Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,930,027 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,930,0270AT99.6% 622.4 / NA 264intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base T (112/150);  total (112/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,930,0280CG98.9% 606.7 / NA 264intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (111/148);  minor base T (1/2);  total (112/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,930,0290TA99.2% 611.8 / NA 264intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (111/149);  minor base G (0/2);  total (112/152)
Fisher's exact test for biased strand distribution p-value = 5.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 264 total aligned reads displayed.

TCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTACTGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGGCTACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGCAATAAACCCGCCCACTGCACCAAACAGGT  >  CP042583/1929749‑1930303
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                   
    cGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAg                                                                                                                                                                                                                                                                        >  2:838989/1‑289 (MQ=255)
     gTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGa                                                                                                                                                                                                                                                                       <  1:838989/289‑1 (MQ=255)
         ggaggaTAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCaa                                                                                                                                                                                                                                                                   >  2:435047/1‑289 (MQ=255)
              aTAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGc                                                                                                                                                                                                                                                              >  2:1933758/1‑289 (MQ=255)
              aTAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGc                                                                                                                                                                                                                                                              >  2:1674826/1‑289 (MQ=255)
                  cgcgTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACt                                                                                                                                                                                                                                                           >  1:1204850/1‑288 (MQ=255)
                  cgcgTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCATTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACAAATTTGCACt                                                                                                                                                                                                                                                           >  1:1091397/1‑288 (MQ=255)
                        gCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGccc                                                                                                                                                                                                                                                     <  1:673060/288‑1 (MQ=255)
                        gCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCt                                                                                                                                                                                                                                                    >  1:872558/1‑289 (MQ=255)
                            acacCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCACTTGCg                                                                                                                                                                                                                                                >  1:1108000/1‑289 (MQ=255)
                                  ccggACGGGCCTGGTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACg                                                                                                                                                                                                                                          <  1:251436/286‑1 (MQ=255)
                                  ccTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACg                                                                                                                                                                                                                                          <  2:1423114/289‑1 (MQ=255)
                                   cTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGt                                                                                                                                                                                                                                         >  1:1483448/1‑289 (MQ=255)
                                     gACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTc                                                                                                                                                                                                                                       <  2:1204850/289‑1 (MQ=255)
                                        gTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACAAATTTGCACTTCGCACTTGCGTACACGTTCttt                                                                                                                                                                                                                                    >  2:737184/1‑289 (MQ=255)
                                          gCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAATGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACCGACCAATTGGCACTTCGCCCTTGCGTAAACGTTCtgcaa                                                                                                                                                                                                                                  >  2:1790557/1‑285 (MQ=255)
                                          gCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAATGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTa                                                                                                                                                                                                                                   <  1:1790557/288‑1 (MQ=255)
                                           ccTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTCGCGTAAACGTTCTTTaaa                                                                                                                                                                                                                                 >  1:1773283/1‑289 (MQ=255)
                                            cTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGCTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTCATGATAAAGATCCTGAATGGTGTTTGGAGCGAGCCCTCCGTCAATCAGCAACCCGTCATAACCAAAAGTGGCGGCAATTTATGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGATCAATTTGCATCTCGCCCTTGCGTAAACGTTCTTTAAAg                                                                                                                                                                                                                                >  2:1763641/1‑289 (MQ=255)
                                             tgtttgcaaGTATCGACATTCGGGGTCAGTAGAGTGTGCGCGCCAATATCCAGGACTGTTTTAATCAGCGGTTTACTGCCTTCCACCGGACGAATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAgg                                                                                                                                                                                                                               <  2:362866/281‑1 (MQ=255)
                                             tGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCCTATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAgg                                                                                                                                                                                                                               >  1:1004724/1‑289 (MQ=255)
                                             tGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAgg                                                                                                                                                                                                                               <  1:539699/289‑1 (MQ=255)
                                               ttCGGGAGTATCGAACAACGGGGTCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGa                                                                                                                                                                                                                             <  2:138313/289‑1 (MQ=255)
                                               ttCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAggga                                                                                                                                                                                                                              <  1:719893/288‑2 (MQ=255)
