Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,800,039 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,800,0390GC99.6% 566.0 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (119/123);  total (121/123)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,800,0400CG99.6% 570.8 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (119/123);  total (121/123)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,800,0410TA100.0% 577.6 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (121/123);  total (121/123)

Only 100 of 244 total aligned reads displayed.

AAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTTTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTGCTACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGACTCGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTA  >  CP042583/1799759‑1800317
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
aaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGGAGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTaga                                                                                                                                                                                                                                                                                <  2:319771/289‑1 (MQ=255)
aaaGAAACTCGAAATTTCGGCATGATGAGAATTCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTaga                                                                                                                                                                                                                                                                                <  2:174753/289‑1 (MQ=255)
 aaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTagag                                                                                                                                                                                                                                                                               <  1:1788151/289‑1 (MQ=255)
  aGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAATAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCAATTCCAGTACCAGCCCGCCACTCGCCAGCGCCGAACTAgaga                                                                                                                                                                                                                                                                              >  2:568678/1‑289 (MQ=255)
     aaCTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGc                                                                                                                                                                                                                                                                           <  1:371456/289‑1 (MQ=255)
                                  aGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTATGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAgg                                                                                                                                                                                                                                              <  1:1816379/289‑1 (MQ=255)
                                     tAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGaa                                                                                                                                                                                                                                            >  1:720131/1‑288 (MQ=255)
                                       gTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGc                                                                                                                                                                                                                                          >  2:822662/1‑288 (MQ=255)
                                        tGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCt                                                                                                                                                                                                                                         <  2:1711114/288‑1 (MQ=255)
                                         gtatCACGCGCACCGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACGTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCt                                                                                                                                                                                                                                         <  2:194916/284‑1 (MQ=255)
                                         ggTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATATACTGAGGCTAGAGACGACATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCTCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGGGAAGCTAAGGCCTTCCTCTTTGTTGGTATTCAGGAAGCTCg                                                                                                                                                                                                                                       <  1:930976/289‑1 (MQ=255)
                                          gTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCgg                                                                                                                                                                                                                                      >  1:810742/1‑289 (MQ=255)
                                          gTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATAGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCgg                                                                                                                                                                                                                                      >  1:1508543/1‑289 (MQ=255)
                                           ttCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGGGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCgg                                                                                                                                                                                                                                      <  2:1912112/288‑1 (MQ=255)
                                             cACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTCCCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTCCCTCTTTGTTGATATTCCGGAGGCCCGGaaa                                                                                                                                                                                                                                   >  2:1172668/1‑288 (MQ=255)
                                               cgcgCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATAc                                                                                                                                                                                                                                 <  1:1404088/289‑1 (MQ=255)
                                               cgcgCACGGGTTGCGCAACGGCGGAGTAAGGATTTACTGGGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGAGATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATAc                                                                                                                                                                                                                                 <  2:1480567/289‑1 (MQ=255)
                                                   cACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATCCTGCATTGCTGACATTTACGCCAGCAATGAAACGCCAAAAAACTTTCTAGAACAAACGATAACCGTACCCCCAAAGAAAAACGGTTAGGGCAAGCAGCACTTCAAGTACCAGCCCCCCACCCCCCAGCGCGCAAATGAGGAAATCAAGGCCTTCCCCTTGGTTTAATTCCAGAAACACCGGAACACCAAg                                                                                                                                                                                                                             >  2:80289/1‑289 (MQ=255)
                                                               acggccgGAGTAAGGATTTACTAAGGCTAGCGACTCCATCATAACGAGCAAAAAGTACGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGAAGCACTTCCAGTACCAGCACACCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTa                                                                                                                                                                                                                 <  1:500124/286‑1 (MQ=255)
                                                                ccgccgGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCTAACTAGAGAAGCTAAGGCCTTCCTCTTTCTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGAAGGTa                                                                                                                                                                                                                 >  2:1704533/1‑288 (MQ=255)
                                                                 cgccgGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGc                                                                                                                                                                                                               <  1:1588550/289‑1 (MQ=255)
                                                                 cgccgGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGc                                                                                                                                                                                                               <  2:1654944/289‑1 (MQ=255)
                                                                 cgccgGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGc                                                                                                                                                                                                               <  1:108821/289‑1 (MQ=255)
                                                                  gccgGAGTAAGGATTTACTGAGGCTAGCGACGCCCTCATAACGCGCAAAAAGGGAGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTAAAAGAACTTTCTAGAACAAACGATAATCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAACGTCGAACTAGCGAAGCAACGGCACTCCTCTTTGTTGGTATTCGGAAAGCGCGACATACAACGTGAAAGCatgactcc                                                                                                                                                                                                              >  2:524276/1‑282 (MQ=255)
                                                                    cgGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCg                                                                                                                                                                                                             <  1:1713411/288‑1 (MQ=255)
                                                                      gAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTa                                                                                                                                                                                                                                                                         <  2:729367/226‑1 (MQ=255)
                                                                                 tACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAgcg                                                                                                                                                                                                >  1:1247593/1‑288 (MQ=255)
                                                                                 tACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAgcg                                                                                                                                                                                                >  1:650801/1‑288 (MQ=255)
                                                                                       ggCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTa                                                                                                                                                                                                                                                                         >  1:1170783/1‑209 (MQ=255)
                                                                                           aGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCg                                                                                                                                                                                     >  1:753623/1‑289 (MQ=255)
