Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 604,683 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583604,6830GC99.6% 539.3 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (119/110);  total (120/111)
Fisher's exact test for biased strand distribution p-value = 4.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,6840CG99.1% 528.0 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base G (120/107);  total (120/111)
Fisher's exact test for biased strand distribution p-value = 2.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,6850TA99.1% 542.3 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (120/108);  minor base C (0/2);  total (120/111)
Fisher's exact test for biased strand distribution p-value = 2.28e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 231 total aligned reads displayed.

CAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATGCTCTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATGCTGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CGCTCCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGACCCCACGTTACCCGCCG  >  CP042583/604407‑604957
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                
cAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTc                                                                                                                                                                                                                                                                        <  2:1584064/289‑1 (MQ=255)
cAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTc                                                                                                                                                                                                                                                                        <  1:269725/289‑1 (MQ=255)
        cacCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGTCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAg                                                                                                                                                                                                                                                                >  2:1247355/1‑289 (MQ=255)
           cGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                   <  2:254184/283‑1 (MQ=255)
              acaGAATAACTGCGAAGGCATTAATCGACCGGAACAGCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTAGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCA‑AATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCAAGAACAGTATGGTa                                                                                                                                                                                                                                                         <  2:654788/289‑1 (MQ=255)
                  cATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATc                                                                                                                                                                                                                                                      >  1:1037049/1‑289 (MQ=255)
                   aaaactcggAAGGCATTAATCGACTGGAACATGCCGGTCGGAACGGTATAACCAAACATATGGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                       <  2:1717031/279‑1 (MQ=255)
                   aTAACTGCGACAGCATTAAGCGACTGGAAGTACGCGGTCGGAACGGATTAACGAAACATGTCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTGGTGAGAAGGCCCAGAACAACATACTGCAGAAGGTGAGCGTCACAAGCAGCCCCAGCTCCGTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATGTTTGCCAGTACACCCGGGCCAATAATAGTCGCGACAATTGAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                       <  2:1425700/287‑1 (MQ=255)
                   aTAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                       <  1:1699422/287‑1 (MQ=255)
                   aTAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                       <  1:254738/287‑1 (MQ=255)
                       cTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                   >  1:400686/1‑271 (MQ=255)
                       cTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGc                                                                                                                                                                                                                                                 >  1:455785/1‑289 (MQ=255)
                          cGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACAACAATGCCAATAATAGTCGCGACAATTAAGGCGTAAA‑CCGACCACCCTTTCCAGAACAGTATGGTAATCAGTTCAgg                                                                                                                                                                                                                                              >  2:783816/1‑289 (MQ=255)
                            aaGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCg                                                                                                                                                                                                                                            >  2:810002/1‑289 (MQ=255)
                                         actGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGGGCCAATTAAGGCGTATA‑CAGACCACTCTTTCCAGAACAGAATGGTAATCAGGGCAGGCGTTCCCACatgcag                                                                                                                                                                                                                               >  2:1442939/2‑289 (MQ=255)
                                               aCATCGGGGTCGGAACCGTATAACCAAACATAGCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAAGCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACcag                                                                                                                                                                                                                         <  2:728796/289‑1 (MQ=255)
                                               aCATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACcag                                                                                                                                                                                                                         <  1:1892732/289‑1 (MQ=255)
                                                 atacaggTCGGAACCGTATAACCAAACATGTCGCGGTTACCGAAACGGTCGATAAAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACcagca                                                                                                                                                                                                                       <  2:525105/284‑1 (MQ=255)
                                                   cgcgGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACcagcag                                                                                                                                                                                                                      >  1:1745445/1‑288 (MQ=255)
                                                                      ccAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                   >  1:1627080/1‑224 (MQ=255)
                                                                         aaCATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAACTTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCTTATA‑CCGACCACTTTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACACACACCCCACCCCACTCCGGCCGGAGaa                                                                                                                                                                                               >  2:1643107/1‑289 (MQ=255)
                                                                         aaCATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGa                                                                                                                                                                                                                              >  2:1287414/1‑258 (MQ=255)
                                                                         aaCATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCgg                                                                                                                                                                                                       <  2:1531415/281‑1 (MQ=255)
                                                                          aCATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGaaa                                                                                                                                                                                              >  1:699041/1‑289 (MQ=255)
                                                                               tCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTg                                                                                                                                                                                         >  1:1332883/1‑289 (MQ=255)
