Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,795,440 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,795,4400GC99.6% 612.8 / NA 257intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (118/138);  total (118/139)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,795,4410CG99.2% 600.1 / NA 257intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (115/139);  total (118/139)
Fisher's exact test for biased strand distribution p-value = 2.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,795,4420TA99.6% 611.2 / NA 257intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (117/139);  minor base C (1/0);  total (118/139)
Fisher's exact test for biased strand distribution p-value = 4.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 257 total aligned reads displayed.

TTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGGCTACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCGCTTTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACACC  >  CP042583/1795160‑1795716
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                  
 tGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCACTAATCTCTTGCGGCGAACGCGGa                                                                                                                                                                                                                                                                             >  1:898744/1‑289 (MQ=255)
  gCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGAt                                                                                                                                                                                                                                                                            <  1:1370426/289‑1 (MQ=255)
  gCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAAAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGCCGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGAt                                                                                                                                                                                                                                                                            <  1:1899031/289‑1 (MQ=255)
              tCAGTCGCCGCAAACCAGGTTTCCAGAATCGCATTAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCTGTTTACCGGTGGCTTTCAGCGCCGCAATCACGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCg                                                                                                                                                                                                                                                                <  1:1681394/289‑1 (MQ=255)
              tCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCg                                                                                                                                                                                                                                                                <  2:1472635/289‑1 (MQ=255)
              tCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCg                                                                                                                                                                                                                                                                <  2:1064323/289‑1 (MQ=255)
              tCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCg                                                                                                                                                                                                                                                                <  1:652837/289‑1 (MQ=255)
              tCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCg                                                                                                                                                                                                                                                                <  1:1871485/289‑1 (MQ=255)
              tCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCg                                                                                                                                                                                                                                                                <  1:148238/289‑1 (MQ=255)
              tCAGTCCCCCCACAACAGGTTTCCAGCAGCCCATCAGCCTGCTGATCTGCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCg                                                                                                                                                                                                                                                                <  2:1450552/289‑1 (MQ=255)
                aGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGct                                                                                                                                                                                                                                                              >  2:1130631/1‑289 (MQ=255)
                 agccccGAAAACCCGGTGTCAGGAATCGAGGCAGCCTGCGTGTCTTCTGGAACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTGCCGGTGGCTTTCAGCGCCGCAATGAAGTCACGGTGGCTTTGCGGAATAGTGAGATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCGCTTGCGGCGAACGCGGATCGACTTTGACCGct                                                                                                                                                                                                                                                              <  2:1615942/286‑1 (MQ=255)
                     ccGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGCTCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCCCAATCAAATCACGTTGGCTTTGCGGAATCGTGATATCGGTCCGGCTGGCGGCTTCGTGCGCCATCCCCTGTGCTTCACCGTCTCCAGCCACCACCCCATCACATTGTTTCCCCGTCTTCACCGCTTCATCAATCAGCTCCTTCGGCGAACGCGGATCGACTTCTACCGCttcttc                                                                                                                                                                                                                                                         >  2:1384426/1‑289 (MQ=255)
                        cAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATa                                                                                                                                                                                                                                                      <  2:904336/289‑1 (MQ=255)
                              cgggttCCGGAATCGCACCACCCTGCTGATCTTCTGTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGAtt                                                                                                                                                                                                                                                <  2:1648993/285‑1 (MQ=255)
                                 tttCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTc                                                                                                                                                                                                                                               <  1:1559767/287‑1 (MQ=255)
                                   tCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGa                                                                                                                                                                                                                                           >  1:1418617/1‑289 (MQ=255)
                                   tCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGa                                                                                                                                                                                                                                           >  2:1030378/1‑289 (MQ=255)
                                           cGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATa                                                                                                                                                                                                                                   <  1:209082/289‑1 (MQ=255)
                                             cATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGGTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCCCCGCTTCATCCATCATCCCTATCGGCGAACGCGCATCGACTTTGACCGCATCTTCATACCGATTCCTGAACTCGATact                                                                                                                                                                                                                                 >  2:1675680/1‑287 (MQ=255)
                                                        tgATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTc                                                                                                                                                                                                                        >  2:735365/1‑287 (MQ=255)
                                                           tcttctTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTgg                                                                                                                                                                                                                   <  2:1207957/289‑1 (MQ=255)
                                                            cttcttTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGt                                                                                                                                                                                                                  >  2:764049/1‑289 (MQ=255)
