Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,797,255 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,797,255 | 0 | A | T | 99.1%
| 539.4
/ NA
| 233 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (103/127); minor base G (0/2); total (103/130) |
| Fisher's exact test for biased strand distribution p-value = 5.04e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,797,256 | 0 | G | C | 98.7%
| 537.3
/ NA
| 233 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (103/127); minor base A (0/3); total (103/130) |
| Fisher's exact test for biased strand distribution p-value = 2.57e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,797,257 | 0 | T | A | 99.1%
| 547.2
/ NA
| 233 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (103/128); minor base C (0/2); total (103/130) |
| Fisher's exact test for biased strand distribution p-value = 5.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 233 total aligned reads displayed.
AGAGAGAAAAAGAATGCTCAGTTTATTGTCTGAATTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTAGTCACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCAGTCTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAAGCACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATAGCCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACAGTGTGATTGGAAGTAGCTGTAT > CP042583/1796978‑1797535
|||
agagagaAAAAGAATGCTCAGTTTATTGTCTGACTTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGaa > 1:1792859/1‑289 (MQ=255)
agaAAAAGAATGCTCAGTTTATTGTCTGAATTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATtgt > 1:1205145/1‑289 (MQ=255)
aaaaaGAATGCTCAGTTTATTGTCTGAATTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTgg > 1:8529/1‑289 (MQ=255)
tGCTCAGTTTATTGTCTGAATTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGt > 1:610744/1‑286 (MQ=255)
cTCAGTTTATTGTCTGAATTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCggggggcgg > 2:1432572/1‑283 (MQ=255)
ttATTGTCTGAATTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGCTggttgaagtc > 2:1395254/1‑279 (MQ=255)
cTGAATTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCCGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGGTCG‑T‑AAAGCCGGCGtgt > 2:613163/1‑286 (MQ=255)
gAATTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTCCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCG‑G‑AATGCCCGCGTCAcc > 2:1483841/1‑288 (MQ=255)
ttgccgtgCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTTATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAAGAAAGCCTTGTTGAATGAACTTGCTCGTCTGGTGGATTCTTCACACCTGCTCGCCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGACAGGGCGACGCTCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAattatt < 2:1616273/282‑1 (MQ=255)
cTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGGC‑G‑AAAGCCTGCGGTGCCGCCGCAGAAATTATTCTGGTgag > 2:490685/1‑287 (MQ=255)
cTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCCCCGCCAAAAATATTCTGATTCa > 2:644666/1‑289 (MQ=255)
tGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAg < 2:1555024/289‑1 (MQ=255)
tGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAg < 1:1348870/289‑1 (MQ=255)
aTTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGgc < 1:242300/288‑1 (MQ=255)
tggtataCAAGGAGCTATTCGAGTTTGGGATGTTTTTGCGCCACCTACAGGAGTGCAAAATGTCTTCCAAGAGAACAACTGATGATAAAGCCTTGTTGAATGAACTTGCTCGTCTGGTGGGTGCTTCGCACCTGCGCACCGATCCCGCAAAATCGGCCCGCTATCGCAAGTGCTTCCGTTCTGGTCAGGGCGACGCGCCGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCG‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATACAGgccgc < 2:1149508/286‑1 (MQ=255)
tGTTATACAAGTGGCTATTCTACTTTGTGATATTTTTTCGACACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTAACCGATCCCGCAAACACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGgccgc < 2:1177167/289‑1 (MQ=255)
tGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGgccgc < 1:1620948/289‑1 (MQ=255)
ggttagaacaGGCGCTATTCTGGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGgccgc < 2:1246484/280‑1 (MQ=255)
taCAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCGTGCGTCCCCGCCCACAAAATTATTCTGATGTGAGCCGCCAAt > 2:1944453/1‑288 (MQ=255)
taCAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAg > 1:867793/1‑279 (MQ=255)
taCAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAg < 2:867793/279‑1 (MQ=255)
taCAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATa < 1:1432572/289‑1 (MQ=255)
ggCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGGT‑T‑AAAGCCTGTGGCCCCTCCGACCAAAATATTCCGATGCAGGCCCCCACTAAAgg > 2:1159117/1‑288 (MQ=255)
ggCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAgg > 1:1126388/1‑288 (MQ=255)
ggCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAgg > 1:454909/1‑288 (MQ=255)
gcgcTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGc < 2:1126388/288‑1 (MQ=255)
cgcTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGaa < 1:1000873/218‑1 (MQ=255)
cgcTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTTGCGGTTGGT‑GAAAAGCTTCCGTACCCGCGGCCAAAA‑TATTTCGGTTCCGGCCGCCCAAACAGGcc > 2:942892/1‑288 (MQ=255)
cgcTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAATCCTGCGTCACCCCCCACAAAATTATTCTGTAGCAGGCCGCCCATACAgg > 1:488592/1‑286 (MQ=255)
cgcTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAg < 1:278625/272‑1 (MQ=255)
cgcTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGc < 1:740225/287‑1 (MQ=255)
cgcTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGGCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGG‑AAAGCTGCCGTCGCCCCCGCCAAAA‑TATTCGTATGGAGGCCGCCAATACAGGcc > 2:679791/1‑288 (MQ=255)
cgcTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGAAAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGc < 2:1723591/287‑1 (MQ=255)
ttCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATTCAGGCCCCCAATACAGGCCTGAGCg > 1:931094/1‑289 (MQ=255)
ttCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCg < 1:1256128/289‑1 (MQ=255)
tttGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCgaaggat < 1:1757666/289‑2 (MQ=255)
tttgggaatTTTTGCGCCACCACAAGGAGTGGAAGAGGTCTTCAATGACAACAACTGATAATAAAGCCGTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCgaaggat < 2:1056518/281‑2 (MQ=255)
tgtgATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGa > 1:210173/1‑240 (MQ=255)
tgtgATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGgccgc > 1:800984/1‑264 (MQ=255)
tgATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGc < 2:1792274/272‑1 (MQ=255)
atTTTTTCGCCCCCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGTTTCTTCACACCTGCGCACCGATCCCGCAAAAACGGCCCGCTATCGCATGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTGCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCa < 1:906983/289‑1 (MQ=255)
tCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAATCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGt < 1:1671341/289‑1 (MQ=255)
tcgccaccaAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTTCGTCCCACCCGACAAAATTATTCCGCTGCAGGCCGCCAATACAAGCCTGACCGAAGGATCGACGCCAAAAGGGaa > 1:1506989/8‑289 (MQ=255)
ggAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGa < 2:1348737/289‑1 (MQ=255)
ggAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAAATATTCTGATGCAGGCCCCCAAACCAGGCCTGACCGAAGGATCGACGCCCAAAGGTAAAGATTATGAA‑CGCGa > 1:6666/1‑289 (MQ=255)
aaaaTGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCggg > 2:1841409/1‑184 (MQ=255)
aaaaTGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCggg < 1:1841409/184‑1 (MQ=255)
aaTGTTTTACATGACAACAACTGATGATAAAGCCTTTGTGAATGACCGTGCTATTCGTGTGGGTTCTTCACACCTGCTAACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTc < 2:1801819/289‑1 (MQ=255)
gTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCCCCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAACCGGTAACGATTATGAT‑CGCGATGTCGtt < 2:794279/289‑1 (MQ=255)
gTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGtt < 1:1712522/289‑1 (MQ=255)
gTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGtt < 2:65390/289‑1 (MQ=255)
cTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTat < 2:454909/289‑1 (MQ=255)
acATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTatcat < 1:1395254/288‑1 (MQ=255)
acaacTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCAccc < 1:1301876/289‑1 (MQ=255)
aaaGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCC‑G‑AAAGCCTTCGTCACCCCCGCCAAAATTATTCTGATGCCGGCCGCCAATAACGGCCACGCCGCAGGAACGACGCCCACCGGTAACCATTCTGATCCGCGATTTCG‑TATCATTCACCCCCTGCCGCTCGAcc > 2:1855551/1‑288 (MQ=255)
cTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGt > 1:1167700/1‑235 (MQ=255)
ttttGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATTCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTTACGATTATGAA‑CGCCGTGTCGTTAATATCAGCACCCTGCGTCTCGACC‑AACTGc > 1:1261019/1‑288 (MQ=255)
ttttGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGGTCGACGCCCAACGGGAACGATTATGAT‑CGCGATGTCGGTATCATCAGCAACCTGCGGCCCGACa‑aaccgc > 1:787081/1‑283 (MQ=255)
ttttGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCa < 1:1920888/289‑1 (MQ=255)
ttttGAATCAATCTGATCGTCTGGGGGGTTCTTCACCCCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCa < 2:1255868/289‑1 (MQ=255)
cTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCa < 1:679791/289‑1 (MQ=255)
tCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAggg < 1:1029472/288‑1 (MQ=255)
cTGGTGGGTTCTTCACCCCTGCTCACCGATCCCGCAAAAACGGCACGCTATCGAAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAGCGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAAc < 2:1669025/289‑1 (MQ=255)
cTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACa < 1:819739/262‑1 (MQ=255)
gggTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGt < 1:1222506/288‑1 (MQ=255)
tGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGGTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCgg > 1:27562/1‑288 (MQ=255)
cTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGca < 1:644666/289‑1 (MQ=255)
cTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCCCCGACAAAATTATTCTCATGCAGGCCGCCAATACAGGCCTCACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CCCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAATGGCGAACAGGTG‑CTTGCCTATCCGGGc > 1:163782/1‑288 (MQ=255)
cTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGGCACCGCCGACAAAATTATTCTGATGCAGGCCGCCCATACAGGCCTGACCGACGGAACGACGCCAAACGGGAAAGATTATGAA‑CGCGACGTCGTTATCATCAGCACACCGGCTCCCGACC‑AACTGCACGTTCGTGGCCACGGGGAACAGGGG‑GCTGCCTATCCgcgc > 2:810675/1‑288 (MQ=255)
cTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGGGCT‑G‑AAAGCCTGCGTCCCCGCCGCCAAAATTATTCTGATGCAGGCCGCCAATAAAGGCCTGACCGAAGGGACGAGGCCACACGGTAACGATTATGAT‑CTGGATGTCGGCATCATAACCACCACTCGTCCCGACC‑AGCTTCACGGTCTTCGCCAGGGCGAACAGGTG‑CTGGcttctcaggca > 2:35632/1‑278 (MQ=255)
cACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGcacc < 1:942892/289‑1 (MQ=255)
cGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCC‑G‑AAAGCCTGCGTCACCGCCCACAAAAATATTCTGATTCAGGCCGCCAATACCGGCCTGACCGAAGGATCGACGCCCAACGGGAAAGAATATGAA‑CGCCATGTCTGTAACATTCACACCCACCGTCTCCACACAGC‑ACCCAGTCCTGGCCAGGGCGAACAGGGG‑CGGGCCTCTCCGGGcacccc > 2:428013/1‑286 (MQ=255)
aTCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGc > 1:1051920/1‑288 (MQ=255)
ccGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAACGATGCCAAACGGTAACGATTATGAT‑CGCGATGTCGGTATCCACCTCCCCCCTCGGCCCGGCA‑AACTGCACGTTCTTGGCAAGGGCGAACCGGGG‑CTGGCCCATCCGGGCACCACGctcca > 2:226694/1‑287 (MQ=255)
ccGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGGGCG‑G‑AAAGCCTGCGGCACCGCCGCCCAAATTATTCTGATGCAAGCCGCCAATACAGGCCCTACCGAAGGAACGCTGCCCAACGGTAACGATTAATAA‑CGCGATGTCGGTCTCATCAGCACCCCGCGTCCCCACA‑ACCCGCACGTTCTTTGGAAGGGCGAAGCGGGC‑ATGGCCCATTCGGGCACCCCGcccc > 2:205985/1‑285 (MQ=255)
cGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCa < 1:268365/289‑1 (MQ=255)
aaGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCaaa < 1:115290/288‑1 (MQ=255)
ttCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGGTCGACGCCAAACGGTAACGATTATGAT‑CGCGATGGCGTTATCATCAGCAACCCGCGTCTCGACA‑AGCTGCACGCTCTTGGCAAGGGCGAACAGGGG‑CTGGCCTATCCGGGCACCACGAGCTATTCGCCGGGAAAAGCCCTCAAACCGCCgg > 1:312792/1‑289 (MQ=255)
ttCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCggg < 1:187292/248‑1 (MQ=255)
tCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑T‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCCCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGGG‑CTGGCCTATCCGGGCACCCCGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTggg > 1:1418799/1‑289 (MQ=255)
tGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCCCCCATACAGGCCTGACCGAAGGAACGACCCCCAACGGTAACGATTATGAC‑CGCGATGTCGTTATCATTAGCACCCCGCGTCTCGACA‑AACTTCCCGGTTTCTGCAACGGCCGAAAGGTGCCTGCCCAACCCGGCCACCCCCCCCTATCGCTGGCAAAAAGCCCCCACCCCGcggcaccgcta > 2:1789756/1‑279 (MQ=255)
gggTAAGGGCGACGCGCTCGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGaa < 2:1022133/288‑1 (MQ=255)
ggCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCa > 1:1087581/1‑194 (MQ=255)
gcggcgCGCTGGCTGTCGTTTTCCCTGGTCAACTACTGGAATTGGGGCGGTTGCT‑G‑AAAGCCTGCGTCACCGCCGAAAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGTT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGca < 2:822139/286‑1 (MQ=255)
gCGAGGGGCTGGCTGCGGTTTGCCCTGGCTCAGTGCTAGAATGGTGGCGGGTGCG‑G‑AAAGCCTGGGTCACCGCCGACAAAATTATGCTGATGCAGGCCGCCAATACAGGCCTGACGGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGcact < 2:787081/288‑2 (MQ=255)
gCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGcact < 1:1562665/288‑2 (MQ=255)
gCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGca < 1:71208/286‑1 (MQ=255)
cgcgCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGcactcagtg > 1:496534/1‑283 (MQ=255)
gcgcTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGcactcagtga < 1:1791962/289‑8 (MQ=255)
tggctgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGGTGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTgg > 1:1951612/1‑289 (MQ=255)
ggctgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGa < 1:1021414/289‑1 (MQ=255)
ggctgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGa < 1:614523/289‑1 (MQ=255)
ggctgTAGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCGGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGa < 1:414604/289‑1 (MQ=255)
tgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca < 1:428013/289‑4 (MQ=255)
tgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca < 2:1423640/289‑4 (MQ=255)
tgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCAGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca < 1:1483841/289‑4 (MQ=255)
tatCGTTTTCCCTGGCTAACTACTTGAAATGTGGCGGGTGCT‑G‑CAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCAAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca < 2:560583/287‑4 (MQ=255)
gTCGTTTGTCCTGGCTCACTACTAGAATTGGGGCGGTGGCT‑G‑AAAGCCTACGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatca < 2:1001158/288‑4 (MQ=255)
tCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGACACCGCCGACAAAATTAGTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGatcatc < 1:1888032/289‑6 (MQ=255)
tCCCTGGCTCACTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCCAAACGTAACGATTATGAT‑CCCGATGTCGTTATCATCAGCCCCCTGCGTCTCCACC‑ACCTGCACGCTCTTGGCCAGGGCGAACAGGTG‑CTGGCCTATCCGGGGCCCACGCGCTATTCGCTCGAAAAAGACCCCAAACCGCTCGGACACCAACCGCACCCCGTGCTTGGatcaacctgtat > 2:599171/1‑278 (MQ=255)
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AGAGAGAAAAAGAATGCTCAGTTTATTGTCTGAATTTTCAAAATATTCACTCGCTGAATTGTTATACAAGGCGCTATTCTAGTTTGTGATATTTTTTCGCCACCACAAGGAGTGGAAAATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTAGTCACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCAGTCTACTAGAATTGTGGCGGGTGCT‑G‑AAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGAAGCACGCCAAACGGTAACGATTATGAT‑CGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACA‑AGCTGCACGTTCTTGGCAAGGGCGAACAGGTG‑CTGGCCTATCCGGGCACCACGCTCTATAGCCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACAGTGTGATTGGAAGTAGCTGTAT > CP042583/1796978‑1797535
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
