Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 559,726 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583559,7260GC100.0% 561.4 / NA 238intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (129/109);  total (129/109)
*CP042583559,7270CG99.2% 547.7 / NA 238intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (126/109);  total (129/109)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583559,7280TA99.6% 557.7 / NA 238intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (129/108);  minor base G (0/1);  total (129/109)
Fisher's exact test for biased strand distribution p-value = 4.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 238 total aligned reads displayed.

TCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCTCCCAGGCATGGGCACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGAACTAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTT  >  CP042583/559450‑560003
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                     
 cACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCgg                                                                                                                                                                                                                                                                            <  1:1383414/289‑1 (MQ=255)
    tACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATACCCACCAGACCGATAGTCGAGGCGAGGGCGGAGt                                                                                                                                                                                                                                                                         >  2:1406712/1‑289 (MQ=255)
         ccgTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTAAACCAGCGTCATCACCAGCATGATACAAGCGTTAATCAACACATACGCCAGCGGAATGGCGGTAAACGACACCCAGGCATGGGCCGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATAACCCACAGACAGATCATCCAGGCGATGACGGAGtgtt                                                                                                                                                                                                                                                                      >  2:1604971/1‑287 (MQ=255)
            tGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAcc                                                                                                                                                                                                                                                                 >  1:2023089/1‑289 (MQ=255)
                    aTTTTCAGGGTGATCCCCAGCCCGTCGGGCGAATATGGCAGGGACGGGACTATGGAACTCCAG‑TCAAACGCGTACATTATTTCCACCCCATTTGGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCAGGATAAAAGCGTTACTAAACAAACACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGGGCAATTTCCCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                                                                         <  2:2187271/289‑1 (MQ=255)
                     ttttCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                                                                         <  1:2204200/288‑1 (MQ=255)
                     ttttCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                                                                         <  1:979515/288‑1 (MQ=255)
                     ttttCAGGGTGATAACAGGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TAAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                                                                         <  2:1219726/288‑1 (MQ=255)
                      tggcAGGGTGATACCGAGCCCGTAGAGCAGATATGGCAGAGAAGGAACAAGGAAACTCCAG‑TCAAACTCGTACATAATTTTCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCCACGGCATCACCAGAATGATAAAAGCGTTAATCCAAACATACGCCAGCGTAATGGCGGTAAACGTCTCCCAGGAATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcatca                                                                                                                                                                                                                                                       <  2:1492394/286‑1 (MQ=255)
                                aTCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGAAGGCGGGGTTTTTCACCCGGTTCCTCAtctctgag                                                                                                                                                                                                                                               >  2:784777/1‑283 (MQ=255)
                                aTCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACCCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctctgagg                                                                                                                                                                                                                                              >  1:459110/1‑283 (MQ=255)
                                         ccGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACCCGTACCTTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGCCTCCCAGGCATGGGCTGAGTAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg                                                                                                                                                                                                                                       <  2:1350756/286‑1 (MQ=255)
                                          cGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCggg                                                                                                                                                                                                                                   >  1:1176032/1‑289 (MQ=255)
                                           gTCGAGCAGATATGGCAGGGAAGGCACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATCTTGCCAGGCAGGCGAAATTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGa                                                                                                                                                                                                                                  <  1:403276/289‑1 (MQ=255)
                                                     tatGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAAcgcg                                                                                                                                                                                                                        <  1:1897835/289‑1 (MQ=255)
                                                       tGGCAGGGAAGGAACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCACGTGGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGAt                                                                                                                                                                                                                      <  1:1883476/289‑1 (MQ=255)
                                                        ggCAGGGAAGGGACAAGGGAACTCCAG‑TCAACTTCGTACATTATTTGCCCCCCATGTGGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGAt                                                                                                                                                                                                                      <  2:1234978/288‑1 (MQ=255)
                                                          cAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAAACGAGCAATGTACCCGCCTGCGCCGCCATAACCACCAGACCGATAGTCGAGGCGATGGCGGAGGTTTTCACCGAGGTCACAATCCCCGAGGTCATAGGCGGGACGCGAAGGCGTTAAg                                                                                                                                                                                                                   >  2:885123/1‑289 (MQ=255)
                                                             ggaggggaCAATGGAAC‑CCAGCTCAAACGCGTACATTTTTGGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATAATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCa                                                                                                                                                                                                                 <  2:1759377/288‑1 (MQ=255)
                                                              gaagggaCAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCAtt                                                                                                                                                                                                               >  1:1982412/1‑289 (MQ=255)
                                                                atgggataTGGAAACCAAG‑TCAATCTCGGACATTATGTACCCCCCATGTGGCCAGACGAGCGAACTGTACGTTCAACCAGGGTAACAACCAACACGATAAAATCGTTAATCAAAACCAAAGCACGGGTAATGGCGGTATACGACTCCCGGAAATGGGGTAGGAAATCTTGCAATTTCCCCGCCTGCGCCGCCATATCCACCAGTCGGGTAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTa                                                                                                                                                                                                              <  2:603912/281‑1 (MQ=255)
                                                                aggaaCAAGGGCACTCCAG‑TCAAACACGTACATTATTTGCCACCCAGGTTGCCAGGAAGGCGAACTTAACGTTCAACCAGGGTAATCACGAGCATGATAAAAGCGTTAATCAACACATCGGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCGGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTa                                                                                                                                                                                                              <  2:2356178/288‑1 (MQ=255)