                                                                 ttCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTc                                                                                                                                                                                                                        <  1:173048/278‑1 (MQ=255)
                                                                 ttCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGt                                                                                                                                                                                                             >  1:144872/1‑289 (MQ=255)
                                                                 ttCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATAGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTCCAGCCACCACCACACCAGATTGTTTCGCCGGCTGCACCGCTTCATCAATCATCTCTTCCGGCTAACCCGGATCGCCTTCGACCGCTGCGTCATACTGATTCAGGCAATCGATAATGCCTTTGTCACTGGTAACGt                                                                                                                                                                                                             >  2:1487953/1‑289 (MQ=255)
                                                                  tcccccgcgccggcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGtt                                                                                                                                                                                                            <  2:1719350/283‑1 (MQ=255)
                                                                     ccagcgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGc                                                                                                                                                                                                         <  1:1652027/289‑1 (MQ=255)
                                                                       agcgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGcc                                                                                                                                                                                                        >  2:1833285/1‑288 (MQ=255)
                                                                         cgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGCTCGACTTTGACCGCTTATTCATACTGATTCAGGAAATCGATAACGCCTTTTTCACTGGTAACGTTCCCCCCt                                                                                                                                                                                                     >  2:788848/1‑289 (MQ=255)
                                                                         cgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCt                                                                                                                                                                                                     >  1:1947468/1‑289 (MQ=255)
                                                                         cgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGCCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACCTTGACCGCTTCTTCATACTGATTTAGGAAATCGATAATGCCTTTGTCCCTGGTCACTTTCGCACCt                                                                                                                                                                                                     >  2:154301/1‑289 (MQ=255)
                                                                              gcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGc                                                                                                                                                                                                >  2:320015/1‑289 (MQ=255)
                                                                               cgGTCGCCCGGTCATCCGCACCCGAACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTTGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGc                                                                                                                                                                                                <  2:898744/288‑1 (MQ=255)
                                                                                  aCGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATa                                                                                                                                                                                             <  1:1317580/288‑1 (MQ=255)
                                                                                   cGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTTTCACTGGTAACGTTCGCCCCTTTGGCATAc                                                                                                                                                                                            >  2:1763106/1‑288 (MQ=255)
                                                                                   cGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATAc                                                                                                                                                                                            <  1:1763106/288‑1 (MQ=255)
                                                                                                gcaccagcaccaGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGtt                                                                                                                                                                              >  1:538070/1‑289 (MQ=255)
                                                                                                        accgggggTTTACCGGGGGCTTTCAGGGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGa                                                                                                                                                                      <  2:849908/283‑1 (MQ=255)
                                                                                                            gcGGTTTACCGGTGGCTTTCAGCGCCGCAATCCAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGc                                                                                                                                                                  >  1:946386/1‑289 (MQ=255)
                                                                                                              ggTTTACCGGTGGCTTTAAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGc                                                                                                                                                                  <  1:1139280/287‑1 (MQ=255)
                                                                                                                    ccGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGccc                                                                                                                                                                                                       >  1:1944442/1‑244 (MQ=255)
                                                                                                                    ccGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGccc                                                                                                                                                                                                       <  2:1944442/244‑1 (MQ=255)
                                                                                                                      tgTGGCTTTCAGCGACGCAATCAAGTCACGTTGGGTTTTGGTACTAGTGATATCGGGCCGGCTGGGTGCTTCGTACGCCATCCCCTGTGCGTCACGTACTACATCCACCAGCGCATGAGATTGTTTCGCTGTCTGCACCGCTTCATCAATCGTCTCTTGCGGGGAACGGGGATCGACTTTGACGGCTGCTTCGTGCTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTCTTCACCGACGGCATTGCTAATc                                                                                                                                                        <  2:1300404/288‑1 (MQ=255)
                                                                                                                          gCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATACTGCCTTTGTCACTTGTAACGTTCGCCCCTTTGGCTTACAGCACTTTTACGTTTTCACTGACGGCATTTTTAATCCTgg                                                                                                                                                    >  2:684853/1‑289 (MQ=255)
                                                                                                                            tttCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGt                                                                                                                                                   <  1:318964/288‑1 (MQ=255)
                                                                                                                            tttCAGAGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGt                                                                                                                                                   <  1:996700/288‑1 (MQ=255)
                                                                                                                                cgccccgcAATCAAGTCACTTTGGCTTTGCTGAATAGTGATATCGGTCCGGCTGCAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTa                                                                                                                                              <  1:465979/285‑1 (MQ=255)
