Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
559,726 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 559,726 | 0 | G | C | 100.0%
| 419.7
/ NA
| 182 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (102/80); total (102/80) |
| * | CP042583 | 559,727 | 0 | C | G | 99.5%
| 421.5
/ NA
| 182 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (101/80); minor base A (1/0); total (102/80) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
| * | CP042583 | 559,728 | 0 | T | A | 99.5%
| 430.5
/ NA
| 182 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (101/80); minor base C (1/0); total (102/80) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 182 total aligned reads displayed.
ATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCTCCCAGGCATGGGCACTGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGAACTAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCT > CP042583/559449‑560006
|||
aTCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGc > 1:1926353/1‑289 (MQ=255)
tcacacccgccgTGACGGGGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCg < 1:1035300/283‑1 (MQ=255)
cgTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTc > 1:1557233/1‑288 (MQ=255)
tGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAc > 1:697076/1‑288 (MQ=255)
gACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAcc < 1:1733245/288‑1 (MQ=255)
ttttCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat < 1:180086/288‑1 (MQ=255)
cAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtct < 1:1792485/289‑1 (MQ=255)
aGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAAACGAGCAATTTA‑CCCGCCAGCCCCCGCATATCCACCAGACCGATAGTCAAGGCGATGGGGGAGGTTTTCCCCAGGCtcctaacac > 2:350078/1‑281 (MQ=255)
gTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctct < 1:89893/287‑2 (MQ=255)
aTCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctctgagg > 1:294768/1‑283 (MQ=255)
aTCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctctgagg > 2:1160307/1‑283 (MQ=255)
gCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcggc > 1:1667413/1‑289 (MQ=255)
cccGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAc > 1:108602/1‑260 (MQ=255)
cccGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAc < 2:108602/260‑1 (MQ=255)
ccGTCGAGCAGATATGGCAGGGAAGGTACAAT‑GGAACTCCAGTCAAACTCGTACACTATTTGCCCCCCCTGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACCCAAACGCCAGCTTAATGGCGGTAAACGACTCCCAGGCATGGGCTTAGTAATCGCGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcggcg < 1:1183106/288‑1 (MQ=255)
cagTCGAGCAGATATGG‑AGGGGAAGCACAATGGGAACTCCACTAAAACTCGTAACTTATTGGCCCCCCGTGTGGCCAGCGAGGCGAACTTTAGGTACAACCGGCGTAATAGCCGGCGTAAAAAAAGCATTAACCAACAAACACGCCAGTGTAATGGCGGGAAGCGAATCCCAGGGATGGGCTGAGTAATGGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg < 2:166221/284‑1 (MQ=255)
cGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCggg > 1:532858/1‑289 (MQ=255)
tCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGCACTTTACGTTCAACCAGCGGCATCACCAGCATGATAAAAGCGTTAATCAACACCTACGCCAGCGGAATTGCGGTAAACGACCTCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGGCATATCGCCCAGACCGATAGCCGCGGCGTGGGCGGCTGTTTTCAACCGGGTCATCATCTCTGTATGCATCGGCggggc > 2:772503/1‑287 (MQ=255)
gcgggCAGATATGGAAGGAAAGGGACAAT‑GGAACCCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTAAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGa < 2:1083712/284‑1 (MQ=255)
atGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGGAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGGCGAGGCGATGGCGGAGTGTTTCAACAGGTTCATCCTCCCTGAGGTCATCGGCGGGCCGAAAA‑ggcca > 2:220708/1‑287 (MQ=255)
tgtcAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTAGGTTCAACCAGCTTCATCACCAGCAGGATAAAAGCTTTAATCAACACATACCCCAGCGTAATGCCGGTAAACGACTCCCAGGCATGGGCTGATTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGTTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGAt < 1:1828536/286‑1 (MQ=255)
ggaagggaCAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCAt > 1:695232/1‑289 (MQ=255)
gaagggaCAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCAtt > 1:493355/1‑289 (MQ=255)
gaagggaCAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCAACGGCGGGACGATAA‑CGCGATAAGCCtt > 1:1764525/1‑289 (MQ=255)
gaagggaCAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCCCTGAGGTCATCGGCGGGGCGATAACCGCGACAGGCAt > 2:177815/1‑289 (MQ=255)
gaagggaCAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGCTTTTCACCAGGTTCATCACCTCTGAGGTCATCGGCGGGGCGGTAA‑CGCGATAAGCact > 2:491030/1‑287 (MQ=255)
ggggaAAAG‑GGAACGCCAGACAAACTCGTACATTATTGCCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTAAACCAGCGTCATCACCAGAATGATAAAAGCGTTAAGCAACACGTACGCCAGCGTAAGGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTa < 2:236760/287‑1 (MQ=255)
agggaCAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTa < 1:1618296/288‑1 (MQ=255)
ggaCAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGCACGATAGTCGAGGCGATGGCGGAGTTGTTCACCAGGTTCATCCTCCCTGAGGTCATCGGCGGGACGAAAA‑CGCGATAAACAGTAGgc > 2:561879/1‑289 (MQ=255)
caaggtaaCGCCAGTAAAACTCTTACATTATTTTCCCACCAGGTGGCCAGGAAGGCCAACTTTACGTTCAACCAGCGTCATCACCAGAATGATAAAAGCGTTAATCAACACATACGCCCGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGgcag < 2:1565250/282‑1 (MQ=255)
aT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGcagcag > 1:236760/1‑289 (MQ=255)
aT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTAATCGGCGGGACGATAA‑CGCGATAAGCATTAGGcagcag > 1:1159365/1‑289 (MQ=255)
t‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGTTAAGCATTAGGCCCCAGt > 2:1265552/1‑289 (MQ=255)
agtCCGGTCAACCTCGTACATTTTTTGCCCCCCATTTTGCCAGGCAGGTGAACTTTACGTCACACCGGCGTAATAACCAGCAAGATAAAAGCGTTAATCAACCCATACGCCAGCGTAATGGCGGTAACCGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt < 2:1247981/287‑1 (MQ=255)
aCTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGAAGGCGGAGTTTTTCACCAGGTTCATCATCTCTGCGGTCATCGGCGGGCCGATAA‑CGCGATAAGCATTAGGCCGCAGTCCGt > 2:2797/1‑289 (MQ=255)
cTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATGAGCATTAGGCAGCAGTACGTa > 1:865728/1‑289 (MQ=255)
gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGGATCGAt > 1:747517/1‑289 (MQ=255)
gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTAAGGATAGAt > 1:1539939/1‑289 (MQ=255)
atCAAACTCGTCACTTTTTTGCCCCCCATGTAGCCGGGCAGGCGAACTGTACGTTCAACCAGCGTCATCACCAGAATGAAAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGAt < 1:1902222/288‑1 (MQ=255)
cAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTAATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGAt < 1:1252543/287‑1 (MQ=255)
accccGTACATAATTTGACCCCCATGTTGCCAGGCAGGCGAACTTAACGTTAAACCGGCGTCATCACCAGCATAAAAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTAA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGc < 2:1001765/285‑1 (MQ=255)
aaCTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACTCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGc < 2:1009452/289‑1 (MQ=255)
cGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑ttc > 1:1551472/1‑287 (MQ=255)
ttACCTTATTTGCCCCCAAAGTGGCCAGGCAGGGGAACTTTACGTTCAACCACGGTCAACACAGGAATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTC‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCg < 2:1114276/288‑1 (MQ=255)
acatattttGCACCCCAGGTTGCACGGCAGACGACCTATACGTTCAACCAGCGTAAACACACGCATGTAAAAAGCGTAAATCAACACCTACGCCAGCGTAATGGCGGAAAACGACTCCCCGGCATGGGCTAAGTAATCGACCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCgg < 2:606201/282‑1 (MQ=255)
ttGCCCCCAATTTTGCCAGGAAGCAAAATTTTCCGTTCAACCAGCTTCAACACCAGATTGAAAAAAGCTTTAATCAACAACTACCCCGGCGTAATGGCGGTAACCGACTCCCAGGCATGGGCTGAGTAATCGGGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCa < 2:294768/289‑1 (MQ=255)
gCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCCGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt < 2:1402821/263‑1 (MQ=255)
gCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt > 1:1402821/1‑263 (MQ=255)
gCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAg > 2:1550832/1‑288 (MQ=255)
gCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAAGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCCTATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTCCATCATCCCTGAGGTCCTCGGCGGGACGATGA‑CGGCAGAAGCATTAGTCACCAGGACGTTTGGATAAGCC‑TGCGGGAGTGTTAg > 2:351593/1‑288 (MQ=255)
gCCCCCCATGTTGCCAGGCAGACGAACTTTACGTTCAACCGGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAgg < 1:1229943/289‑1 (MQ=255)
cccccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGAAAAGCATTAGGCAGCAGGTAGTAACGAAAAGCCGTGC‑GTAGCGTCAGGc > 2:1758344/1‑288 (MQ=255)
ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCa > 1:1918928/1‑288 (MQ=255)
ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCAt < 1:20036/289‑1 (MQ=255)
ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGgcag > 2:985323/1‑239 (MQ=255)
ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGgcag < 1:985323/239‑1 (MQ=255)
caggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCa > 1:1939673/1‑289 (MQ=255)
aagagcaCTTTCCGTCCAACCGGAGTCATAACCAGAATGATAAAAGCGTTAATCAACACCTAAGCAACCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGGGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCa < 2:920424/282‑1 (MQ=255)
gAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑ttttt > 1:1707024/1‑289 (MQ=255)
cGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAgcg > 1:473341/1‑285 (MQ=255)
cAGCATGAAAAAAGCGTTAAGCAACACAAACGCCATCTTAATGGCGGTAAACGACTCCCAGGCATGGCCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATcgcg < 2:401599/289‑1 (MQ=255)
aGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGcc < 2:1797319/222‑1 (MQ=255)
tAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCCCTGAGGTCATCGGCGGGATGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑AGCGGTAGCGTCAGGCCCATCGCAAGCGCGGCAGTTTTTTTGCGCGC‑CGAGCGGCCCTGAATGGCGGcgcggg > 2:251903/1‑286 (MQ=255)
aaacggatgaaTCAACCAATACGCAAGCGTAATGGCGGTAAACGACTCCGAGGAATGGGCAGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGAACGATAGTCGAGGCGATGGCGGAGTGTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATATGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTAcc < 2:168690/280‑1 (MQ=255)
cGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCCCGGCC‑TTTTTTTTCCCTCTCGGCAGCCACTGAATCGCGgcgctcacccggt > 2:1753433/1‑279 (MQ=255)
tAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGGAACGATAAGCC‑TGCGGGAGCGCACGGCCCATCGCCCGCGCGGCA‑TTGTTTTTGCCTCGCGCCCGCGACTGACACGCAGCGCGCACCTTGTCGCa > 2:1143032/1‑289 (MQ=255)
aaTCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCAGCGGCGGGACGACAA‑CGCGATAAGCATTAGGCAGCAGTACGGATCGATAAGCC‑TGCGGTAGCGTCAGGACCATCGCCAGCCCGGCA‑GTGTGTTGCCCTCCCCGCACCGCCAGCATCGCGGGGCGTACCCGTTCGCa > 2:1936200/1‑288 (MQ=255)
aTACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGggcg > 1:1932807/1‑289 (MQ=255)
gCGAAATGGCGATAAACGACTCCCGAGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCACCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTaaa < 1:1375213/289‑1 (MQ=255)
cGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACAAGGGCGGCGGTAAAc > 1:1782185/1‑289 (MQ=255)
gTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGGACCTGGTCGCAAACACGGGCGGCGGTCAACa > 1:1858895/1‑289 (MQ=255)
gTAATGGCGGTAAACGACCCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTaaa < 1:721010/287‑1 (MQ=255)
tAATGGCGGTAAACGACTCCCAGGCTTGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGAGGATAA‑TCCCATCAGCATTAGGGATCATGACGTATCGGTAAGCC‑GTAGGTAGCGTCAGGCACATCGCGAGCGCGGCA‑TTTTTTTTCCCCCCGGGCAGGCACTGGATCCCCGGGCGGACCGGTTGCCAAATGCGGGCGGCGGGTAACAg > 2:120950/1‑289 (MQ=255)
aTGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGcc < 1:1265552/289‑1 (MQ=255)
ggtaaacgactcCCAGGCAT‑GGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAgg < 1:1012256/279‑1 (MQ=255)
gtaaacgactcCCAGGCATGGGCTGAGTAATCGGGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAgg < 1:1812650/280‑1 (MQ=255)
