Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 604,683 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583604,6830GC99.3% 674.9 / NA 292intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (139/150);  total (141/151)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583604,6840CG99.0% 671.6 / NA 291intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  major base G (137/149);  minor base T (1/2);  total (140/151)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,6850TA99.3% 685.3 / NA 291intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (139/149);  minor base C (0/2);  total (140/151)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 292 total aligned reads displayed.

CACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATGCTCTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATGCTGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACGCTCCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGACCCCACGTTACCCGCC  >  CP042583/604402‑604956
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                               
  cGCCAGGAACCCACCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCActct                                                                                                                                                                                                                                                                          <  1:2369487/289‑1 (MQ=255)
          acacacCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                  <  2:1721730/289‑1 (MQ=255)
            caacCGGACAGAATGACTGCGAAGGCATTAATCGACACGAAGAGCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATAAAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACa                                                                                                                                                                                                                                                                <  2:1955256/287‑1 (MQ=255)
            acacCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACa                                                                                                                                                                                                                                                                <  1:923977/289‑1 (MQ=255)
            acacCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACa                                                                                                                                                                                                                                                                <  1:1458330/289‑1 (MQ=255)
             cacCGCACAGCATAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATAACGACCACTCTTTCCAGAACAg                                                                                                                                                                                                                                                               >  1:2424714/1‑289 (MQ=255)
                        aTAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTc                                                                                                                                                                                                                                                                       <  1:2696069/270‑1 (MQ=255)
                        aTAACTGCGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                      <  2:2547551/287‑1 (MQ=255)
                               cGAAGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAg                                                                                                                                                                                                                                              >  2:1309444/1‑288 (MQ=255)
                                 aaGGCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCg                                                                                                                                                                                                                                           >  2:1062964/1‑289 (MQ=255)
                                    gCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTTAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                      <  2:1927123/275‑1 (MQ=255)
                                    gCATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                      >  1:1927123/1‑275 (MQ=255)
                                     cATTAATCGACTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGtt                                                                                                                                                                                                                                         <  1:788679/287‑1 (MQ=255)
                                             gactGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACcagca                                                                                                                                                                                                                               <  1:1827848/287‑1 (MQ=255)
                                              actGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                  <  1:2239810/252‑1 (MQ=255)
                                              actGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                      <  2:740168/264‑1 (MQ=255)
                                               ctGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGt                                                                                                                                                                                                                                                              <  2:1781660/256‑1 (MQ=255)
                                                        cgcgGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                  <  1:1176321/243‑1 (MQ=255)
                                                        cgcgGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                  >  2:1176321/1‑243 (MQ=255)
                                                            gTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                  <  2:586606/239‑1 (MQ=255)
                                                            gTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCAt                                                                                                                                                                                                                 >  1:2269384/1‑288 (MQ=255)
                                                                       ataACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGc                                                                                                                                                                                                     >  2:86973/1‑289 (MQ=255)
                                                                           ccAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTAAGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGga                                                                                                                                                                                                 >  1:737573/1‑289 (MQ=255)
                                                                              aaCATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTa                                                                                                                                                                                                                                                             >  2:854834/1‑226 (MQ=255)
                                                                                cATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTa                                                                                                                                                                                                                                                        <  2:788544/229‑1 (MQ=255)
                                                                                cATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                      >  1:2542191/1‑231 (MQ=255)
                                                                                cATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                      <  1:259637/231‑1 (MQ=255)
                                                                                cATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAAcc                                                                                                                                                                                                                          >  2:2403424/1‑259 (MQ=255)
                                                                                cATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCGGGTGaaac                                                                                                                                                                                            >  2:757209/1‑288 (MQ=255)
                                                                                cATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAg                                                                                                                                                                                            >  2:37354/1‑289 (MQ=255)
                                                                                cATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATAACGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGAGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAg                                                                                                                                                                                            >  1:884440/1‑289 (MQ=255)
                                                                                     cgcgGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACa                                                                                                                                                                                                                                                                <  2:1089501/216‑1 (MQ=255)
                                                                                     cgcgGTTAACGAAGCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAAt                                                                                                                                                                                                                                                      >  2:2687164/1‑226 (MQ=255)
                                                                                                  gCGGTCGATATAAAGGCTAATCGAGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACt                                                                                                                                                                          >  1:1131734/1‑289 (MQ=255)
                                                                                                                    aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTg                                                                                                                                                                                                                                                 <  2:262196/194‑1 (MQ=255)
                                                                                                                    aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTg                                                                                                                                                                                                                                                 >  1:262196/7‑200 (MQ=255)
