Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,936,676 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,936,6760AT99.0% 448.7 / NA 190intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (88/100);  minor base G (0/2);  total (88/102)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,936,6770CG99.5% 444.4 / NA 190intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (88/101);  minor base A (0/1);  total (88/102)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,936,6780TA99.5% 449.7 / NA 190intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (88/101);  minor base G (0/1);  total (88/102)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 190 total aligned reads displayed.

GCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCACTAAAC‑CAGGTAGCGCTCTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCACTCAAGCATTGATTGGTACTACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTACTCTTCAAGCTAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAATTCGCAGT  >  CP042583/1936397‑1936956
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
gCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTc                                                                                                                                                                                                                                                                                  >  2:96050/1‑288 (MQ=255)
gCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTc                                                                                                                                                                                                                                                                                  >  2:1015720/1‑288 (MQ=255)
gCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTc                                                                                                                                                                                                                                                                                  >  2:383988/1‑288 (MQ=255)
 cAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCg                                                                                                                                                                                                                                                                                 <  2:151294/288‑1 (MQ=255)
 cAATGATTATGGGTGAAAATAACGATATTGTTATCAGCCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCg                                                                                                                                                                                                                                                                                 <  1:972073/288‑1 (MQ=255)
          tGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCa                                                                                                                                                                                                                                                                        >  2:341879/1‑288 (MQ=255)
          tGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTAAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCa                                                                                                                                                                                                                                                                        >  2:316340/1‑288 (MQ=255)
               gAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGa                                                                                                                                                                                                                                                                  <  1:456944/289‑1 (MQ=255)
                           atTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTAGCAACGTTCAGCATGACGAAACAAAACg                                                                                                                                                                                                                                                      >  2:1676990/1‑289 (MQ=255)
                               ttATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACaa                                                                                                                                                                                                                                                  <  1:1160484/289‑1 (MQ=255)
                                      gcgcTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGt                                                                                                                                                                                                                                            >  1:1923585/1‑288 (MQ=255)
                                       cgcTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCggg                                                                                                                                                                                                                                             <  1:379973/286‑1 (MQ=255)
                                       cgcTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCggg                                                                                                                                                                                                                                             <  1:645558/286‑1 (MQ=255)
                                          tttgctttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGtgctg                                                                                                                                                                                                                                        <  1:1079251/288‑1 (MQ=255)
                                          tttgctttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGtgctg                                                                                                                                                                                                                                        <  1:447974/288‑1 (MQ=255)
                                          tttgctttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGtgctg                                                                                                                                                                                                                                        <  1:992341/288‑1 (MQ=255)
                                               tttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCtgtg                                                                                                                                                                                                                                   <  1:1918987/288‑1 (MQ=255)
                                               tttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCtgtg                                                                                                                                                                                                                                   <  2:1310369/288‑1 (MQ=255)
                                               tttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCtgtg                                                                                                                                                                                                                                   <  2:877029/288‑1 (MQ=255)
                                                ttgTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGcc                                                                                                                                                                                                                                 >  1:530371/1‑289 (MQ=255)
                                                        ccTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAACCGACAACCGGGTGCCGCTGTGCCAGTCCgg                                                                                                                                                                                                                          >  2:1112602/1‑288 (MQ=255)
                                                        ccTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTgg                                                                                                                                                                                                                          >  1:605204/1‑288 (MQ=255)
                                                        ccTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTgg                                                                                                                                                                                                                          >  2:725037/1‑288 (MQ=255)
                                                        ccTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTgg                                                                                                                                                                                                                          >  1:1564589/1‑288 (MQ=255)
                                                        ccTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGc                                                                                                                                                                                                                         <  1:267951/289‑1 (MQ=255)
                                                        ccTTAATTGCACTATAAATCTCATTACCGCACTAAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGc                                                                                                                                                                                                                         <  1:316340/289‑1 (MQ=255)
                                                         cTTAATTGCACTATAAATCTCAGTACAGCACGGAAGAAGGCGTTTATCTACCGTCAATGTTTTAACCGCTGAAAGC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCATGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGc                                                                                                                                                                                                                         <  1:944769/288‑1 (MQ=255)
                                                                 cACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCGGACAAGCATTGATTGGTTGAACGGTCTCAACGTTCAGCATGACGAAACAACACGACAACCGGGTGCTGCTGTGCCATTTTGGCCAGTGtttt                                                                                                                                                                                                                >  2:1081581/1‑289 (MQ=255)
                                                                   cTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTAt                                                                                                                                                                                                              >  1:273156/1‑289 (MQ=255)
                                                                      taAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTg                                                                                                                                                                                                            >  2:773863/1‑288 (MQ=255)
