Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,929,670 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,929,6700GC98.8% 571.4 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/2);  new base C (111/135);  total (112/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,929,6710CG98.4% 565.7 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/2);  new base G (110/135);  total (112/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,929,6720TA99.6% 577.9 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (111/136);  minor base G (0/1);  total (112/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 249 total aligned reads displayed.

AACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATATCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAAGCTCGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGGCTA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTG  >  CP042583/1929397‑1929949
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                      
 aCAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATATCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTgcg                                                                                                                                                                                                                                                                         <  1:1003457/289‑1 (MQ=255)
   cgCGACAAAGTCCGCTCCCCACCCCAGGCCTTGCTGCGCCACATCAGGAGCCACAGCCAGAAAACCAGCCGCTGTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGcc                                                                                                                                                                                                                                                                       <  2:1354289/288‑1 (MQ=255)
       aaaaaGTGCGCTCCCCCCGCCAGGCATTGCTGCGCCATATCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGt                                                                                                                                                                                                                                                                   <  2:1568941/287‑1 (MQ=255)
                                aTTGCGCCGCCATATCCGGCACAAAATCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGACGATTACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAgcgcg                                                                                                                                                                                                                                           <  2:200764/288‑1 (MQ=255)
                                  tgctgcGCCATATCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCaa                                                                                                                                                                                                                                                          <  2:1923988/271‑1 (MQ=255)
                                  tgctgcGCCATATCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCa                                                                                                                                                                                                                                         >  1:1574090/1‑288 (MQ=255)
                                   gctgcGCCATATCCGGCGCCACCGCCAGAAACCCAGGCGCTTTACCCGCACGACGGCTCCGGCGAATAATGGTTTCAATGATTCGCTGCACTGCCGGGTGCCCGGTGTTATCCGGGTAGCCCAACGAGGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGAACCAACAGACAACGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGc                                                                                                                                                                                                                                       <  2:188540/289‑1 (MQ=255)
                                   gctgcGCCATATCCGGAGCCACAGCCAGAAAACCCGCCGCTTTACCCGCAGGACGGATCCGCCGAATACGTGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGc                                                                                                                                                                                                                                       <  2:347069/289‑1 (MQ=255)
                                   gctgcGCCATATCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAg                                                                                                                                                                                                                                        >  1:75381/1‑288 (MQ=255)
                                       cgcCATATCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGt                                                                                                                                                                                                                                   >  1:1674029/1‑289 (MQ=255)
                                       cgcCATATCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATGCTCAATGCGTCCCCACCGCGCAGCCCg                                                                                                                                                                                                                                    >  1:1925460/1‑288 (MQ=255)
                                        ggcatagcaagctccACAGCCAGAAGACCAGCCGCTTTACCCGCAGCACGGATCCACCTAATACTCGTTTCAATAATTCGCGGCACTTCCGTGTGCCCGGCGTTATCCGGGTAGCCCGACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTg                                                                                                                                                                                                                                  <  2:234233/276‑1 (MQ=255)
                                            tatCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCcac                                                                                                                                                                                                                              >  1:1101121/1‑289 (MQ=255)
                                             atCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCcaca                                                                                                                                                                                                                             <  2:75381/289‑1 (MQ=255)
                                               cAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACt                                                                                                                                                                                                                           <  1:929700/289‑1 (MQ=255)
                                                   aGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGc                                                                                                                                                                                                                        <  2:1101121/288‑1 (MQ=255)
                                                    gCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGcc                                                                                                                                                                                                                       >  1:702888/1‑288 (MQ=255)
                                                      cacaGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTGTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCTACAGACAAAGCGAA‑TCGTTACCTTGCGCCATGTAATTCATAATGCGTCCCCACGTCGCAGCCGGTGCCacacctgcgca                                                                                                                                                                                                                     >  2:1096454/1‑281 (MQ=255)
                                                            cacaaaaCCAGCCGCTTTACCCACAGCACGACTCCCCCGAATACTGGTTTCAATGATTCGCTGCACTTCCGGGTGCCCCGCTTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGaca                                                                                                                                                                                                                 <  2:1759436/283‑1 (MQ=255)
                                                                aaacacacaccatcaCCCGCAGTACAGATAATCCAGATACGGGTGTAAATAGATCGCAGCACTTCCGGGTGCACGCCGTAATCCGGGTAGACCAAAGACGCAGCAAGAGCCTCAAATCCAATAAACACGCCATCCATCCCTTCGACGTCGAGGATTTCTACCACGTTATCCAGTGCCGTTTTACTTGCCACCTGAAACAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGACACGACACCACGCt                                                                                                                                                                                                          <  2:414837/275‑1 (MQ=255)
                                                                aaaCCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGc                                                                                                                                                                                                           <  1:397892/288‑1 (MQ=255)
                                                                aaaCCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCt                                                                                                                                                                                                          <  1:244154/289‑1 (MQ=255)
                                                                aaaCCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCt                                                                                                                                                                                                          <  2:771302/289‑1 (MQ=255)