                                                                                                                    aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCg                                                                                                                                                                                                                                           >  1:277486/7‑206 (MQ=255)
                                                                                                                    aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCgg                                                                                                                                                        >  2:205925/7‑289 (MQ=255)
                                                                                                                    aatcgagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCgg                                                                                                                                                        >  2:1575837/7‑289 (MQ=255)
                                                                                                                     atcgggctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCggg                                                                                                                                                       >  1:409368/6‑289 (MQ=255)
                                                                                                                        gagctACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTAt                                                                                                                                                    <  1:205925/287‑1 (MQ=255)
                                                                                                                            tACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAg                                                                                                                                                 <  1:1719498/288‑1 (MQ=255)
                                                                                                                                    tgttgtGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGAc                                                                                                                                        <  1:1575837/289‑1 (MQ=255)
                                                                                                                                        gtgCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                  >  1:2530493/1‑163 (MQ=255)
                                                                                                                                           cGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGcc                                                                                                                                 >  1:1464887/1‑289 (MQ=255)
                                                                                                                                           cGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGcc                                                                                                                                 >  2:166454/1‑289 (MQ=255)
                                                                                                                                              aGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCcaca                                                                                                                              >  2:121856/1‑289 (MQ=255)
                                                                                                                                              aGGCCCAGAACAACATACTGAAGAAGGTGAGCGACACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCcaca                                                                                                                              >  2:1681049/1‑289 (MQ=255)
                                                                                                                                                gCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCg                                                                                                                                                                                                                                           >  1:35853/1‑178 (MQ=255)
                                                                                                                                                 cccTGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATa                                                                                                                            <  1:433571/288‑1 (MQ=255)
                                                                                                                                                 cccAGAACAACATACTGAAGAAGGGGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATGAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACAt                                                                                                                             <  1:203565/287‑1 (MQ=255)
                                                                                                                                                              aCTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGa                                                                                                              >  2:405688/1‑289 (MQ=255)
                                                                                                                                                               cTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGAc                                                                                                             <  1:1161534/289‑1 (MQ=255)
                                                                                                                                                                tGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGaa                                                                                                                                                                                                                                                                  >  2:277171/1‑139 (MQ=255)
                                                                                                                                                                tGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTcgcacg                                                                                                                                                                                 >  1:2418871/1‑220 (MQ=255)
                                                                                                                                                                tGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGACTGCCACACAAGAAAATGACCaacc                                                                                                             >  2:1465793/1‑285 (MQ=255)
                                                                                                                                                                tGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTCTCTGCTTTGCGATAAATTTGTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAAAAGTATGGTAATCAGAGCAGGCGTTGCCACCAGCAGAACCAGCCTGCACACACAGTTCGGCAGGAGAGAGTTCGTCGCACGCAGTACTTTCTTGTTAACGCCGCTGATATGATTGAATGAACGACTGCCCCATCAGAAACTGACCAGAc                                                                                                             >  2:2539225/1‑288 (MQ=255)
                                                                                                                                                                     aagGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAAcgccg                                                                                                                                                           <  2:1268312/237‑1 (MQ=255)
                                                                                                                                                                     aagGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAAcgccg                                                                                                                                                           >  1:1268312/1‑237 (MQ=255)
                                                                                                                                                                     aagGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGa                                                                                                       >  2:2285682/1‑289 (MQ=255)
                                                                                                                                                                      agGTGAGCGTCACAATCAGCCCCAGATCCTTACGCTGTTTCTGCGTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGAAAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGAt                                                                                                      <  2:1152210/289‑1 (MQ=255)
                                                                                                                                                                        gTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGA‑CAGACCCGCGATCAt                                                                                                   >  2:2120231/1‑289 (MQ=255)
                                                                                                                                                                         tGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGAGGATTGCCACAAACGAAAATGACCAGACCCGCGATCag                                                                                                   >  2:676690/1‑288 (MQ=255)
                                                                                                                                                                          gAGCGTCACACTCAGCCCCAGCTCCTCCCGCTGCTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCACTAATAGTCGCGACAATTAAGGCGTCTACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTTCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTAGGCAGGCGAAGGTTTTTCGCACGCAGTACTCTTTTGTTAACGCCTCGGGTATGCGTGAAATGATGATTGCCGCATAAGAACCTGACCAGCCACGCTATCAt                                                                                                   >  2:1845989/1‑288 (MQ=255)
                                                                                                                                                                          gAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCAt                                                                                                   >  2:1355600/1‑288 (MQ=255)
                                                                                                                                                                              gTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCa                                                                                               <  1:1633190/288‑1 (MQ=255)
                                                                                                                                                                                             aGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGaaa                                                                                                                       >  1:1408208/1‑249 (MQ=255)