                                                                  ggcaaaTGAAACCCCAG‑TAAAACTCTTAACATCTTTGCCCCCCATGTTGCCAGGCGGGCGAACTTTACGTTAAACCAGGTTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGCCTCCAAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAgg                                                                                                                                                                                                            <  2:2023089/284‑1 (MQ=255)
                                                                  ggaCAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAgg                                                                                                                                                                                                            <  1:826581/288‑1 (MQ=255)
                                                                  ggaCAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGgc                                                                                                                                                                                                           >  1:716893/1‑289 (MQ=255)
                                                                    aCAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGgcag                                                                                                                                                                                                         <  1:139073/289‑1 (MQ=255)
                                                                    aCAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCCATAAGCCTGAGggag                                                                                                                                                                                                         >  2:486304/1‑289 (MQ=255)
                                                                       aTGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGcagcag                                                                                                                                                                                                      >  1:672526/1‑289 (MQ=255)
                                                                       aTGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGcagcag                                                                                                                                                                                                      <  1:486304/289‑1 (MQ=255)
                                                                        tGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGt                                                                                                                                                                                                     >  1:928946/1‑289 (MQ=255)
                                                                             cTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTa                                                                                                                                                                                                >  1:276875/1‑289 (MQ=255)
                                                                                  g‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                                                                         <  2:442243/227‑1 (MQ=255)
                                                                                  g‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCCGAGGTCATCGGCGGGACGATAACCCGATAAGCATTTGGCAGCAGCACGTATCGac                                                                                                                                                                                           >  2:1545145/1‑288 (MQ=255)
                                                                                     cAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGAt                                                                                                                                                                                           <  1:413367/287‑1 (MQ=255)
                                                                                                  tctttGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTCCGCCGCCATACCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGTACTATGACGCTATCAGCATTATGACGCCGTACGTATCGACAAGCCTGCggatgcg                                                                                                                                                                            >  2:2625813/3‑284 (MQ=255)
                                                                                                  tattTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCg                                                                                                                                                                            >  1:1550368/1‑289 (MQ=255)
                                                                                                    tttGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTc                                                                                                                                                                          >  1:59394/1‑289 (MQ=255)
                                                                                                      tGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGAt                                                                                                                                                                                           <  1:949214/270‑1 (MQ=255)
                                                                                                          ccccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTCAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGc                                                                                                                                                                                       <  1:1427229/270‑1 (MQ=255)
                                                                                                            ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTATCGTCAGGCCCa                                                                                                                                                                   >  1:655851/1‑288 (MQ=255)
                                                                                                            ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCa                                                                                                                                                                   >  1:75555/1‑288 (MQ=255)
                                                                                                            ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCa                                                                                                                                                                   >  1:1115548/1‑288 (MQ=255)
                                                                                                             cATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCCGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTCATCGAGCAATTTACCCGCCTGCGACGCCATATCCCCCAGACCGATAGTCGACGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATAGGCGGGACGATAACGCGATAAGCCTTAGGCAGCAGTACGTATCGATATGCCTCGGGTAGCGGCAGGCCCacc                                                                                                                                                                 >  2:1100737/1‑287 (MQ=255)
                                                                                                                     caggcaggCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGGGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAAGCGAGCAATTTACCCGCCTGCACCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAgcg                                                                                                                                                         <  1:465125/288‑1 (MQ=255)
                                                                                                                       ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGt                                                                                                                                                                                                 >  1:1235166/1‑247 (MQ=255)
                                                                                                                       ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCgg                                                                                                                                                      >  1:18013/1‑289 (MQ=255)
                                                                                                                            gcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGGAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGCTAACGCGATAAGCATTAGgcagca                                                                                                                                                                                                       >  1:994244/1‑236 (MQ=255)
                                                                                                                                      cGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGGATTAGGCAGCATTACGTACCGATAAGCCTGGGGTAACGGCAGGCCCCTCTGCCCG‑GCGGCATTTTTTTTCCCt                                                                                                                                        >  2:2110654/1‑288 (MQ=255)