                                                                                                                                  cgccgcAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCtt                                                                                                                                                                                                    >  1:1241850/1‑233 (MQ=255)
                                                                                                                                   gccgcAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTa                                                                                                                                              <  1:47513/286‑1 (MQ=255)
                                                                                                                                   gccgcAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTa                                                                                                                                              <  1:169167/286‑1 (MQ=255)
                                                                                                                                   gccgcAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTa                                                                                                                                              <  1:413361/286‑1 (MQ=255)
                                                                                                                                   gccgcAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTa                                                                                                                                              <  2:268891/286‑1 (MQ=255)
                                                                                                                                    ccgcAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACgg                                                                                                                                           >  1:1120728/1‑288 (MQ=255)
                                                                                                                                     cgcAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGt                                                                                                                                          >  1:451031/1‑288 (MQ=255)
                                                                                                                                                  cGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATTCTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCg                                                                                                                             >  2:610059/1‑288 (MQ=255)
                                                                                                                                                   gTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGtt                                                                                                                                                                                                            <  2:658949/208‑1 (MQ=255)
                                                                                                                                                   gTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGc                                                                                                                           <  1:8072/289‑1 (MQ=255)
                                                                                                                                                        cTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTCACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGGCAGGACGGTCACTGATTGATCGGCAaca                                                                                                                       >  2:1238915/1‑288 (MQ=255)
                                                                                                                                                         tttGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTTCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAacac                                                                                                                      <  1:693298/288‑1 (MQ=255)
                                                                                                                                                          ttGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGc                                                                                                                                                                  <  1:753867/243‑1 (MQ=255)
                                                                                                                                                                      gATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGAcc                                                                                                          <  1:1179303/287‑1 (MQ=255)
                                                                                                                                                                       atatCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCa                                                                                                         >  2:1582861/1‑287 (MQ=255)
                                                                                                                                                                            ggTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAg                                                                                                        >  2:434583/1‑283 (MQ=255)
                                                                                                                                                                            ggTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGccc                                                                                                  >  1:841030/1‑289 (MQ=255)
                                                                                                                                                                              tCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCa                                                                                                 >  1:288176/1‑288 (MQ=255)
                                                                                                                                                                               ccGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATc                                                                                                                                                        >  2:1078199/1‑232 (MQ=255)
                                                                                                                                                                               ccGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATc                                                                                                                                                        <  1:1078199/232‑1 (MQ=255)
                                                                                                                                                                               ccGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAt                                                                                                >  2:29844/1‑288 (MQ=255)
                                                                                                                                                                                  gCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGCTTCAGGCAATCGATAAGGCCTTTGTCACTGGTAACGTTCTCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGCCATTTTTAATCCAGGTGAGTCCGGTCACGGCTTGTACGGCAACACGGCGTGCGGAACCgccgccaacac                                                                                              >  2:218670/1‑282 (MQ=255)
                                                                                                                                                                                    tGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCAtcacgt                                                                                           <  1:1529193/288‑1 (MQ=255)
                                                                                                                                                                                             cGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGttt                                                                                    >  1:607337/1‑286 (MQ=255)
                                                                                                                                                                                                gcgcCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTc                                                                              <  1:1833285/289‑1 (MQ=255)
                                                                                                                                                                                                      tCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAg                                                                        >  1:638686/1‑289 (MQ=255)