                                               ttCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGa                                                                                                                                                                                                                             <  2:623203/289‑1 (MQ=255)
                                               ttCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGa                                                                                                                                                                                                                             <  2:1483448/289‑1 (MQ=255)
                                                tCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGa                                                                                                                                                                                                                             <  1:945036/288‑1 (MQ=255)
                                                tCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGa                                                                                                                                                                                                                             <  1:994673/288‑1 (MQ=255)
                                                tCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGa                                                                                                                                                                                                                             <  1:892500/288‑1 (MQ=255)
                                                          cGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTtaataa                                                                                                                                                                                                                  <  2:1305411/289‑1 (MQ=255)
                                                            aCCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGa                                                                                                                                                                                                                             <  2:1185001/276‑1 (MQ=255)
                                                               aTCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTTCTGCCTTCCACCGGACTGATCACGTGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGt                                                                                                                                                                                                             <  1:791420/289‑1 (MQ=255)
                                                                  gggATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCa                                                                                                                                                                                                          <  1:1338745/289‑1 (MQ=255)
                                                                      tcagtgggattggggcgaCAGTATCCAGGACTTGTTTAGTCCGCGCTTTACTGACTCCCGCCGGACGGAGCACGGGTTGGCTGGCATAGGGCGATACCGCCTGTAGCTGCTGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCgt                                                                                                                                                                                                      <  2:1903119/275‑1 (MQ=255)
                                                                      tCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCgt                                                                                                                                                                                                      <  1:1052795/289‑1 (MQ=255)
                                                                      tCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCgt                                                                                                                                                                                                      <  2:703175/289‑1 (MQ=255)
                                                                      tCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCgt                                                                                                                                                                                                      <  1:1404465/289‑1 (MQ=255)
                                                                      tCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCg                                                                                                                                                                                                       <  1:1201/288‑1 (MQ=255)
                                                                      tCAGTAGAGTGTGCGCGCCAATATCCGTGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCGATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCgt                                                                                                                                                                                                      <  1:174609/289‑1 (MQ=255)
                                                                      gcAGTAGAGGTTGCGCGCCAATATCCAGGACTTGTTGAATCAGCGGTTTACTGACTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCg                                                                                                                                                                                                       <  1:43306/287‑1 (MQ=255)
                                                                       gcgTAGGGTTTGCGCGCCAATTTCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCgtg                                                                                                                                                                                                     <  2:1719412/287‑1 (MQ=255)
                                                                          tAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCa                                                                                                                                                                                                          <  1:480663/281‑1 (MQ=255)
                                                                              gTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCtt                                                                                                                                                                                               <  1:1571758/288‑1 (MQ=255)
                                                                               tttcgccgcCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGGTCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTa                                                                                                                                                                                              <  2:10678/282‑1 (MQ=255)
                                                                               tttGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTa                                                                                                                                                                                              <  2:1002237/288‑1 (MQ=255)
                                                                                ttGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAAc                                                                                                                                                                                            <  1:41091/289‑1 (MQ=255)
                                                                                 tGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTcc                                                                                                                                                                                                 >  1:208986/1‑283 (MQ=255)
                                                                                 tGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTaa                                                                                                                                                                                             >  2:1120477/1‑287 (MQ=255)
                                                                                  gcgcgcCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAAAGCGTTCATCGTGTTCCTTAAcca                                                                                                                                                                                          >  1:1257303/1‑288 (MQ=255)
                                                                                          attgccAGGACTGGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAAGTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCTCTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAatg                                                                                                                                                                                  <  2:1041667/285‑1 (MQ=255)
                                                                                          atgtCCAGGACTTGTTTAATCACCGTGTTACGGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAatg                                                                                                                                                                                  <  1:684226/286‑1 (MQ=255)