                                                                                                                                           aaCCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                                                                         <  1:2436974/171‑1 (MQ=255)
                                                                                                                                           aaCCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                                                                         >  2:2436974/1‑171 (MQ=255)
                                                                                                                                                   tcatcaCCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCAATAGGCAGCAGTACGTATCGATAAGCCTGCCGTAGCGTCCGGCCCATC‑GCCATCCGGGCATTTTTTTGCCCCGCCGGCAgcgactg                                                                                                                          >  2:1345132/1‑283 (MQ=255)
                                                                                                                                                        cccAGCAGAATAAAAGCGTTAACCACACCCTACGCCAGCTTAATGGCGGTAAACGACTCCCGGGAATGGGCTGAGGAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATcg                                                                                                                     <  2:18013/288‑1 (MQ=255)
                                                                                                                                                        aCCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCAttttt                                                                                                                                               >  1:2146271/1‑263 (MQ=255)
                                                                                                                                                             cATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATTTCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCAttttttt                                                                                                                                             >  1:1145549/1‑260 (MQ=255)
                                                                                                                                                             cATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATTTCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCAttttttt                                                                                                                                             <  2:1145549/260‑1 (MQ=255)
                                                                                                                                                              aTGATAAAACCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCgcggc                                                                                                                 <  1:1065856/287‑1 (MQ=255)
                                                                                                                                                                  tAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGgcagca                                                                                                                                                                                                       >  1:2155297/1‑198 (MQ=255)
                                                                                                                                                                  tAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGGACGTATCGATAAGCCCTCGGTAGCGTCAGGCCCATC‑CCCAGCGCGGCATTTTTTTGCCCTCTCGGCAGCGACTGAATCGCGGCCCGtg                                                                                                            >  1:1012424/1‑287 (MQ=255)
                                                                                                                                                                           tAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑a                                                                                                 >  1:2072420/1‑289 (MQ=255)
                                                                                                                                                                                   acaTACGCCAGCGTAATGGCGGTAACCGACTCCCAGGCATGGGCGGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACggg                                                                                         <  1:213543/289‑1 (MQ=255)
                                                                                                                                                                                   acaTACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACggg                                                                                         <  1:1361623/289‑1 (MQ=255)
                                                                                                                                                                                        cGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGgcggcg                                                                                    <  1:1454354/289‑1 (MQ=255)
                                                                                                                                                                                         gCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGAGAAGCCTGCGGTAGCGGCCGGGCCATC‑GCCAGCCGGGCCTTTTTTTGGCCCCGCGGCCGCCGCCGAAATCCGGCGCGGACCCGTTCGC‑CAACACGGGcggcgg                                                                                   >  2:799169/1‑289 (MQ=255)
                                                                                                                                                                                          ccAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGt                                                                                  >  1:1593398/1‑289 (MQ=255)
                                                                                                                                                                                            aGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATcg                                                                                                                     <  2:717338/253‑1 (MQ=255)
                                                                                                                                                                                              ggTAAGGGCGGTAACCGCCTCCCGGGCAGGGGTTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTaaa                                                                               <  2:1387378/287‑1 (MQ=255)
                                                                                                                                                                                              cGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                                                                         >  2:948617/1‑120 (MQ=255)
                                                                                                                                                                                              cGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGgcag                                                                                                                                                                                                         <  2:137487/168‑1 (MQ=255)
                                                                                                                                                                                              cGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGt                                                                                                                                                                                                     <  1:795941/172‑1 (MQ=255)
                                                                                                                                                                                              cGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCCGGCCCATC‑GCCCGCGCGGCATTTTTTTTCCCTCGCGGCAGCGACTGAAACGCGGCGCGTACCTGTTCGC‑AAACCCCGGGCGCGGGaaaa                                                                              >  2:1529164/1‑288 (MQ=255)
                                                                                                                                                                                              cGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCAATAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGGCAGGCCCATC‑GCCAGCGCGGCCTTTTTTTGCCCCCGCGGCACCGACCGAATCGCGGGGCGTACCCTTTCGCAAAACCCGGGCGG‑GGTaaaa                                                                              >  2:2261451/1‑288 (MQ=255)
                                                                                                                                                                                               gTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACa                                                                             >  1:564974/1‑289 (MQ=255)
                                                                                                                                                                                                   tGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGAAAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCCTTTTTTTGCCCTCCCGGCAGCGACTGAATCGCGGCGCCGACCCGTTCGC‑CACACCGGGCCGGGGGAAACacgc                                                                          >  2:975096/1‑285 (MQ=255)