                                                                aaaCCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCt                                                                                                                                                                                                          <  1:1881642/289‑1 (MQ=255)
                                                                aaaCCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCACGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGc                                                                                                                                                                                                           <  1:716830/288‑1 (MQ=255)
                                                                  aCCCGCCGCTTTACCGGCAGTACGAATCCGCCAAATACTGGTTTCAATAATTCGCTTCACTTCCGGGTTGCCGGCGTTAGCCGGGTAGCCCAACGACGCAGAAAGATCCGCAAGTCCAATAAACACGCCATCAATCCCTTCGACGTCGATGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCTCGCTCa                                                                                                                                                                                                        <  1:1441548/289‑1 (MQ=255)
                                                                    cAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCAcc                                                                                                                                                                                                      <  1:1335902/289‑1 (MQ=255)
                                                                     aGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGAATTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCaa                                                                                                                                                                                                                                                          <  1:1948533/236‑1 (MQ=255)
                                                                      gCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGt                                                                                                                                                                                                    <  2:647592/289‑1 (MQ=255)
                                                                        cGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGt                                                                                                                                                                                                    <  1:623730/287‑1 (MQ=255)
                                                                         gCTTTACCCGCATAACTGAACCGCCCAATACTGGTTTCAATAATTCGCTGCCCGTCCGGGTGCCCGGCGTTAACCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAgg                                                                                                                                                                                                 <  2:1182662/289‑1 (MQ=255)
                                                                          cTTTACCCACAGGACGGATCCCCCAAATACTGGTTTAAATCATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAgg                                                                                                                                                                                                 <  2:1394530/288‑1 (MQ=255)
                                                                                                ccgAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGacac                                                                                                                                                                           >  1:9469/1‑288 (MQ=255)
                                                                                                     tACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCCCACCGCAGGGAGGATAGCGCGTGGCAGACCCCACCt                                                                                                                                                                      >  2:271812/1‑288 (MQ=255)
                                                                                                      aCTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGa                                                                                                                                                                    <  1:1751846/289‑1 (MQ=255)
                                                                                                             tCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCTAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGt                                                                                                                                                                                                    <  1:1086239/250‑1 (MQ=255)
                                                                                                             tCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGCAAGCGCGTGGACGACCCCACCTGCCGTg                                                                                                                                                                >  1:1903119/1‑286 (MQ=255)
                                                                                                             tCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGCCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAACCACCACCCGACGTg                                                                                                                                                                >  1:522798/1‑286 (MQ=255)
                                                                                                             tCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCACTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCAGTGCCACACTGGCCCCGACCCCACGCCCACCGCAGGGCGGACAGCGCGTGGCAGACCCCACCTGACGTg                                                                                                                                                                >  2:940475/1‑286 (MQ=255)
                                                                                                                     tCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCa                                                                                                                                                     <  1:384478/289‑1 (MQ=255)
                                                                                                                                 cGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGGGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAAGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATc                                                                                                                                         <  1:936660/289‑1 (MQ=255)
                                                                                                                                 cGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATc                                                                                                                                         <  1:184867/289‑1 (MQ=255)
                                                                                                                                 cGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATc                                                                                                                                         <  2:80644/289‑1 (MQ=255)
                                                                                                                                 cGGGTGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTGGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATc                                                                                                                                         <  2:1159596/289‑1 (MQ=255)
                                                                                                                                     tGCCCGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCggg                                                                                                                                      <  1:1270105/288‑1 (MQ=255)
                                                                                                                                       cccGGCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCTGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATc                                                                                                                                   >  2:888303/1‑289 (MQ=255)
                                                                                                                                          ggCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTCACTTGCGCCATCTAATTCTCAATCCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCCCCGCACGCACGATCGCGCCTGGCAGACCCCACCTGACGTCCCTGTTCGGCAGCACCCACCATCGCTATCac                                                                                                                                 >  2:539699/1‑287 (MQ=255)
                                                                                                                                          ggCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGt                                                                                                                                >  1:138313/1‑289 (MQ=255)
