Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,795,014 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,795,014 | 0 | G | C | 98.5%
| 628.3
/ NA
| 274 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/3); new base C (136/131); total (138/136) |
| Fisher's exact test for biased strand distribution p-value = 3.67e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,795,015 | 0 | C | G | 98.5%
| 629.1
/ NA
| 274 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (3/1); new base G (135/135); total (138/136) |
| Fisher's exact test for biased strand distribution p-value = 6.22e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,795,016 | 0 | T | A | 98.9%
| 631.4
/ NA
| 274 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/3); new base A (137/133); total (138/136) |
| Fisher's exact test for biased strand distribution p-value = 1.22e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 274 total aligned reads displayed.
GACAGTCTGAGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGGCTAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCA > CP042583/1794738‑1795296
|||
gACAGTCTGAGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTg > 1:783450/1‑289 (MQ=255)
gTCTGTGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTGTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGtt < 1:414328/287‑1 (MQ=255)
gTCTGAGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCg > 2:269280/1‑289 (MQ=255)
gTCTGAGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCg > 2:443874/1‑289 (MQ=255)
gTTTCGCCCGGTTTCAGGGTGATTTTCTCCAAGCCTGTCAGCTGTTGCACAGGGCGACTCATGGAAGCCGTCACCTCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGt < 2:803683/289‑1 (MQ=255)
gTTTCCCCCGGTTTAAGGGTGATTTTCTCCAACCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGt < 2:19588/289‑1 (MQ=255)
gCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCa > 1:185537/1‑289 (MQ=255)
cccGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCAt > 1:1459537/1‑289 (MQ=255)
ggTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCACATAGACGAACGGATACAACGCCCCGTTAGCTTCATAAAAATAAACCGC‑AGTGTATTTGTTAGCCTTGTCGGCATtat > 2:1352988/1‑289 (MQ=255)
ggTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCg > 1:1028409/1‑288 (MQ=255)
gTGATTTTGTCAAAGCCTTTGAGCTGTTTCACAGGGCGACGCATGGACGCCGTCACATCCTGCAAGTACATCTGCACTACCGGTGCAGCCTCGCGCTTACCGGTGTTCGGCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGAGGAGAAAGTTTCACATCAGAGACGGTGAAAGTGGAGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGc < 2:1585747/286‑1 (MQ=255)
tGATTTTCTCAAAGCCTTTCAGCTGTTTCGTCGGGCAACTCGCGGCAGTCGTCACCTCCTGCCAGTACCTCTGCACTACCGGGGCACCCTCGCGCTTACCGGTGTTCGTCAGCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATCGTCGCCGCTGAAAGTTTGACATCAGAGGCGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGGATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 2:532819/288‑1 (MQ=255)
tGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 1:1278346/288‑1 (MQ=255)
tGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGCGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 1:1394538/288‑1 (MQ=255)
tGATTGTCTCAAAGCCTTTCAGCGGTGTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACACCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc < 1:678490/288‑1 (MQ=255)
aggttttcaaaaGCCTTTCAGCTATTTTGCAGGGCCTCTCAGCGACACCGTCACCTCCTGCAAGTACATCTCCGCTACCGTGGCACCCTCGCTCTTACCGGTGTTCGTCACCTGCAAGCTGGCAGTCCCTTTGCCTTAACGCTGCATGGTCGGCGAAGAAAGTTTCACATCAGAGAAGTTGAAAGTTGTTTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGTTTCATCAGAAT‑AACGCGAATTGTATTTGTTCGGCTTGTAGGCATTATACGGGCGAcc < 2:1747337/279‑1 (MQ=255)
aTTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCgg > 1:620149/1‑289 (MQ=255)
tcAAAGCCCTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCCCATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCa < 1:206233/289‑1 (MQ=255)
atgCCTTTCCGCTGTTTCACAGGGCGACTCATGGAAGACGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt < 2:598409/287‑1 (MQ=255)
aaGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt < 1:118978/289‑1 (MQ=255)
aaGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt < 1:1713061/289‑1 (MQ=255)
aaGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt < 1:1766536/289‑1 (MQ=255)
aGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt < 2:1183446/288‑1 (MQ=255)
aGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt > 1:1183446/1‑288 (MQ=255)
ttCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCgg < 1:75608/248‑1 (MQ=255)
tCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGTCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACTGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTgta < 1:829546/289‑1 (MQ=255)
tGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTgtagt < 1:285088/286‑1 (MQ=255)
tttCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTgta > 2:1274234/1‑282 (MQ=255)