                                                                                cgcgGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACa                                                                                                                                                                                                                                                                 >  1:1873834/1‑216 (MQ=255)
                                                                                cgcgGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACa                                                                                                                                                                                                                                                                 <  2:1873834/216‑1 (MQ=255)
                                                                                cgcgGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTg                                                                                                                                                                                         >  1:592462/1‑288 (MQ=255)
                                                                                 gcgGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTc                                                                                                                                                                                       <  2:1408261/289‑1 (MQ=255)
                                                                                      tAACGGAGCGGTCGCTATAAAGGCTGATCGAGCTACCGCCCTGTTGTGCGAAGGCCCACAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTcgcacg                                                                                                                                                                                  <  2:341427/289‑1 (MQ=255)
                                                                                                         aaGGCTAATCGGGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAAGTGGGCGTCACAATCAGCCCCAGCGCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAAcg                                                                                                                                                               <  1:884597/289‑1 (MQ=255)
                                                                                                             ctaatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAAcgcc                                                                                                                                                             <  2:699041/279‑1 (MQ=255)
                                                                                                               aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCTTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGTGAAAGTTTGTCGCACGCAGGACTTTTTTGTTAAcgcccagg                                                                                                                                                         >  2:1630818/7‑285 (MQ=255)
                                                                                                               aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                   >  1:378002/7‑183 (MQ=255)
                                                                                                               aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                   <  2:903519/177‑1 (MQ=255)
                                                                                                               aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGACCCAGCAGCCATCCCCAGTTGGGCAGGCAACAGTTTGTCGCACGCAGAACTTGTTTGTTAACGCCGCgg                                                                                                                                                         >  2:1045947/7‑289 (MQ=255)
                                                                                                               aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCgg                                                                                                                                                         >  1:494450/7‑289 (MQ=255)
                                                                                                               aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCgg                                                                                                                                                         >  1:1900964/7‑289 (MQ=255)
                                                                                                                               tgttgtGCGAAGGCCCAGAACCACATACTGAAGAAGGTGAGCTTCACACACAGCCCCAGCTCCTTCCGCGGTTTCTGTTTTTCTGCTTTGCGATTAATTTTTGCCAGTACACCCATGCCAATAATAGTCGCGACAAGTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGAc                                                                                                                                         <  2:1356937/289‑1 (MQ=255)
                                                                                                                                       gAAGGCCCAGATCTACATACTTAAGAAGTTTAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACAACCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGcc                                                                                                                                  <  2:484621/288‑1 (MQ=255)
                                                                                                                                       gAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGcc                                                                                                                                  <  1:327429/288‑1 (MQ=255)
                                                                                                                                           gCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGgag                                                                                                                                                                                                 >  2:749599/1‑221 (MQ=255)
                                                                                                                                           gCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGgag                                                                                                                                                                                                 <  1:749599/221‑1 (MQ=255)
                                                                                                                                           gCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATa                                                                                                                             >  1:1523683/1‑289 (MQ=255)
                                                                                                                                           gCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATa                                                                                                                             >  1:673518/1‑289 (MQ=255)
                                                                                                                                           gCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGCATGAGTGAAATGACGATTGCCACATa                                                                                                                             >  2:710241/1‑289 (MQ=255)
                                                                                                                                            cccAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATa                                                                                                                             <  1:526519/288‑1 (MQ=255)
                                                                                                                                              cAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGa                                                                                                                          >  2:1901079/1‑289 (MQ=255)
                                                                                                                                                 aacaacATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTc                                                                                                                                                                                                                                                                        <  1:718900/144‑1 (MQ=255)