                                                                                                                                          ggCGTTATCCGGGTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGt                                                                                                                                >  1:1132860/1‑289 (MQ=255)
                                                                                                                                                     ggTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCt                                                                                                                                                                                                          <  1:1197796/204‑1 (MQ=255)
                                                                                                                                                      gTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACCCCACCTGACGTGCCTGTCCGGCAGTATCGACCACTGGGGTCAGGAGAGGTTgcgc                                                                                                                     >  2:1050131/1‑288 (MQ=255)
                                                                                                                                                      gTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTgcgc                                                                                                                     >  1:1425870/1‑288 (MQ=255)
                                                                                                                                                      gTAGCCCAACGACGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCCCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCCGACGTGCCCGCTCGGCAGGAACGACCACCGGGGTCAGCAGAGTTTgccc                                                                                                                     >  2:1926567/1‑286 (MQ=255)
                                                                                                                                                          cccaacgacGCAGAAAGATCCGCAGGTCCAATAACCACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCACCAGCGCGCAGCCCGTGCCACACGCGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCaa                                                                                                                >  1:964853/9‑289 (MQ=255)
                                                                                                                                                          cccaacgacGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCaa                                                                                                                >  1:1704570/9‑289 (MQ=255)
                                                                                                                                                           ccaacgacGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCa                                                                                                                 <  1:1412204/280‑1 (MQ=255)
                                                                                                                                                               cgacGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCggg                                                                                                                                      >  2:461510/4‑262 (MQ=255)
                                                                                                                                                               cgacGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCggg                                                                                                                                      <  1:461510/259‑1 (MQ=255)
                                                                                                                                                                  cacAGAGAGACCCGCAGGTCCAATTAACGCGCCATCAAGCCCTTGGTACACGAGGATTTCCTCCAGCTTATCCAGTGCCGTTTTACGTTCCACCTGCACCAACAGAAAAAGGGAA‑CCGTTAACTGGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATcc                                                                                                           <  2:680214/284‑1 (MQ=255)
                                                                                                                                                                    cAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAgg                                                                                                        >  1:869740/1‑287 (MQ=255)
                                                                                                                                                                    cAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAgg                                                                                                        >  1:768400/1‑287 (MQ=255)
                                                                                                                                                                                 aGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAg                                                                                          <  1:99892/288‑1 (MQ=255)
                                                                                                                                                                                       aaTAAACCCGCCATCAATCCCTTCGCCGTCGGGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTa                                                                                   <  2:1068318/289‑1 (MQ=255)
                                                                                                                                                                                        aTAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGttt                                                                                    >  1:1114463/1‑287 (MQ=255)
                                                                                                                                                                                             cacGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAgg                                                                                                                                                                                                 >  2:1629863/1‑173 (MQ=255)
                                                                                                                                                                                             cacGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATATAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCt                                                                             >  2:585259/1‑289 (MQ=255)
                                                                                                                                                                                              acGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCt                                                                             >  1:1839034/1‑288 (MQ=255)
                                                                                                                                                                                                gCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGGTTACTGCCTTc                                                                           >  1:1051050/1‑288 (MQ=255)
                                                                                                                                                                                                 ccATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGc                                                                                                                                                                                                                                       >  1:278306/1‑131 (MQ=255)
                                                                                                                                                                                                      aagcccgtctgcatCGGGGGTTCCGTCCAGGTTATCCAGTGCCATTTGACTTTCCACCTGCACCAACCGACAAAGCGAA‑TCCTTATCTCGCGCCATGTAATTCCCAATGCGTCCCCAGCGCGCAGCCCGGGCCCCACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCGGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACcgga                                                                    <  2:380470/276‑1 (MQ=255)
                                                                                                                                                                                                       aTCCCTTGGACGTCGAGGATTTCGTCCAGGTTATCCAATGCCGTTTTCCTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCCGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACcggac                                                                   <  1:26590/289‑1 (MQ=255)
                                                                                                                                                                                                          ccTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACcggacgga                                                                >  1:1719412/1‑289 (MQ=255)
                                                                                                                                                                                                              cGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGCCTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCAc                                                            >  1:1041667/1‑289 (MQ=255)