gtaaacgactcCCAGGCATGGGCTGAGTAATCGAGCAATTTC‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAgg < 1:2797/280‑1 (MQ=255)
gtaaacgactcCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTAACGATAAGCC‑CGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTTCCCTCGCCGCAGCGACTGCATCGCCGCCCGTACCTGTTCCCCAACCCGGGCGGCGGTAAAAAGCCCCAggg > 2:1642045/9‑288 (MQ=255)
gtaaacgactcCCAGGCATGGGCTGAGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCCATAAGGATTAGGCCGCAGTAGCTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTGTGCCCTCGCCGCAGCGACTGAACCGGTGCGCGGGACTGTTTGCGAAAACGGGCCGGGGGAAACAGGCCCCgg > 2:557451/9‑288 (MQ=255)
gggctgagTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGaa > 1:637499/8‑289 (MQ=255)
tgaggaagcgggaaTTTACCCCGCCTGCGCCGCGATAGCCACCAGACCGATAGTCGAGGCGGTGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTGATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGaaaaa < 2:1478371/276‑1 (MQ=255)
agTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGTGGCAGCGAACGAATCGCGGCGCGTACCTGTTCGCAACCACGGGCCGCGGTAAACAGCCCCAGGCCGCGCATGGAACAAAGGGAAAAcgg > 2:1874611/2‑287 (MQ=255)
agTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCCTGGATGAAAGGAAAAACTg > 1:883868/2‑289 (MQ=255)
agTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCCGCAGCGACTGAATCGCGGCCCGTACCTGTTCGCAAACACGGGCGCCGGTAAACAGCCCCAGGCAGAGCATGGATGCAAGGAAAAACTg > 2:1116889/2‑289 (MQ=255)
aacggagcgctttt‑CCCGCCGGGGCCGCCCTAGTCACCCGACCGATAGTCGAGGCGATGGGGGAGTTTTTCACCAGGTTCATCGTCGCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGaa < 2:1568498/278‑1 (MQ=255)
tCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTCCCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCCGGCCGACAACGGCTCAAAGGAAAAAcataatct > 2:1587466/1‑282 (MQ=255)
cAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGa > 1:1060898/1‑289 (MQ=255)
cAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGa > 2:651745/1‑289 (MQ=255)
cAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCAACGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAAACGCGGCGCGTACCTGGTCGCAAAACCGGGCGGCGGGAAACAGCCCCCGGCAGAGCCAGGATGAAAGGAAAAAccggaaatttggg > 2:807926/1‑277 (MQ=255)
ccccccTGCGCCCCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt < 1:1597019/289‑1 (MQ=255)
cccGCCGGCGCGGCCATATCCACCAGACCGGTAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt < 2:1858895/289‑1 (MQ=255)
tGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCt > 1:1640679/1‑289 (MQ=255)
tGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCt > 1:1325018/1‑289 (MQ=255)
tGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGAAGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGccg > 1:144653/1‑288 (MQ=255)
tGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCAACATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGGAAACAGCCCCAGGCAGAGCATGGAGGAAAGGAAAAACGGAACAATGGGAACCAGCCCGGc > 2:1482309/1‑287 (MQ=255)
tCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCCGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGATCGGCCTTAAACCACAtt > 1:1504600/1‑287 (MQ=255)
accaGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTTCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCCAACACCGGCGGCGGTCAACAGCCCCAGGCCGAGCATGGATGAAAGGAAAAAATGAATAATGGGGTCCAGCTTCGTCTTCAACcacctcccca > 2:1773243/1‑282 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAgcga > 1:791553/1‑162 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACggg > 2:1177240/1‑200 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACggg < 1:1177240/200‑1 (MQ=255)
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ATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAT‑GGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCTCCCAGGCATGGGCACTGTAATCGAGCAATTTA‑CCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGAACTAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCT > CP042583/559449‑560006
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