gctCACACAGCGCCTCATGCAACACGTGACCTCCTGCAAGGACGTGCGCACTACCCTGTCACCCTCCGGCTTACCGGTTTTCGTCACCTGGACGCTGGCGTTCACTTTGCCGTCACGCTTCATGGTCGTCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACAcc < 2:467730/287‑1 (MQ=255)
ggCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTg > 2:680467/1‑289 (MQ=255)
gCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGAt < 1:508341/285‑1 (MQ=255)
cGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGc > 1:566680/1‑288 (MQ=255)
cGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCggg > 1:839233/1‑289 (MQ=255)
gTCTCATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AATGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGa < 1:1890767/289‑1 (MQ=255)
gTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAACGTTTCACATCAGACACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGCTACAACGCCCCGTTCGCTTCATCAAATT‑AACGCCAATTGTATTTATTACGCTTGTCAGCATTAAACGGGCCACCGGTATGCAAATCGCTGTAGTACCCCGGGATCTGCCCCaccgaccgacgga > 2:1778240/1‑284 (MQ=255)
gTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCGGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGa < 2:1913460/289‑1 (MQ=255)
gTCACACCCGGCAAGTACATCGGCACGCCCGTGGCACCCTCGCGCTGACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCGTCATGGTCGGCGCAGAAAGTTTCACAGCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGa < 2:185537/289‑1 (MQ=255)
tCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCCTCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTTCCCGACAGAACGCGGGaa > 1:894436/1‑289 (MQ=255)
aTCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGAAATTGGCAGCTTg > 1:795625/1‑288 (MQ=255)
gCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGa < 2:566680/289‑1 (MQ=255)
gCACTACCGGGGCCCCCTCGCGCTTACCGGTTTTCGTCCCCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGa < 2:1067689/289‑1 (MQ=255)
cACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGAc > 2:795490/1‑289 (MQ=255)
tGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGAt > 2:1298506/1‑219 (MQ=255)
tGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATgg < 1:1749793/221‑1 (MQ=255)
tGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGCTCTGCCCGACCGAACGCGGGAAGGCCAGTGGCAGTTTGCCGGACGGGTTGTa > 2:1370426/1‑289 (MQ=255)
aCCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCg < 2:839233/289‑1 (MQ=255)
cTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCAGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGcga > 1:1645012/1‑287 (MQ=255)
tCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCaa > 2:1920794/1‑289 (MQ=255)
gcgcTTACCGGGGTTGGTCACCTCGCCGCTGGGAGTCACTTTGCCGGCACGCTTCAGGGTCGGCGCGGAAAGTTTAACATCAGGGACGGGGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGGTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAAc < 2:1033055/289‑1 (MQ=255)
gtTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGc < 2:618291/288‑1 (MQ=255)
gTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACCCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGAc > 2:744942/1‑255 (MQ=255)
tGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTAc < 1:1009134/289‑1 (MQ=255)
gCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTAcc < 1:433900/289‑1 (MQ=255)
gCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGGAATCGCCAACCAATACACCGGCAATTTCATTAc > 2:1122794/1‑288 (MQ=255)
gCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAg > 1:1615942/1‑289 (MQ=255)
gTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAg < 1:1805315/289‑1 (MQ=255)
cGCTTCATGGTCGGCGCAGAAAGTATCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGTTACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGAAATTGCCTTACCTCCTTCAGTCCCCGCAAACCCGGtt > 2:1476934/1‑288 (MQ=255)
tGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGaa > 2:319299/1‑288 (MQ=255)
cGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCa < 1:1920794/289‑1 (MQ=255)
ggCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCAt < 1:369960/289‑1 (MQ=255)
aaGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGcc < 2:759507/286‑1 (MQ=255)
aGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCctgct < 1:742620/289‑1 (MQ=255)
ttCACATCAGAGACGGGGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCGTCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACAGGTTGTAATCGCCAAACAATACATCGGCAAATGCATTACCGCCTTCAGTACCCTAGAACCAGGTTTCCAGAATCGCATCAGCatgctaa > 2:1879452/1‑286 (MQ=255)
tacccagctgagcCGGTTAAAGTGGTGTAGCTCAGCCCCTAGCCGAACGGATACGACGCCCCGTTAGCTTCATCAAGAT‑AACGCGATGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGAt < 2:1604867/280‑1 (MQ=255)
ggTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATAGGCACTTGCATTACCGCCTTCAGTCCCCGCACACCAGGTTCCCCGACTCGCATCGCCCCGCTATGCTTCTTTCAccag > 2:643168/1‑288 (MQ=255)
gTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGCCCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAGGGACATTGGCAGCTTGCCGGACGGGTTGTAACCGCCAAACAATACAACGGCAATTGCATTACCGCCTTCAGTCCCCGCACACCAGACTTTACGAATCGCATCAGCCTGCGGATCTTCTTTCAccagc > 2:573465/1‑288 (MQ=255)
gTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCCAACAATACATCGGCAATTGCATTACCGCATTTAGTCCCCGCAACCCAGGGTACCAGAATCAAATCAGCCTTCTGAATATCTTTCAccacc > 2:465979/1‑286 (MQ=255)
gtAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACg > 2:70949/1‑288 (MQ=255)
aGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGcc < 1:319299/288‑1 (MQ=255)
cTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAAGCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGCTTCCAGAAGCGCATCAGCCTGCTGATCTTCTTTCACCACCGCCAGCCGCCGccctt > 2:318481/1‑287 (MQ=255)
cAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGAc < 1:956191/281‑1 (MQ=255)
cAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTtc > 1:1081474/1‑289 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGAc > 1:460712/1‑89 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGTCTGCTGATCTTCTTTCACCAGCGCCAGCGTACGCCCGCtcat > 2:1198465/1‑288 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTtcatc > 1:1227547/1‑289 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTtcatc < 2:165231/289‑1 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTtcatc > 2:93905/1‑289 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTtcatc > 1:1450552/1‑289 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTtcatc > 2:1002691/1‑289 (MQ=255)
cccATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTtcat > 1:1123801/1‑288 (MQ=255)
aaCGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCATATGGCTGTAGTACACCGGGATCTGCCCGACAGAACCCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGGCAAACAATACATCGGCTATTGCATTACCGCCGTCAGTCCCCCCAAACCCGGCCTCCAGAATCGCAACCGCCTTCTGATCTTCTTTCACCACCGCCAGCTGACACCCGCTCACcacccccatc > 2:1139280/1‑286 (MQ=255)
aaCGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCTGGATCTGCCAGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGACTCGCATCAGCCTGCTGACCTACTTTCACCAGCGACAGCGGACGCCCGTACATcaccacaagc > 2:1055609/1‑288 (MQ=255)
aaCGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATcagcaccagc > 1:1652335/1‑288 (MQ=255)
aaCGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCCGCTGATCTTCTTTCACCAGCCCCACCGGACGCCCGTTCCAcagccccagc > 2:1687786/1‑288 (MQ=255)
aCGGATACACCGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTCGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACAGGTTGTAAGCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATcagcaccagcac < 1:1879452/289‑1 (MQ=255)
aCGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATcagcaccagcac < 1:70949/289‑1 (MQ=255)
cGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTAc > 1:1102252/1‑191 (MQ=255)
cGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTAc < 2:1102252/191‑1 (MQ=255)
aCAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCAt > 2:1414641/1‑225 (MQ=255)
aCAACGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCAt < 1:1414641/225‑1 (MQ=255)
cGCCCCGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAACCCAGGTTTCCAGAATCGCATCAGCCTGCTGATCCTCTTTCACCCGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCCGttt > 1:1300404/1‑288 (MQ=255)
ccccGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGTACGCCCTGTCATCAGCACCAGCACCAGCCGCTTAc > 2:409486/1‑288 (MQ=255)
ccccGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTAc > 1:595073/1‑288 (MQ=255)
cccGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAGTCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCg < 1:133677/289‑1 (MQ=255)
ccGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCAccagcgc < 1:1356224/245‑1 (MQ=255)
cGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGcaccagcaccag < 1:1286292/277‑1 (MQ=255)
cGTTAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGCTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTAACCAGCGCCAGCGGACGCCCGCTCATAAGCACCAGCACCAGCGGTTTACCGGt > 1:537754/1‑289 (MQ=255)
ttAGCTTCATCAAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGt > 2:1871108/1‑185 (MQ=255)
atcaAAAT‑AACGCGAAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCTCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTCCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAgc > 1:1582329/1‑289 (MQ=255)
caAAAT‑AACGCGTAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCGGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTTCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAgcgc < 1:573465/289‑1 (MQ=255)
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GACAGTCTGAGTTTCGCCCGGTTTCAGGGTGATTTTCTCAAAGCCTTTCAGCTGTTTCACAGGGCGACTCATGGAAGCCGTCACATCCTGCAAGTACATCTGCACTACCGTGGCACCCTCGCGCTTACCGGTGTTCGTCACCTGCACGCTGGCAGTCACTTTGCCGTCACGCTTCATGGTCGGCGCAGAAAGTTTCACATCAGAGACGGTGAAAGTGGTGTAGCTCAGCCCATAGCCGAACGGATACAACGCCCCGTTAGCTTCATCAAAAT‑AACGGCTAGTGTATTTGTTCGGCTTGTCGGCATTATACGGGCGACCGGTATTCAGATGGCTGTAGTACACCGGGATCTGCCCGACAGAACGCGGGAAGGACATTGGCAGCTTGCCGGACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCA > CP042583/1794738‑1795296
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A