                                                                                               cagagctttgttAATCCGCGGTGTACTGCCGTCCACCGGACGGGTCACGGGTTTGCTGGCATAGGGAGCTTCCGCCTTTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATTGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGAtgtg                                                                                                                                                                             <  2:875988/279‑1 (MQ=255)
                                                                                               cAGGGCTTGTTTGATTAGCGGGTTACTGCCTGCCACCTGACGGATCACGGGTTGGCGGGCATAGGGCGGTACCGCCTGTAGCTGATGATAAAGCGCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGTCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATGTGCACTTCGCGCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATTCGTGCAGCGTGTTCCGTAGCCTATTTAATGCtgtg                                                                                                                                                                             <  2:426147/289‑1 (MQ=255)
                                                                                                  gACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACCGGTTGGCTGGCATAGGGCGCTACGGCCTGTATCCCATGATAACGATCCTGGAGGGTGTTTGGCGCGTTCTCCCCGTCAGTCAGCAACCAGTCATTACCAGTAGTGGCGTCAATTTTTCCCATTGCGGCTGCCGTTGATCTTAACC‑ACACACCAATTAGCACTTCGCCCTTCCTTAAACGTTCTTTAAAGGTATTTCTCAATAATGCGTTCATCGTGTTCCTTACCCTATTTacatattttcc                                                                                                                                                                           >  2:557519/1‑278 (MQ=255)
                                                                                                       ggttAATCAGCGGTTTCCGGCGTTCCACCGGACGGATCACGGGTTGGTTGGCAAAGGGCGCTACCGCCCGTAGCTGATAGTAAAGATCCTGAATGGTGTTTGGCGCGAGCTCCCCGACAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCATGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCTTTCATCGTGTTCCTTAACCTATTTAAGGATGTGCCACGTCg                                                                                                                                                                     <  2:1828444/287‑1 (MQ=255)
                                                                                                       gTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCg                                                                                                                                                                     >  1:931708/1‑289 (MQ=255)
                                                                                                       gTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCg                                                                                                                                                                     <  1:604651/289‑1 (MQ=255)
                                                                                                        tttAATCAGCGGTTTACTGCCGTCCGCCGGACGGAGCACGGGTTGGCTGGCATAGGGCGCCACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCg                                                                                                                                                                     <  2:209940/288‑1 (MQ=255)
                                                                                                        tttAATCAGCGGTTTACGGTCTTCCAACGGGCGTATCACGGGTTGGCTGGCATAGGGCGCTGCCGCCTGTAGCTGCTGATAAAGTTCCTGGATGGTGTTTGGCGCGTGCTCCCCGTCAATCTGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCg                                                                                                                                                                     <  2:1425870/288‑1 (MQ=255)
                                                                                                         ttAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGt                                                                                                                                                                   <  1:363642/289‑1 (MQ=255)
                                                                                                            ctCAGCGGTTTACTGCCTTCCACCGGACGGGTGACGGGGTGGCTGGCATAGGGCGCTACCGCCTTGAGCTGATGAGAAAGATCCTGAATTGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTg                                                                                                                                                                <  2:462875/288‑1 (MQ=255)
                                                                                                                 cGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATTTGCCACGTCGGTCGTCGCaa                                                                                                                                                           >  2:1777065/1‑289 (MQ=255)
                                                                                                                       aCTGCCTTCCACCGGACGGGTCACGGGTTGCCTGGCATAGGGCGCTACCGCCGGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGc                                                                                                                                                     <  2:1369126/289‑1 (MQ=255)
                                                                                                                            cTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGAtt                                                                                                                                                 <  1:1475167/288‑1 (MQ=255)
                                                                                                                                 aCCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACg                                                                                                                                           <  2:1725206/289‑1 (MQ=255)
                                                                                                                                       cggaTCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAACGGGATTGCTTAATAATGCGTTCATCgtg                                                                                                                                                                                                     >  2:824682/1‑225 (MQ=255)
                                                                                                                                          aTCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGaa                                                                                                                                  >  1:461833/1‑289 (MQ=255)
                                                                                                                                                    ggctggcATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTTCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCg                                                                                                                                                                     >  2:790168/1‑244 (MQ=255)
                                                                                                                                                    ggctggcATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGAtgtg                                                                                                                                                                             >  2:273390/1‑236 (MQ=255)
                                                                                                                                                    ggctggcATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAgc                                                                                                                        >  2:1528494/1‑288 (MQ=255)
                                                                                                                                                    ggctggcATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAgc                                                                                                                        >  2:321988/1‑288 (MQ=255)
                                                                                                                                                               ggCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGa                                                                                                              >  2:115044/1‑288 (MQ=255)
                                                                                                                                                                    tACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTcc                                                                                                                                                                                                 >  1:294278/1‑200 (MQ=255)
                                                                                                                                                                         ccTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCAcc                                                                                                      >  1:1697419/1‑286 (MQ=255)
                                                                                                                                                                                             tCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGGCAGTAATCccg                                                                                >  1:1318422/1‑288 (MQ=255)