                                                                                                                                                                                                          cTGTGCTTCACCGACTACAGCCACAACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTCACTGTCCGCCAGTGGc                                                                    <  1:643168/289‑1 (MQ=255)
                                                                                                                                                                                                            gtgCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCTGCTGCGGACCAGCTTCCCATCCCGTCACGTTCACTGTCCCCCAGTCGcc                                                                   >  2:1525675/1‑288 (MQ=255)
                                                                                                                                                                                                                ttCCCCCACTACAGCCACCACCACATCAGGTTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAac                                                               <  2:603048/288‑1 (MQ=255)
                                                                                                                                                                                                                  cACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGCTTTATCGGCAACACCGGCTTCGGACCAGCTGACCATCACGTCCCGTTTACTGTCCGCCAGTGGCCCAaccc                                                             >  2:951021/1‑287 (MQ=255)
                                                                                                                                                                                                                       aCTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAacac                                                                                                                      >  2:578335/1‑226 (MQ=255)
                                                                                                                                                                                                                       aCTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCaa                                                       >  1:406338/1‑289 (MQ=255)
                                                                                                                                                                                                                            aGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTc                                                                              >  2:618635/1‑261 (MQ=255)
                                                                                                                                                                                                                              ccaccaccaCATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCg                                                                                                                                                                                                                                                                >  2:358719/1‑81 (MQ=255)
                                                                                                                                                                                                                                 ccaccacATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCg                                                                                                                                                                                                                                                                >  2:1698567/1‑78 (MQ=255)
                                                                                                                                                                                                                                  caccacATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGtt                                                                                                                                                                                                            <  1:1706693/129‑1 (MQ=255)
                                                                                                                                                                                                                                  caccacATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGAcc                                                                                                          <  2:1454471/227‑1 (MQ=255)
                                                                                                                                                                                                                                  caccacATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTa                                                                                   <  1:961586/250‑1 (MQ=255)
                                                                                                                                                                                                                                  caccacATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGgccgat                                            >  1:717426/1‑285 (MQ=255)
                                                                                                                                                                                                                                   accacATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCCCTTTACCGTTTTCACCGACGGAATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTTCCCATCACGTCACGTTCACTGTCCGCCAGTGGCCCACCCCCCGCaaggcggcccgctt                                           >  2:1844600/1‑277 (MQ=255)
                                                                                                                                                                                                                                      acaTCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGc                                                                                                                                                                  >  1:92499/1‑167 (MQ=255)
                                                                                                                                                                                                                                      acaTCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGgccgattttt                                        >  1:161565/1‑281 (MQ=255)
                                                                                                                                                                                                                                       caTCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGatttttt                                       <  1:662543/289‑1 (MQ=255)
                                                                                                                                                                                                                                          cAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGATTTTTTCAg                                    <  1:788848/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  ttCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTAc                                                                                  <  1:1470408/235‑1 (MQ=255)
                                                                                                                                                                                                                                                  ttCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGAAACGGCGGCCGATTTTTTCAGCGGTAACg                            >  2:842161/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  ttCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACCGCACGTTTACTGTCCGCCAGCGGCCCATCCCCCGCCACGGTGGCCGTATTTTTCCGCGCTCACg                            >  2:631800/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           tGCACCGCTTCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGATTTTTTCAGCGGTAACGTTTCGAGAc                   <  1:1003959/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   ttCATCAATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGATTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTc           >  1:523617/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     catcaATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCa                                                                         >  2:448449/1‑225 (MQ=255)
                                                                                                                                                                                                                                                                     catcaATCATCTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGATTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCa          >  1:1030709/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            catcTCTTGCGGCGAACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCCGATTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACAcc  <  1:614695/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                  
TTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTCTGCACCGCTTCATCAATCATCTCTTGCGGGCTACGCGGATCGACTTTGACCGCTTCTTCATACTGATTCAGGAAATCGATAATGCCTTTGTCACTGGTAACGTTCGCCCCTTTGGCATACAGCACTTTACCGTTTTCACCGACGGCATTTTTAATCCCGGTCAGTACGGTCACGGATTGATCGGCAACACCGGCTGCGGACCAGCTGCCCATCACGTCACGTTTACTGTCCGCCAGTGGCCCAACCACCGCAATGGTGGCGCTTTTTTTCAGCGGTAACGTTTCGAGACGGTTTTTCAGCAACACC  >  CP042583/1795160‑1795716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A