                                                                                                     tcatAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGcac                                                                                                                                                                           <  1:1420065/289‑1 (MQ=255)
                                                                                                     tcatAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGcac                                                                                                                                                                           <  1:1637805/289‑1 (MQ=255)
                                                                                                     tcatAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGcac                                                                                                                                                                           <  2:753623/289‑1 (MQ=255)
                                                                                                     taaaaaCGCGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGTGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAATCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGcac                                                                                                                                                                           <  2:1541030/285‑1 (MQ=255)
                                                                                                      catAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCa                                                                                                                                                                                             >  1:1751952/1‑270 (MQ=255)
                                                                                                          aCGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAac                                                                                                                                                                      <  1:1272225/289‑1 (MQ=255)
                                                                                                             aGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAACCCGGAATACCCAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCAACGTGCCGACCCGCGCACCAAaccaa                                                                                                                                                                   >  2:1191022/1‑288 (MQ=255)
                                                                                                                 aaaaGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAaccagacca                                                                                                                                                               >  2:797593/1‑289 (MQ=255)
                                                                                                                 aaaaGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGAAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAaccagacca                                                                                                                                                               <  2:930333/289‑1 (MQ=255)
                                                                                                                           tCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAg                                                                                                                                                     <  1:787153/289‑1 (MQ=255)
                                                                                                                           tCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAg                                                                                                                                                     <  1:297879/289‑1 (MQ=255)
                                                                                                                                       aaTCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGAcc                                                                                                                                         >  1:386817/1‑289 (MQ=255)
                                                                                                                                        cacaagatgAAATGCGACCTTGCGCAAATTTACCCCAGCAATGACAAGTAAAAGAACTTTCTAGAACAAACGCTAACCGTAGCCCCATAGTCTAACGGGTAGGGCAAGCAGGACTGCCAGGACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCGCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGAc                                                                                                                                          <  2:1043025/279‑1 (MQ=255)
                                                                                                                                        aTCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGAc                                                                                                                                          <  2:1265555/287‑1 (MQ=255)
                                                                                                                                        aTCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGAc                                                                                                                                          <  1:342124/287‑1 (MQ=255)
                                                                                                                                        aTCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGAc                                                                                                                                          <  2:375650/287‑1 (MQ=255)
                                                                                                                                         tCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGAGCACACAACCAGACCAGTGGATAAAGCGccaccaacccg                                                                                                                                        >  2:1108895/1‑283 (MQ=255)
                                                                                                                                              aGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTaaa                                                                                                                                  >  1:169540/1‑289 (MQ=255)
                                                                                                                                                             gCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCCGTGAATAAAGCACCACCAGACCGCTAAAAAACACCGAAGTAGCa                                                                                                                   >  2:1731346/1‑289 (MQ=255)
                                                                                                                                                                          ccAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGa                                                                                                      <  2:386817/289‑1 (MQ=255)
                                                                                                                                                                           cAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGa                                                                                                      <  1:1327292/288‑1 (MQ=255)
                                                                                                                                                                           cAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGa                                                                                                      <  2:483868/288‑1 (MQ=255)
                                                                                                                                                                           cAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGa                                                                                                      <  1:1766421/288‑1 (MQ=255)
                                                                                                                                                                                  gCAACGTCAACGAACTTCCTAGAACAAACGTTAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCGTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCACGAAGACCATg                                                                                              <  2:906836/289‑1 (MQ=255)
                                                                                                                                                                                      cGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGcac                                                                                                                                                                           >  2:695237/1‑208 (MQ=255)
                                                                                                                                                                                      cGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGcac                                                                                                                                                                           <  1:695237/208‑1 (MQ=255)
                                                                                                                                                                                           aaGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAg                                                                                                             >  2:1577769/1‑265 (MQ=255)
                                                                                                                                                                                                  ttctAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAACGCGAAACCAGACCGCATAAAAACAGCGGAGTTGCACCGTAGCCAGCGAAGACCCTGAAGCGCGCAAgcgacg                                                                              >  2:1888048/4‑284 (MQ=255)
                                                                                                                                                                                                    ctAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAGGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAgtgacgga                                                                            <  1:1172668/288‑8 (MQ=255)
                                                                                                                                                                                                                         gCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGAGGAGTTGAAACGTAGCCCGCACAGACCATGCAACGCGCAAGTGCAGGACGCTGCGGAAAATTACGCGcc                                                       >  2:896383/1‑289 (MQ=255)
                                                                                                                                                                                                                           cccATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCa                                                      <  1:841662/288‑1 (MQ=255)
                                                                                                                                                                                                                               tAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATcca                                                  >  1:287829/1‑288 (MQ=255)
                                                                                                                                                                                                                               tAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCGCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAAAAGCGCCACCGTGCCGACAAGCGCACACAACCAGACCAGTGGATAATGCGCCACAAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCAGCGAAGACCATGCAGTGCCCAAGTGACGGAAGCTGCGGACTATTGCGGACCATcca                                                  >  2:1394269/1‑288 (MQ=255)
