=255)
aGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGCGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGCACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAAGAATACATCGGCAATTGCATTACCGCCTTCAGTACCCGCAAACCAGGATTCCAGACTGCCCACAGCCTGCTCATCTTCTTTCACCAGCGCCAGCGGCCGccctatctacacac > 2:972237/1‑277 (MQ=255)
gCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATcagcacc > 2:1577082/1‑289 (MQ=255)
cGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATcagcacc < 1:127300/287‑1 (MQ=255)
aaCGGATACAACGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATcagcaccagc > 1:1495431/1‑288 (MQ=255)
cGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCgg > 1:504092/1‑140 (MQ=255)
cGCCCCGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGttt > 1:1521920/1‑288 (MQ=255)
cGTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGt > 1:645208/1‑289 (MQ=255)
gTTAGCTTCATCAAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGATTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGGATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCCTCAGAAACAGCACCAGCGGTTTACCGGTg > 1:1503230/1‑289 (MQ=255)
atcaAAATAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCCAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCCTTCCCCAGCGCCAGCGGACGCCCGTTCATCAGCACAAGCCCCACAGATTTACCGGTGGCTTTccg > 2:1430330/1‑286 (MQ=255)
acaAAATAACGGGAGGGGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAgcg < 2:1521920/288‑1 (MQ=255)
aaaTAACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGcgccg < 1:1222676/289‑1 (MQ=255)
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GACAGTCTGAGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCA‑TGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAATAACGGCTAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCG > CP042583/1794738‑1795294
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A