Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,968,560 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,968,560 | 0 | G | C | 99.5%
| 497.8
/ NA
| 214 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (90/122); total (90/124) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,968,561 | 0 | C | G | 99.1%
| 500.6
/ NA
| 214 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base G (90/122); total (90/124) |
| Fisher's exact test for biased strand distribution p-value = 5.10e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,968,562 | 0 | T | A | 99.5%
| 507.1
/ NA
| 214 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (89/123); minor base G (0/1); total (90/124) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 214 total aligned reads displayed.
CAGAAGCACGCATCGCACCCAGCAAGCTGTATTTGTTGTTACTACTCCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑GC‑TGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCGCTGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGGCTACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGACTTATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCACCTGCCCTGCCGTCAGTCCTTCGGCGATTTCA > CP042583/1968280‑1968841
|||
cAGAAGCACGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc < 2:788072/289‑1 (MQ=255)
aGAAGCACGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc < 1:295356/288‑1 (MQ=255)
aGAAGCACGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc < 1:486521/288‑1 (MQ=255)
cgacacGCACCCATCAACGAGTATTTGTTGTTATTTGACCAGACCGCAAACAGCACCGCGTACACCGCCAGACCTGCCATCATCAGGAATCACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAAGCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCaa < 2:487523/284‑1 (MQ=255)
cGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAGATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCaa > 1:1268779/1‑289 (MQ=255)
cGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCa > 2:87866/1‑289 (MQ=255)
cGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCa > 1:1402543/1‑288 (MQ=255)
cATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAac < 1:87866/289‑1 (MQ=255)
aCCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGtt < 1:673811/288‑1 (MQ=255)
cccAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAg > 2:124325/1‑289 (MQ=255)
cccAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAg < 2:1318457/289‑1 (MQ=255)
agcaacgagTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAGCAGCGAGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAg > 1:1782865/9‑289 (MQ=255)
agcaacgagTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGATCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATAGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCACCTGGACCGAACT‑CGCCCAGCCAACACGGTTAgtg > 2:349819/9‑286 (MQ=255)
aacgagTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACGGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTc < 1:1161142/281‑1 (MQ=255)
cgagTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTaa < 1:386024/286‑1 (MQ=255)
cgagTATTTGTTGTTACTTGACCAGCCCCCAAAACACCCCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTaa < 2:1014886/286‑1 (MQ=255)
gagTATTTGTTGTTACTAGACCAGCCCGCAAACAGAACCGCGTAAACCGCCATACCGGCCATCATCAGGAAGAACAAAAGCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACACTCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAAc < 1:1905664/287‑1 (MQ=255)
agTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACg > 1:65655/2‑289 (MQ=255)
tgttACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGaa < 2:1830283/289‑1 (MQ=255)
acttgaccAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAAc > 2:381752/7‑275 (MQ=255)
tgaccAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGAccc < 2:1468262/286‑1 (MQ=255)
gaccAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGCAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCca > 1:380240/3‑289 (MQ=255)
accAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAACGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGACCAGACCca > 2:775027/2‑288 (MQ=255)
accAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCAATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCca > 2:796672/2‑288 (MQ=255)
aGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAacac < 2:899592/252‑1 (MQ=255)
aGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAacac > 1:899592/1‑252 (MQ=255)
cccGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGa < 1:1542783/274‑1 (MQ=255)
cccGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGa > 2:1542783/1‑274 (MQ=255)
cACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGGCTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa < 2:65655/289‑1 (MQ=255)
cACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa > 1:374061/1‑289 (MQ=255)
aCCGCTTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa < 1:444852/288‑1 (MQ=255)
aCCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa < 1:443494/288‑1 (MQ=255)
aCCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa < 1:1840273/288‑1 (MQ=255)
ccGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCaaa > 2:1633044/1‑289 (MQ=255)
gcgTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTCAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTGGGTCCGTAACGGTTCTGCAACAGACCCAGACGGCCGCGTTCGCCACAg > 2:368715/1‑288 (MQ=255)
cAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTTACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCCTCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑TCCACAGCCAACACGGTTAGGTCCGGAACGGTTCTGGAACATGCCCCACAGGCAACGTTCGCCAAAGccccttcatcc > 2:1885327/1‑278 (MQ=255)
ccagCCATCATCAGGAAGAACAAAACACCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGccc < 1:512464/283‑1 (MQ=255)
ccATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCg < 2:1690764/284‑1 (MQ=255)
ccATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGt > 1:286538/1‑289 (MQ=255)
atcaGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACa > 1:1562502/1‑288 (MQ=255)
aaaCAAAATCCCGAGGTTAAGGGCGCCAACAACCCAACCCGGACTGACTGGAAAAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACcagc < 2:1197359/288‑1 (MQ=255)
ccGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcacca < 1:1366022/289‑1 (MQ=255)
cGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcaccac < 1:230211/289‑1 (MQ=255)
cGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCCCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcacca > 2:1776463/1‑288 (MQ=255)
cGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCCCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcacca > 1:996470/1‑288 (MQ=255)
ggCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGagg > 1:1019957/1‑287 (MQ=255)
ggCAACCACCCAACCCGGACTGACTGGCACAAGCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATg < 1:1834570/289‑1 (MQ=255)
cAACCTACCACCGCGGACTGATCGGACCAACCGCAAAGGCAAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTGTTTAAAGAACA‑TTTGGTTCATGTCCGCAACCAGCTGGAGCGAACC‑ACCCCAGCCAACACGGTTAGGACCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACGACCACCAGCAGGATCGCCACCGCTTTGAGGATGGt < 2:667903/289‑1 (MQ=255)
accCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTcagca > 1:120743/1‑289 (MQ=255)
accCAACCAGGAGTGACTGGAACAAACGCAAGGGCCAGCAGCAG‑‑AG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGACGACGCGATCCGAGAATTTCGGGATCCAGTCTACTGTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTcagca < 2:298484/289‑1 (MQ=255)
caccGGACTGACGGGCGAAATCGCAAAGGCAAGCAGAGG‑‑GG‑AGGAAAAGCCAAGGATCGGTGCCAGGGGAAAGATGACGGGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGAtc < 2:426966/287‑1 (MQ=255)
actgactgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGTCGTTCGCCAACGCTCATGAATGCCCCGCAGGTTACAACCACGCGCAGGAACACCACCGCTTTTCGGATGGTCAGCTGGATCTCAATc > 2:476190/1‑289 (MQ=255)
actgactgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAAt < 2:1348658/288‑1 (MQ=255)
actgactgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAAt < 1:1139336/288‑1 (MQ=255)
actgactgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATc > 1:474926/1‑289 (MQ=255)
actgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGACTGCCCCGCAGGTGCCAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCCGGATCTCAATCAGt > 2:1905626/1‑288 (MQ=255)
actgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTTAGGAAGGTCAACAGGACCTCAATCAGtt > 2:583021/1‑289 (MQ=255)
actgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCACGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGt > 2:872663/1‑288 (MQ=255)
actgGCACAATCGCAAAGGCCACCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGtt < 1:867348/289‑1 (MQ=255)
ctgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTc < 1:776092/289‑1 (MQ=255)
ctgGCACAATAGCAAAGGACAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGAAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATAACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGtt > 1:1492114/1‑288 (MQ=255)
acaATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtg < 1:1242827/289‑3 (MQ=255)
acaATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtg < 1:348831/289‑3 (MQ=255)
tCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc < 1:218957/136‑1 (MQ=255)
tCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc > 2:218957/1‑136 (MQ=255)
tCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtgata > 1:1082703/1‑283 (MQ=255)
tCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtgata > 1:1011609/1‑283 (MQ=255)
gcaaaaGGCGAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTGGATCATGTCCGCCACCAGCTGGAGCGAACC‑GCCCCAGCAAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtgatatc < 2:524821/286‑8 (MQ=255)
cGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtgatatc < 1:1326207/289‑8 (MQ=255)
aGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGGGCCAGGGGAAAGATGACGCGATCCGAGAATTTCGGTATCCAGTCTTCGTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACt < 1:1351862/289‑1 (MQ=255)
ccAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTc < 1:583021/287‑1 (MQ=255)
aggggagTAAAGGCAATCATCGGGGCGAGGGTAAAGAGGAGGCGATCCGAGAATTTCGGGATCCAGGCTTATTTAAAGAACA‑TGTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTtgtg < 2:1030906/282‑1 (MQ=255)
agcgaggTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTtgtg < 1:1744490/283‑1 (MQ=255)
agcagggTAAAGGCAATCATCGGTGACAGGGTAAAGAGGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTtgtg < 2:916472/283‑1 (MQ=255)
gcgaggTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTc > 2:178132/5‑138 (MQ=255)
gcgaggTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTtgtg > 1:480335/5‑287 (MQ=255)
tcatcGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCa > 1:604224/1‑289 (MQ=255)
tcatcGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCa > 2:1477283/1‑289 (MQ=255)
gTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTgaga < 2:1393242/277‑1 (MQ=255)
gTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTgaga > 1:1393242/1‑277 (MQ=255)
acAGGGTAAAGAGTGCGCTATCAGAGGATTTCGCGAACCAGTCTTCTTTAAAGTGCA‑TTGTGAGCATGTCCGCAAACAGCGGGAGCGAAAC‑GCCCCAGCAAACACCGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAACGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATgcgcg < 2:286538/288‑1 (MQ=255)
cAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATgcgcg < 1:1776463/288‑1 (MQ=255)
ggTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGAGGCGCgcca > 1:906876/1‑288 (MQ=255)
aaGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCgccagcca > 2:540079/1‑288 (MQ=255)
aaGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCGGGAGCGAACC‑GCCCAAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGccagccag < 2:249763/289‑1 (MQ=255)
tGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCAc < 1:250047/288‑1 (MQ=255)
gcgatccgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAg < 1:796672/280‑1 (MQ=255)
gcgatccgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAg < 1:963067/280‑1 (MQ=255)
gcgatccgagAATTTCGGGATCCAGTCTGCTTTAAAGAACA‑ATTTGAGCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAg < 1:978894/280‑1 (MQ=255)
gcgagccgggAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TGTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAg < 2:1082703/280‑1 (MQ=255)
tccgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAAt > 2:1405778/6‑212 (MQ=255)
cgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGc < 1:304949/286‑1 (MQ=255)
cgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGc < 1:421799/286‑1 (MQ=255)
tCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACAt > 1:1401186/1‑288 (MQ=255)
tcttctTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtg < 1:142035/202‑3 (MQ=255)
ttAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCAc < 1:1633044/289‑1 (MQ=255)
aGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCAcctg > 1:566273/1‑288 (MQ=255)
aacaa‑TTTTGATCAGGTCCGCAGCCACCGAGA‑GCGACCAGCAACATCCGACATGGTTAGGTCCGTAACGGTTCAGGAACTGACCCATCGGGGGAAGAGCGCCAAAGCGTCTGAATGCCGCGCAGGGGACAACAACCAGCAGGATCGACACCGCTTTGAGGATGGTCAGCGGGATCTCAATCAGTTCCGGTGATATCCGACTCATTGTTGTGCCTCCTTGCGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCAcctgcc < 2:1506189/285‑1 (MQ=255)
cA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCACAGCTCATGCATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGCTATCCAACTCATCGTTGTGCCTCCTTGACTTCCTCACGCTGCGCGCCAGCCACCACCCGACCAATGCCGGCCATACACATCGGCAAGCCCAcctgccct > 2:1797543/1‑288 (MQ=255)
cA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATAGGCAAGCCCAcctgccct > 1:1860997/1‑288 (MQ=255)
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CAGAAGCACGCATCGCACCCAGCAAGCTGTATTTGTTGTTACTACTCCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑GC‑TGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCGCTGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGGCTACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGACTTATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCACCTGCCCTGCCGTCAGTCCTTCGGCGATTTCA > CP042583/1968280‑1968841
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A