                                                                                                                                                                                                                 cGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACggg                                                         <  1:689322/289‑1 (MQ=255)
                                                                                                                                                                                                                  gtgggggATTTCGTCCAGGGTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑GCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACggg                                                         <  2:1839034/283‑1 (MQ=255)
                                                                                                                                                                                                                  gacgtggATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCAACCGGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGCCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACggg                                                         <  2:738654/283‑1 (MQ=255)
                                                                                                                                                                                                                     gagtattcggTCCAGGTTCTCCAGGCCCGTGTTACTTTCCCACTGCACCAACAGACAAAGCGAC‑ACGTTAACTTGCGCCAGGTAAGTCTCAAAGCGTCCCCAGCGCGCAGCCCGTGCCAGACTGGCCCCAACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTtgg                                                     <  2:21169/280‑1 (MQ=255)
                                                                                                                                                                                                                     gAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACGTTCCTCCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTCCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTtgt                                                     <  1:672640/289‑2 (MQ=255)
                                                                                                                                                                                                                               tCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCTGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAgg                                           <  1:21800/289‑1 (MQ=255)
                                                                                                                                                                                                                                    gTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGgcgc                                       >  1:34373/1‑288 (MQ=255)
                                                                                                                                                                                                                                     ttATACAGTGCCGTTTGCACACCCACCAGCACCAACAGA‑ACACGCGACGCGTGAACTGGCGCCATGAAACACTCAGTGAGTCCCCCGCGCGCAGCCCGTGCCACAGGCGACCCGACACCACGCTTAGCGGAGGGAGGATAGCGCGTGGAATACTCCATCTGCCGTGCCTGTTCGGCAGTGTCGACCATCGGGATCAGTAGAGTTTGCGCACTAATAACCAGGACTTGTTTAATCAGAGGTTTACTGACTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTa                                     <  2:179498/289‑1 (MQ=255)
                                                                                                                                                                                                                                      tATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTa                                     <  2:1114463/288‑1 (MQ=255)
                                                                                                                                                                                                                                       aTCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTAc                                    >  2:294464/1‑288 (MQ=255)
                                                                                                                                                                                                                                        tCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTAcc                                   >  1:1322059/1‑288 (MQ=255)
                                                                                                                                                                                                                                             tGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTa                                     >  2:1642126/1‑281 (MQ=255)
                                                                                                                                                                                                                                             tGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTa                                     <  1:1642126/281‑1 (MQ=255)
                                                                                                                                                                                                                                             tGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGt                             >  1:369393/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ccattttACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGa                                                                                                                                              <  2:246166/171‑1 (MQ=255)
                                                                                                                                                                                                                                               ccGTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCCCCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTTCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGCCTTGTTTAATCAGCGCTTTCCTGCCTTCCCCGCGCCGGACCACGGTGTGGCGGGGATCTGGCGCTACCGCCTgca                            >  2:43306/1‑286 (MQ=255)
                                                                                                                                                                                                                                                 gTTTTACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGTGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCt                         <  1:474545/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 gTTTTACTTCCCCCCTCAACCACCAGCCAAAGCGAT‑TCGTTAACTTGCGCCATGTAAGTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCt                         <  2:9469/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  ttttACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCCGTATCGACCATCGGGATCAGTAGCGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGAGGTTTACTGACTTCCACCGGACGGATCTCGGGTTGGCTGGCATAGTGCGCTACCGCCTGTAGccg                        >  2:1307916/1‑287 (MQ=255)
                                                                                                                                                                                                                                                  ttttACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATc                                                                                                                                         <  1:1494031/176‑1 (MQ=255)
                                                                                                                                                                                                                                                  ttttACTTTCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATc                                                                                                                                         >  2:1494031/1‑176 (MQ=255)
                                                                                                                                                                                                                                                          tCCACCTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCACTATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCTGACGGATCACGGGTTGGCTGGCTTAGGGCGCTACCCCCTGTAGCTGATCATaaa                >  2:1202436/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              ccTGCACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATc            <  2:408806/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  cACCAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGa        >  1:1932052/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    ccAACAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAAt      <  2:1322059/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       aCAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCAGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTGGTTTAATCAGCGGTTTACTGCCGTCCACCGGACGGATCACGGGTTGGCTGGCCAAGGGCGCTACCACCCGTAGCGGATGGCAAGGACACTGAATggg   >  2:886955/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                        cAGACAAAGCGAA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCGACCGCCTGTAGCTGATGATAAAGATCCTGAATGgtg  >  1:571601/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                      
AACAGCGACAAAGTTCGCTCCCCACGCCAGGCATTGCTGCGCCATATCAGGAGCCACAGCCAGAAAACCAGCCGCTTTACCCGCAGCACGGATCCGCCGAATACTGGTTTCAATAATTCGCTGCACTTCCGGGTGCCCGGCGTTATCCGGGTAGCCCAAGCTCGCAGAAAGATCCGCAGGTCCAATAAACACGCCATCAATCCCTTCGACGTCGAGGATTTCGTCCAGGTTATCCAGTGCCGTTTTACTTTCCACCTGCACCAACAGACAAAGGCTA‑TCGTTAACTTGCGCCATGTAATTCTCAATGCGTCCCCAGCGCGCAGCCCGTGCCACACTGGCCCCGACACCACGCTCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTG  >  CP042583/1929397‑1929949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A