Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,952,142 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,952,142 | 0 | A | T | 99.5%
| 520.7
/ NA
| 219 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (116/101); minor base C (0/1); total (117/102) |
| Fisher's exact test for biased strand distribution p-value = 4.68e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,952,143 | 0 | C | G | 99.5%
| 512.2
/ NA
| 219 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (116/102); total (117/102) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
| * | CP042583 | 1,952,144 | 0 | T | A | 100.0%
| 520.3
/ NA
| 219 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (117/102); total (117/102) |
Only 100 of 219 total aligned reads displayed.
GGTGTCGCCGGAATCTCTTGGCTCAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGACTTTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCACTAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAATGTGTGGGATACCATCTT > CP042583/1951864‑1952419
|||
ggTGTCGCCGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACTAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAACCTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGc > 2:972275/1‑289 (MQ=255)
tgtCGCCGGAATCTCTGGCGAGAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCt < 2:1898806/288‑1 (MQ=255)
ccGGAATCTCTTGCGACAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAACAAAAATGCAGTACCCCGGTGCAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCCACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGCACGTACGCACCAGCACGATCACCTCCCTGCTTCGCCCGATCGTAAAAACTCTCTCAAGCCTGGTCAAccc > 2:1847767/1‑288 (MQ=255)
ttgcgacAAATGGCGCTGTAGATTGTCCAGGGCCGTAGGAAGCGATTGCACGCGTACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTAATACAAAAAAAATGCAGTAGCCCGGTGTAGGGAGGTTTAAACGGGGTGGCAGAAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCTCACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTcaca < 2:1799452/283‑1 (MQ=255)
tgcgacAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTcaca > 1:1515354/6‑288 (MQ=255)
aaTGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCa > 1:182697/1‑288 (MQ=255)
tttCCAGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCAc > 1:1580546/1‑288 (MQ=255)
aGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCtt > 1:1675680/1‑289 (MQ=255)
aGCGCCGTAGTAAGTGATTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACCCGCtt > 1:20791/1‑289 (MQ=255)
tGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCACCGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCACCGCTTTTCCTGCACGCGCTTTCCGCTCAACATATTTCt > 2:1105976/1‑289 (MQ=255)
aCCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATcggcg < 1:148119/288‑1 (MQ=255)
tcCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCttt > 2:865284/1‑258 (MQ=255)
gTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCGGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATGTGCGGGAACGCCagg > 2:924786/1‑288 (MQ=255)
gTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAATCATCAGCACGATAAACTGCCTGCTTAGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACGCGTTTTTTCACATCAACCATCGCTTTTTTGGCACGCGCTTTCTGCTCAACTTATTTCTCATTGGTGGTGTCGctacg > 2:374363/1‑285 (MQ=255)
aaaGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAgagga > 1:133482/1‑288 (MQ=255)
tCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAggagcggagc < 2:1734501/289‑1 (MQ=255)
taCGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTc < 1:109340/289‑1 (MQ=255)
gggTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAgagg > 1:853659/1‑269 (MQ=255)
gggTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgt > 2:1328111/1‑289 (MQ=255)
ggTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCt < 2:1018221/235‑1 (MQ=255)
ggTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGTCAGAGGAGCGGCGCACCCCCTCCAggg > 2:463042/1‑287 (MQ=255)
ggTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgtg > 1:9028/1‑289 (MQ=255)
ggTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgtg > 1:744598/1‑289 (MQ=255)
ggTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgtg > 1:456948/1‑289 (MQ=255)
ggTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGG‑TTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgtgt > 2:1295363/1‑289 (MQ=255)
gTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTc > 1:1429067/1‑230 (MQ=255)
gTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTc < 2:1429067/230‑1 (MQ=255)
gTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAggagcggagc > 1:1123697/1‑275 (MQ=255)
gTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgtgt > 1:919654/1‑289 (MQ=255)
gTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgtg < 1:1011757/288‑1 (MQ=255)
gTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgtg < 1:1430150/288‑1 (MQ=255)
gTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgtg < 2:472507/288‑1 (MQ=255)
gTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCCAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGCTCGGCGGGATCGCCAGAGGAGCGGCGCACCCCTTCCAgtgt > 2:1647919/1‑289 (MQ=255)
aaaaaaTGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTaa > 1:499882/1‑288 (MQ=255)
cccaGGTATAAGGAGGTGTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCATCGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGgtcg < 2:671676/289‑1 (MQ=255)
cGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCa > 1:375408/1‑289 (MQ=255)
aGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGAt < 2:437563/288‑1 (MQ=255)
ggAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTCCCAGCCCAACGGCCGCGCCCCCACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATGGGCAGAGGAGCGGAGCAACGCTTCCAGGCGTTCACCAAGCAGCCGTC‑GGTCGTCATCggatcg > 2:377859/1‑284 (MQ=255)
gAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACgt > 1:1441283/1‑289 (MQ=255)
aGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCCCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACgtg > 1:801244/1‑289 (MQ=255)
ttttAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGTCCGACGAGCGGAGAACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTa > 1:244440/1‑288 (MQ=255)
ttttAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTa > 1:1815079/1‑288 (MQ=255)
ttttAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTa > 1:732227/1‑288 (MQ=255)
ttttAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACATCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTa > 1:971367/1‑288 (MQ=255)
aCGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCa > 2:1380499/1‑289 (MQ=255)
ggCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTGATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCaaa < 2:227174/289‑1 (MQ=255)
cGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGtt > 1:1875557/1‑243 (MQ=255)
cGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTc > 1:250419/1‑258 (MQ=255)
cGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTc < 2:250419/258‑1 (MQ=255)
gTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAgaggag < 2:1789033/221‑1 (MQ=255)
gTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGCCGTAATCGATACGTTTATCACAAAACTg > 1:940749/1‑289 (MQ=255)
aaCAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACa < 1:14021/289‑1 (MQ=255)
ccatgccTAGTACCCGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACAt < 2:919654/284‑1 (MQ=255)
tCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATtctc > 1:1775881/1‑289 (MQ=255)
ccTAGTCACAGCCCAACGGGCGCCCCCTCACCAAATCCTTTCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAACCCTGGCTAACCCGTTTTTTCACATCATCCCGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCg < 2:1678188/289‑1 (MQ=255)
cAGCCCAACGGACGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCAt < 1:115915/289‑1 (MQ=255)
aGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCTCATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTc > 1:1595151/1‑212 (MQ=255)
aGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCTCATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTc < 2:1595151/212‑1 (MQ=255)
aGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCt < 2:546841/163‑1 (MQ=255)
aGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCAtt > 1:884815/1‑289 (MQ=255)
aGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCAtt > 1:1273229/1‑289 (MQ=255)
aGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACCAAGCAG‑CGTCCGGTCGTCATCGATACGTGTATCACCAAACTGCTTAGACATTCTCGGTCTACAtt > 2:1491828/1‑289 (MQ=255)
gCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCCCCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGCTACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCAttt > 2:982703/1‑289 (MQ=255)
gCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGa < 2:1636968/266‑1 (MQ=255)
gCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGa > 1:1636968/1‑266 (MQ=255)
gCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCAttt > 2:830746/1‑289 (MQ=255)
cccAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGAt > 1:1351119/1‑246 (MQ=255)
cccAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCAttt > 1:174456/1‑288 (MQ=255)
aCGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTa > 1:1382847/1‑289 (MQ=255)
aCGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTa < 2:717981/289‑1 (MQ=255)
gcgcCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTaaa < 2:1633078/285‑1 (MQ=255)
gcgcCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAAcc > 2:1338639/1‑288 (MQ=255)
cgcCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTaaaa > 1:1699566/1‑285 (MQ=255)
cgcCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTaaaa > 1:1725515/1‑285 (MQ=255)
cccACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCa < 2:1457090/243‑1 (MQ=255)
cacaCCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCac < 2:519444/289‑1 (MQ=255)
acacCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCact < 2:1389638/289‑1 (MQ=255)
tCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGAt > 1:982972/1‑222 (MQ=255)
tGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATa > 1:293854/1‑219 (MQ=255)
tGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACaa > 2:951638/1‑289 (MQ=255)
tGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCCCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACaa > 2:1129275/1‑289 (MQ=255)
ggACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGc < 2:744598/289‑1 (MQ=255)
ggACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGc < 1:1414956/289‑1 (MQ=255)
aacACGATAAACTTCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCTTGGCTAACCCGTTTTTTCACATCAACCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATGTCTGATCGGCGGGATCGCCAGAGTAGCGGAGCACCCCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTcg < 2:1545838/287‑1 (MQ=255)
aGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACAAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTc > 1:1033066/1‑288 (MQ=255)
cACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAACCCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTcgcg > 1:1550342/1‑289 (MQ=255)
gATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTTTTGATTACGCCTGAATTACCTCGCGTg > 1:643450/1‑288 (MQ=255)
tAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCa > 1:53849/1‑289 (MQ=255)
cctgcTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAAt < 2:1515354/289‑1 (MQ=255)
cctgcTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAAt > 1:428250/1‑289 (MQ=255)
ctgcTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAAt < 1:1295363/288‑1 (MQ=255)
gcTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAAtgtg < 1:830746/289‑1 (MQ=255)
cTTCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAAtgtg < 1:1068248/288‑1 (MQ=255)
ttCGCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAAtgtgt < 1:620157/288‑1 (MQ=255)
gCCCGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGGCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAATGTGTGGGa > 2:204221/1‑289 (MQ=255)
cccGATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAgtg > 2:39031/1‑135 (MQ=255)
ccGATAGTAATAACTGTCTGAAGCATGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAATGTGTGGGATa < 1:924786/289‑1 (MQ=255)
gATAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAATGTGTGGGATAcc < 1:1905765/289‑1 (MQ=255)
tAGTAATAACTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCCCTTCCAGTGTTTCACTAAGAAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGCTATTCTCGTTTTCCATTTGCGTAAAACCTGTACATAACTATCGACACGGGATGTTGATTACTGCGGAATGTCTTCCGGTCCAATCCAAATGTGTAGGATAcaa > 2:1068248/1‑286 (MQ=255)
aataaCTGTCTGAAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAATGTGTGGGATACCAtctt < 1:592155/288‑1 (MQ=255)
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GGTGTCGCCGGAATCTCTTGGCTCAAATGGCGCAGTAGATTTTCCAGCGCCGTAGTAAGACTTTGCACGCGGACCTCTCCCTGTTAAAAGCCTCACATTATACGGGGTACTACAAAAAAAATGCAGTACCCCGGTGTAGGGAGGTTTTAACGGCGTGCCAGCAACAGTCCTAGTACCAGCCCAACGGCCGCGCCCACACCAATTCCTTGCCAGGGTTTTTCGTGGACGTAGTCATCAGCACGATAAACTGCCTGCTTCGCCCGATAGTAATAACTGTCACTAGCCTGGCTAACCCGTTTTTTCACATCATCCAGCGCTTTTTCTGCACGCGCTTTCAGCTCAACATATTTCTGATCGGCGGGATCGCCAGAGGAGCGGAGCACCTCTTCCAGTGTTTCACTAAGCAG‑CGTCAGGTCGTCATCGATACGTGTATCACCAAACTGATTAGACATTCTCGTTCTCCATTTGCGTAAAACCTGTCACTAACTATAGACAAGGGTTGTTGATTACGCCTGAATTACCTCGCGTGCCATCCCAATGTGTGGGATACCATCTT > CP042583/1951864‑1952419
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