                                                                                                                                                                                                              gactcCCAGGCATGGGCTGAGAAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCa                                                              <  1:2636832/287‑1 (MQ=255)
                                                                                                                                                                                                                ctcCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGAt                                                                                                                                                                                           <  2:1045003/164‑1 (MQ=255)
                                                                                                                                                                                                                      ggCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGgca                                                                                                                                                                                                          >  2:1879743/1‑143 (MQ=255)
                                                                                                                                                                                                                      ggCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGatgaa                                                      >  1:1677938/1‑285 (MQ=255)
                                                                                                                                                                                                                        cATGGGCTGAGTAATCGAGCAATTTACCCGCATGCGCCGCCATATCAACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GTCAGCGCGGCATTCTTTTGCCCTCGCGGCAGCGACTGAATCGAGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTCAACATCCCCAGGCAGAGCCTGGatgaaag                                                    >  1:2351594/1‑283 (MQ=255)
                                                                                                                                                                                                                            ggctgagTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGAt                                                                                                                                                                                                                      <  1:530757/119‑1 (MQ=255)
                                                                                                                                                                                                                            ggctgagTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGAt                                                                                                                                                                                                                      >  2:530757/7‑125 (MQ=255)
                                                                                                                                                                                                                            ggctgagTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGcagcag                                                                                                                                                                                                      >  2:41095/7‑141 (MQ=255)
                                                                                                                                                                                                                             gctgagTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGaaaa                                               >  1:90744/6‑289 (MQ=255)
                                                                                                                                                                                                                                gattAAACGAGCAATTTACCCGCCGGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATTGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACt                                            <  1:628219/286‑1 (MQ=255)
                                                                                                                                                                                                                                 agTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGGAAACAGCCCCAGGCCGAGCCTGGATGAAAGGAAAAAcgg                                           >  1:1289573/2‑287 (MQ=255)
                                                                                                                                                                                                                                   tAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGaa                                         <  1:2110654/289‑1 (MQ=255)
                                                                                                                                                                                                                                           cAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGGCAGGCCCATC‑GCCAGCGCGGCCATTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑CAACACGGGCGGCGGTAAACAGCCCCAGGCAGCGCACGGATGAAAAGAAAAACTGAATATTgggc                                 >  2:2706113/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  cccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt                          <  2:1176032/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  cccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt                          <  1:1516925/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  cccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt                          <  1:2261451/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  cccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt                          <  2:2154978/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  cccGCCTGCGCCGCCATAGCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCAGCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGTAAAAACTGAATATTGGGATCCAGCt                          <  1:2371534/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  cccGCCGGCCCCGCCATATCCACCGGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGGTAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt                          <  1:2120081/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   ccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCAGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTc                         >  1:335210/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         caGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGCGGATAACGCGATTAGCATTAGGCTGCAGTACGTATCGATAAACCTGGGGTAACGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTACACTCGCGGCGCCGACCGAATTGCGGCGCGTAACTGTTAGC‑AAACCCGGCAGGCGGCAAAAAGCCCCCTGCAGAGCCAGGGAGAAAGGAAAAACGGAACATTGTGAACCATTACGGACCTCAAGCACATGCCGAtt   >  2:2301427/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         caGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAgg                                                                                                                                                                                                            <  1:1031583/90‑1 (MQ=255)
                                                                                                                                                                                                                                                                         caGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGAtt   >  1:190612/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          aGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGACAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑CCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGCTTGC‑CAACACGGGCCGCGGTAAACACCCCCACGCCGAGCGTCGGTCAAAGGAAAAACTGACTATTTGGACCCAGCCCGAGCTTAAACCCCCTCACGAttt  >  2:2149659/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAgg                                                                                                                                                                                                            <  1:1608189/87‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAgg                                                                                                                                                                                                            >  2:1608189/1‑87 (MQ=255)
                                                                                                                                                                                                                                                                              cGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACa                                                                             <  2:659535/210‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                     
TCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAG‑TCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCTCCCAGGCATGGGCACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATC‑GCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTCGC‑AAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGAACTAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTT  >  CP042583/559450‑560003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A