                                                                                                                                                                                                                                     aaCGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGcc                                                       <  2:1350357/277‑1 (MQ=255)
                                                                                                                                                                                                                                       cGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGa                                          >  1:1477740/1‑288 (MQ=255)
                                                                                                                                                                                                                                        ggTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGAcc                                        <  1:896383/289‑1 (MQ=255)
                                                                                                                                                                                                                                        ggTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGAcc                                        <  1:608243/289‑1 (MQ=255)
                                                                                                                                                                                                                                        ggTTAGGGCGAGCAGCACATCCGGAACCAGCACGCCAATCGCCAGCGTCGAACTAAAGAAGCTAAGACGTTCCTCTTTGTTGAGATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCt                                                                        <  2:1306225/257‑1 (MQ=255)
                                                                                                                                                                                                                                        ggTTAGAGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCATCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGAcc                                        <  1:1394269/289‑1 (MQ=255)
                                                                                                                                                                                                                                          ttAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGAccc                                       >  1:430427/1‑288 (MQ=255)
                                                                                                                                                                                                                                          ttAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGAccc                                       >  1:1857277/1‑288 (MQ=255)
                                                                                                                                                                                                                                          ttAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGAccc                                       >  2:767684/1‑288 (MQ=255)
                                                                                                                                                                                                                                           tAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGGCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCg                                      <  1:1039908/288‑1 (MQ=255)
                                                                                                                                                                                                                                            aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTa                                                                                                                                                                                                                          <  2:1496932/107‑1 (MQ=255)
                                                                                                                                                                                                                                            aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                     >  1:1359039/1‑288 (MQ=255)
                                                                                                                                                                                                                                            aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                     >  1:1453390/1‑288 (MQ=255)
                                                                                                                                                                                                                                            aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                     >  2:1434182/1‑288 (MQ=255)
                                                                                                                                                                                                                                            aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                     >  2:118252/1‑288 (MQ=255)
                                                                                                                                                                                                                                            aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                     >  1:1623201/1‑288 (MQ=255)
                                                                                                                                                                                                                                            aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                     >  1:986670/1‑288 (MQ=255)
                                                                                                                                                                                                                                            aGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGc                                     >  1:957877/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  agcagcACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATc                               >  2:1140662/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  agcagcACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGAACAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGATTTGCCACGTAGCCCGCGCAGACAATGCAGTGCACAAGTGACGGACGCTGCGGATAATGAGTCTCCAACCACCAGATGACCCGCCCCacc                               >  2:842687/1‑286 (MQ=255)
                                                                                                                                                                                                                                                   gcagcaCTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCa                              >  1:454688/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   gcagcaCTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCa                              >  1:847362/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          ttCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGAcc                      <  1:805905/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          ttCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGAcc                      <  1:767684/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            ccAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGc                                                                                                                                                                                                               >  2:631849/1‑102 (MQ=255)
                                                                                                                                                                                                                                                                 aCCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCccagc                 <  2:169540/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ccAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCAt                                >  1:1569249/1‑271 (MQ=255)
                                                                                                                                                                                                                                                                    aGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATCAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCACCCAACAGACGCCCCGCCCCAGCCACCCGACCCCAACCAACa            >  2:96943/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    aGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAg                                                                                                             <  1:1870339/192‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAg                                                                                                             >  2:1870339/1‑192 (MQ=255)
                                                                                                                                                                                                                                                                      cACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAg                                                                                                                                                     <  1:913704/150‑1 (MQ=255)
                                                                                                                                                                                                                                                                      cACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAg                                                                                                             <  1:253289/190‑1 (MQ=255)
                                                                                                                                                                                                                                                                      cACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCa                                                                                            <  2:103116/207‑1 (MQ=255)
                                                                                                                                                                                                                                                                      cACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCa                                                                                            >  1:103116/1‑207 (MQ=255)
                                                                                                                                                                                                                                                                      cACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTAcg                                                           <  2:337493/240‑1 (MQ=255)
                                                                                                                                                                                                                                                                      cACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCCTa          >  1:549508/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       aCGACAATCGCCGGCGTCGAAGTAGAGAAGCTAATGTCTTCCTCTTTGTTGATATTCAGGAAGCGCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGCCCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGTGACGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATaa         <  2:1857277/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
AAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTTTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTGCTACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGAATACCAAGGTAAAGCAGGTAGCCGGTGTAAAACAGCGCCACCGTGCCGACCAGCGCACACAACCAGACCAGTGGATAAAGCGCCACCAGACCGCTTAAAAACAGCGGAGTTGCAACGTAGCCCGCGAAGACCATGCAGTGCGCAAGACTCGGACGCTGCGGATAATTACGCGCCATCCACCAGATGACCCGCCCCATCACCGCGACCCCAGCCAGCATAACGCCGTA  >  CP042583/1799759‑1800317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A