                                                                                                                                                                                                  aaTGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAAc                                                                                                                                                                                            >  1:1712683/1‑175 (MQ=255)
                                                                                                                                                                                                         tttGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACa                                                                                                                                                         <  2:421247/203‑1 (MQ=255)
                                                                                                                                                                                                           tGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCaa                                                                 >  1:655539/1‑289 (MQ=255)
                                                                                                                                                                                                            ggCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCaaa                                                                >  1:1558681/1‑289 (MQ=255)
                                                                                                                                                                                                             ccgcggtcaccccGTCAATCAGCAACCAGTCATAACCAGAAGTGGCTGCAATTCCTGCCATATAGGCAGTCGTTTAGCTTACCC‑ACAGACCAATTTGCACTTCGCCCTTTCGTAAACTTTCTTTAAAGGGATTGCTTAATAATGCTTTCATCGTATTCCTTTACCTATTTAATGATGTGCCCAGTCGGTCTGCGCAACAGTCCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCaaa                                                                <  2:1091397/279‑1 (MQ=255)
                                                                                                                                                                                                              cgcgTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCaga                                                                                                                                       <  2:1931330/216‑1 (MQ=255)
                                                                                                                                                                                                              cgcgTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCaga                                                                                                                                       >  1:1931330/1‑216 (MQ=255)
                                                                                                                                                                                                                 gTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTg                                                                     <  1:183329/279‑1 (MQ=255)
                                                                                                                                                                                                                   gCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCCGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGtt                                                         >  1:738295/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCt                                                                                                                                                                                                                                                    >  1:1614475/1‑86 (MQ=255)
                                                                                                                                                                                                                                   cAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCt                                                                                                                                                                                                                                                    <  2:1614475/86‑1 (MQ=255)
                                                                                                                                                                                                                                    aaCCAGTCGTAACCAGAAGTGGCGGCAATTTCTACCATATAGGCAGTCGTCGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGGGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACgcgc                                          <  2:1873115/287‑1 (MQ=255)
                                                                                                                                                                                                                                           cATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCgg                                  <  2:872558/288‑1 (MQ=255)
                                                                                                                                                                                                                                             tAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGc                               >  1:1172623/1‑289 (MQ=255)
                                                                                                                                                                                                                                               cccAGAAGGGGCGGCAATTTCTGCAATATAGGCACTCGTTGAGCTTAACC‑ACAGACCAATTTCCACTTCGCCCTTGCTTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAAGGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGCaa                             <  2:683998/288‑1 (MQ=255)
                                                                                                                                                                                                                                               aCCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGCaa                             <  2:551444/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    aaGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGcc                                                                                                >  1:622072/1‑217 (MQ=255)
                                                                                                                                                                                                                                                    aaGTGGCGGCAATTTCTGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAAAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCAAGCGTCAGTAATCCCCCCGCATCGCTGGCAAATAACGTTTCTGCTTTCATGCGTAGGAACGGGGCAATaaa                         >  1:828477/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     agcggcggcAATTTCTGCCATATAGGCAGTCGTTTGGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCAACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGCAATAAAc                        <  2:92768/285‑1 (MQ=255)
                                                                                                                                                                                                                                                          cggcAATTTCGGCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGCAATAAACCCGcc                   <  1:1890647/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            gcaattgtggCCAGATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACTTTCTTTAAAGGGATGGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGCAATAAACCCGCCCa                 <  2:1697419/279‑1 (MQ=255)
                                                                                                                                                                                                                                                                tttCTGCCATATAGGCAGTCGTTAAGCTTAACC‑ACAGACCAATTTGCACTTCGTCCTGTGTTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGGTCGGGGCAATAAACCCGCCCACTGCa            <  2:477314/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tgcttataGGCAGTCGTAGAGCTTAAAC‑AAAGACCCATTGTCACTTTGCCCTTGCTTAAACGTTTTTTAAAGGGATTGCTTAATACTGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGCAATAAACCCGCCCACTGCACCaaa       <  2:1236529/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gCCATATAGGCAGTCGTTGAGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGCGAACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGCAATAAACCCGCCCACTGCACCaaa       <  2:1576442/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gCCACACAGGCAGTCGGTCAGCTTAACCGACA‑CCCAATATTCACTTCGCCCTTGCGTAAACGTTTTTATAAGTGGTTGTTTAATCATGCGTTCACCGATTTCCGTTACCTAGTTAATGATGTGCCACGTCGGTCTGCTCAACAGTGCGATTTACCCGCAGAGTGAAAAAAATCATCGAACCGATGACCGCCACAGCTGCCAGCGTCAGTAATACCGCCGCATCGCTGGCAAAGAACGTTTCTGCTTTCACGCGCAGGATCGGGGCAATAAACCCGCCCACTGCAACaaa       <  2:1442397/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                   
TCACCGTAGGGAGGATAGCGCGTGGCAGACACCACCTGACGTGCCTGTTCGGCAGTATCGACCATCGGGATCAGTAGAGTTTGCGCGCCAATATCCAGGACTTGTTTAATCAGCGGTTTACTGCCTTCCACCGGACGGATCACGGGTTGGCTGGCATAGGGCGCTACCGCCTGTAGCTGATGATAAAGATCCTGAATGGTGTTTGGCGCGTGCTCCCCGTCAATCAGCAACCAGTCATAACCAGAAGTGGCGGCAATTTCTGCCATATAGGCAGTCGTACTGCTTAACC‑ACAGACCAATTTGCACTTCGCCCTTGCGTAAACGTTCTTTAAAGGGATTGCTTAATAATGCGTTCATCGTGTTCCTTAACCTATTTAATGATGTGCCACGTCGGTCTGCGCAACAGTGCGATTTACACGCAGAGTGAAAATAATCAGGCTACCGATGACCGCCACCGCTGCCAGCGTCAGTAATCCCGCCGCATCGCTGGCAAATAACGTTTCTGCTTTCACGCGCAGGATCGGGGCAATAAACCCGCCCACTGCACCAAACAGGT  >  CP042583/1929749‑1930303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A