                                                                                                                                                                                             aGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGaaa                                                                                                                       <  2:1408208/249‑1 (MQ=255)
                                                                                                                                                                                              gCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATccc                                                                                                                                                                                                              <  2:22703/161‑1 (MQ=255)
                                                                                                                                                                                                    tCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCa                                                                         >  2:1209555/1‑288 (MQ=255)
                                                                                                                                                                                                    tCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGCACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACGCGCGATGAGGCGCACCGCAGCCAGGCACACGCCCa                                                                         >  2:428257/1‑288 (MQ=255)
                                                                                                                                                                                                        cTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGc                                                                     >  1:607558/1‑288 (MQ=255)
                                                                                                                                                                                                         tttttCTTGTTTTCTTCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTGGCGGCAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGcc                                                                    <  2:33894/286‑1 (MQ=255)
                                                                                                                                                                                                         tGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGcc                                                                    <  1:1404737/288‑1 (MQ=255)
                                                                                                                                                                                                            ttttGGTTTTCTGCTTTGCGGTAAAGTTTTGCCAGTACACCCAGGCCAATAATAGTCGCTACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTACCGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGc                                                                <  2:933349/286‑1 (MQ=255)
                                                                                                                                                                                                            ttatGGTTTTCCGCTTTGCGATAAATTTTTGCCAGTACCCCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGc                                                                <  2:1395835/286‑1 (MQ=255)
                                                                                                                                                                                                                ggTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTa                                                            <  1:1536065/289‑1 (MQ=255)
                                                                                                                                                                                                                ggTTTTCTGCTGTGCGATAAAGTTTTGCCAGTACCACCAGGGCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCTGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTa                                                            <  2:1628963/289‑1 (MQ=255)
                                                                                                                                                                                                                     tCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTc                                                                                                                                                                                      <  1:2293841/162‑1 (MQ=255)
                                                                                                                                                                                                                       tGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACa                                                                                                                                                                                                                                                                <  1:1000416/86‑1 (MQ=255)
                                                                                                                                                                                                                       tGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACa                                                                                                                                                                                                                                                                >  2:1000416/1‑86 (MQ=255)
                                                                                                                                                                                                                                 tAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTaa                                            <  1:37354/288‑1 (MQ=255)
                                                                                                                                                                                                                                   aaTTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACca                                         <  1:505328/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGcc                                                                                                                                 >  1:1061951/1‑191 (MQ=255)
                                                                                                                                                                                                                                              tgacacCCAGGCCCATAATAGTCGCGACAATTAAGGCGTATACCGCCCACGCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAgg                              <  2:2523524/287‑1 (MQ=255)
                                                                                                                                                                                                                                               tACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCgccgcc                                                                                      >  1:2454178/1‑232 (MQ=255)
                                                                                                                                                                                                                                               tACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCgccgcc                                                                                      <  2:2454178/232‑1 (MQ=255)
                                                                                                                                                                                                                                                acacCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTg                            <  1:785446/289‑1 (MQ=255)
                                                                                                                                                                                                                                                acacCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTg                            <  2:225014/289‑1 (MQ=255)
                                                                                                                                                                                                                                                acacCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTg                            <  1:121856/289‑1 (MQ=255)
                                                                                                                                                                                                                                                acacCCAGGCCAATAATAGTCGCGACAATTAAGGAGTATACCGACCACACTTTCCAGAACAGTATGGAAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGCAACCACAGGCGATAGGTg                            <  1:2662220/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  acCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCg                          <  2:1131734/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         ccAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACa                                                                                                                                                                                                                                                                <  2:2704017/52‑1 (MQ=255)
                                                                                                                                                                                                                                                         ccAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAg                   >  1:1082693/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          cAATAATAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGa                  <  1:1789230/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aataatAGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGAc                 <  1:166454/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            ataataGTCGCGAAAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGAcc                <  1:1326707/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             taataGTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTa                                                            <  2:298398/244‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gTCGCGACAATTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCTCCAGACCAAAGCCCATCGCCCAGCTGTCCTCTTCCTGGGCTTAACCACAGGCGATAGGTGCGATAACAGAaccaaggt          >  2:1805207/1‑284 (MQ=255)
                                                                                                                                                                                                                                                                          aaTTAAGGCGTATACCGACCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGACCCCACGTTACccgcc  <  2:2421502/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                               
CACGCCAGGAACACACCGCACAGCATAACTGCGAAGGCATTAATGCTCTGGAACATCGCGGTCGGAACGGTATAACCAAACATATCGCGGTTAACGAAGCGGTCGATATAAAGGCTAATGCTGCTACCGCCCTGTTGTGCGAAGGCCCAGAACAACATACTGAAGAAGGTGAGCGTCACAATCAGCCCCAGCTCCTTCCGCTGTTTCTGGTTTTCTGCTTTGCGATAAATTTTTGCCAGTACACCCAGGCCAATAATAGTCGCGACAATTAAGGCGTATACGCTCCACTCTTTCCAGAACAGTATGGTAATCAGTGCAGGCGTTGCCACCAGCAGAACCAGCAGCCATCCCCAGTTCGGCAGGAGAAAGTTTGTCGCACGCAGTACTTTTTTGTTAACGCCGCGGGTATGAGTGAAATGACGATTGCCACATAAGAAAATGACCAGACCCGCGATCATGCCAACCGCCGCCAGGCCAAAGCCCATCGCCCAGCTGTACTCTTCCTGGGCGTAACCACAGGCGATAGGTGCGATAATAGACCCCACGTTACCCGCC  >  CP042583/604402‑604956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A