                                                                                                                                                  accacctACTGAAGAAGGTTAGCGTCACAATCAGCCCCAGCCCCTTCCGCTGTTTCTGGTTTTCTTCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCG‑TGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGaaa                                                                                                                        <  1:1298085/280‑1 (MQ=255)
                                                                                                                                                     acaTACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGAc                                                                                                                   <  1:1442939/289‑1 (MQ=255)
                                                                                                                                                       aTACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCa                                                                                                                 <  1:642191/289‑1 (MQ=255)
                                                                                                                                                                 agGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCcgcg                                                                                                         <  2:494450/287‑1 (MQ=255)
                                                                                                                                                                  ggTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATc                                                                                                      >  1:709946/1‑289 (MQ=255)
                                                                                                                                                                   gTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCa                                                                                                     >  1:1263033/1‑289 (MQ=255)
                                                                                                                                                                       gCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGcc                                                                                                 >  1:213939/1‑289 (MQ=255)
                                                                                                                                                                       gCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGcc                                                                                                 >  1:1808851/1‑289 (MQ=255)
                                                                                                                                                                           cacaATCATCCCCAGCTCCTTCCGCTGTTTCTGAGTTTCTGCTTTGCGATAAATGTTTGCCAGTACACCCAGTGCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGATAATCAGTGCAGGCGTGGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCTGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAAcc                                                                                             <  2:1862365/289‑1 (MQ=255)
                                                                                                                                                                                tCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACcgccgc                                                                                        <  2:1743448/289‑1 (MQ=255)
                                                                                                                                                                                    ccccAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTg                                                                                                                                    <  2:643241/241‑1 (MQ=255)
                                                                                                                                                                                    ccccAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAg                                                                                     >  2:679292/1‑288 (MQ=255)
                                                                                                                                                                                    ccccAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAg                                                                                     >  2:1069815/1‑288 (MQ=255)
                                                                                                                                                                                     cccAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGTCAGGAGAAAGTTTGTCGCCCGCAGCACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCTGCGATCATGCCAACCGGCGCCaag                                                                                    >  2:298016/1‑286 (MQ=255)
                                                                                                                                                                                            ccTTCCGTTGTTTCTGTTTTTCTGCTTTCCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGcc                                                                            <  2:575528/289‑1 (MQ=255)
                                                                                                                                                                                               tCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGCCCAATAATAGTCCCGACAATAAAGCCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGCCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTCCGGCAGGAGAAAGTTTGTCGCCGGCAGTACTTTTTTGTTAACGCGGCGGGTATGAGGGAAAGGACGATTGCCACATAAGAAAA‑GAACAAACCCGCGAGCATGCCAAACCCCCCCAGGCCCAAAccaca                                                                         >  2:744326/1‑285 (MQ=255)
                                                                                                                                                                                                  gCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGc                                                                      <  1:1045947/289‑1 (MQ=255)
                                                                                                                                                                                                    tGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGcc                                                                     <  1:1372337/288‑1 (MQ=255)
                                                                                                                                                                                                      tttCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAg                                                                  <  2:1834570/289‑1 (MQ=255)
                                                                                                                                                                                                      tttCTGGTTTTCTGCTTTGCGATAAATGTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTGTCCAGAACAGTATGGTAATCAGTGCGGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTGGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAg                                                                  <  2:1206115/289‑1 (MQ=255)
                                                                                                                                                                                                           ggTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTa                                                             <  2:531373/289‑1 (MQ=255)
                                                                                                                                                                                                              tttCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTAct                                                           <  1:94632/288‑1 (MQ=255)
                                                                                                                                                                                                                    ctatGCCATCAATTGTTGCCCGTACACCCAGGCCAATAATAGTCGCGAGCATAAAGGCGTATA‑CCGACAACTCTTGCCAGCACGGTATGGTGATCAGTGCGGGCGTTGCCACCAGCAGAACCAGCAGCAATCCCCAGTTCGGCAGAATAAAGTTTGTCGCACGCACTACTTTTGTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCTCTATCTTGCCAACCACCGCCAGGCCAATGCCCATCGCCCAGGTGTACTCTTCCTg                                                    <  2:380932/286‑1 (MQ=255)
                                                                                                                                                                                                                       tGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCCTCCTGGGc                                                 >  1:193062/1‑289 (MQ=255)
                                                                                                                                                                                                                         cGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACcagc                                                                                                                                                                                                                                 >  2:405303/1‑111 (MQ=255)
                                                                                                                                                                                                                              aaattttGCCAGTACACCCAGGCAAATAAAAGTCGCGAAAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACca                                          <  2:1625577/286‑1 (MQ=255)
                                                                                                                                                                                                                              aaTTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCATGGCAGGCGTTGCAACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACca                                          <  2:1783918/289‑1 (MQ=255)
                                                                                                                                                                                                                                       cAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAGCAGTAGGGTAATACGTGCCGGAGTTGCAACCGGCAGAACACGCAGCCCTCCCCGCTTCGGCAGGAGAAAGTTTGTCGCACGCAGGACTTTTTTGTTAACGCCGCGGGTATGCGTGCCATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATa                                 <  2:1163601/289‑1 (MQ=255)
                                                                                                                                                                                                                                       cAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGAt                                  <  1:1247355/288‑1 (MQ=255)
                                                                                                                                                                                                                                       cAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGAt                                  <  1:298016/288‑1 (MQ=255)
                                                                                                                                                                                                                                       cAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCATAACCACAGGCGATa                                 <  1:1591829/289‑1 (MQ=255)
                                                                                                                                                                                                                                       cAGTACACCCAAGCCAATAATAGTAGCGACAATTAAGGCGTATA‑CCGAACACTCTTTCCAGAACAGTATGGTAATCAGGGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGAt                                  <  2:1753026/288‑1 (MQ=255)
                                                                                                                                                                                                                                           acacCCAGGCCAATAATAGTCGGGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTGGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAgg                               <  1:1157216/287‑1 (MQ=255)
                                                                                                                                                                                                                                           acacCAACGACAATAAAAGCTGCGATAATTAAGGCGTGTACCGCCCCA‑TCTGTCCAGAACCGGATGGTAATAAGTGCAGGCGTGGCCACCAGCAGAACCAGCAGCCATCCCCAGTGCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTGTTGTTAACGCCGCGGGTATGAGTGAAATGCCGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTg                             <  2:1332883/289‑1 (MQ=255)
                                                                                                                                                                                                                                             acCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTg                             <  2:1037049/287‑1 (MQ=255)
                                                                                                                                                                                                                                               ccAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGat                         >  1:1121900/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 aGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCAACGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGataa                       >  1:1474694/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   gCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCgccgcc                                                                                       <  1:1843853/223‑1 (MQ=255)
                                                                                                                                                                                                                                                   gCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCgccgcc                                                                                       >  2:1843853/1‑223 (MQ=255)
                                                                                                                                                                                                                                                   gCCAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGataata                     >  1:535999/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    ccAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTTCGATAATAg                    >  1:2434/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    ccAATAATAGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCACCGCCCAGCTGCACTCTCCCTGGGCGTAACCACAGCCGAAAGGTGCGATAAAAg                    >  2:1517928/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       ataatgGTCGCGGCAAGTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGAcc                 <  1:900658/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       ataataGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGAcc                 <  1:425952/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        taataGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGAcc                 >  1:1059569/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         aataGTCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGAcccc               <  1:1728247/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           taggcgcaccAATTAAGTCGTCGA‑CCGACCACTCTTGCCCGAACCGGATGGTAAGCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGACCCCAc             <  2:20311/280‑1 (MQ=255)
                                                                                                                                                                                                                                                              tCGCGACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCa                                                                                                                 >  2:444385/1‑186 (MQ=255)
                                                                                                                                                                                                                                                                 cgACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTa                                                             <  2:117212/235‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gACAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAAGCAGGGCAGGCGTTGCCAACAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGACCCCACGTTAcc       <  1:146915/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cAATTAAGGCGTATA‑CCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGACCCCACGTTACccg     <  1:1630818/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                
CAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATGCTCTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATGCTGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATA‑CGCTCCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGACCCCACGTTACCCGCCG  >  CP042583/604407‑604957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A