                                                                              aTTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAAAGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGt                                                                                                                                                                                                   >  1:1493318/1‑289 (MQ=255)
                                                                                   cGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCaa                                                                                                                                                                                              <  1:1042909/289‑1 (MQ=255)
                                                                                     cccTGATGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAAc                                                                                                                                                                                            <  1:772397/287‑1 (MQ=255)
                                                                                      aCTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAAcc                                                                                                                                                                                           <  2:1849373/289‑1 (MQ=255)
                                                                                        tGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAACCCAt                                                                                                                                                                                         >  1:1672082/1‑289 (MQ=255)
                                                                                        tGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATGGTCGATACGTGGCAAACCAt                                                                                                                                                                                         >  1:582133/1‑289 (MQ=255)
                                                                                          aagaagTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCAtt                                                                                                                                                                                        >  2:688233/1‑288 (MQ=255)
                                                                                           agaagTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGc                                                                                                                                                                                      <  2:555327/289‑1 (MQ=255)
                                                                                               gTCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTAc                                                                                                                                                                                   >  1:1742975/1‑288 (MQ=255)
                                                                                                tCGTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACt                                                                                                                                                                                  >  1:1534952/1‑288 (MQ=255)
                                                                                                  gTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCa                                                                                                                                                                               <  2:370151/289‑1 (MQ=255)
                                                                                                  gTTTATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCa                                                                                                                                                                               <  2:605204/289‑1 (MQ=255)
                                                                                                    ttATCTACCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAg                                                                                                                                                                              >  1:1449989/1‑288 (MQ=255)
                                                                                                       atcacggTCCATGTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATCTCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTTGGTACCTTTAACCGTAATACCTGTTTGATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAggcgg                                                                                                                                                                          <  2:47381/283‑1 (MQ=255)
                                                                                                          aCCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCAt                                                                                                                                                                       <  2:1548317/289‑1 (MQ=255)
                                                                                                          aCCGTCAATTTTTTACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCAt                                                                                                                                                                       >  1:1459599/1‑289 (MQ=255)
                                                                                                                 aTTTTTTACCCG‑ATGAAACACAGGTAGCCGACTGAATGGTCCGGACGGTATTAATGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTAcc                                                                                                                                                                <  2:24396/289‑1 (MQ=255)
                                                                                                                       tACCCGCTGAAAAC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTcc                                                                                                                                                          <  2:830202/289‑1 (MQ=255)
                                                                                                                             ctgaaaaC‑CAGGTAGCCGACTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCa                                                                                                                                                                                                                       <  1:365148/218‑1 (MQ=255)
                                                                                                                                           agccgaggggaTGGTCCGGACGGTATTACTGAAATAAGGATCGAAATCATGGATATCAGCACTAAAAGCGTTACCCAGTTCACGGGCAGCCTGGGTACCTTTAACCGTAATACCTGTTTGATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAGCAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATGGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAgcgc                                                                                                                                        <  2:1864335/278‑1 (MQ=255)
                                                                                                                                           agccgactGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAgcgc                                                                                                                                        <  2:1578093/282‑1 (MQ=255)
                                                                                                                                             ccgactGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAATCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTGTTATTGTCGATACGTGGCAAACCATTGCAACTCCAGGCGGCATGAGTAACCAGCCCGGCAATTGCAACGCGCGCCaa                                                                                                                                     >  2:1382668/5‑288 (MQ=255)
                                                                                                                                              cgactGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCa                                                                                                                                      <  1:96050/284‑1 (MQ=255)
                                                                                                                                                  tGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTaaaa                                                                                                                                >  1:1873027/1‑289 (MQ=255)
                                                                                                                                                           cGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAatga                                                                                                                             <  1:1846856/283‑1 (MQ=255)
                                                                                                                                                              aCGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCagcgag                                                                                                                                           >  2:636794/1‑266 (MQ=255)
                                                                                                                                                                  tATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGa                                                                                                                                                                     >  1:1610458/1‑236 (MQ=255)
                                                                                                                                                                  tATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGa                                                                                                                                                                     <  2:1610458/236‑1 (MQ=255)
                                                                                                                                                                  tATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACAGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGCTATAtttttt                                                                                                                >  2:595675/1‑289 (MQ=255)
                                                                                                                                                                   aTTACTGGAATAAAGATCGAATTCAGGGAAATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATAttttttt                                                                                                               <  2:1053204/289‑2 (MQ=255)
                                                                                                                                                                          gAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATAtttttttgacttca                                                                                                        >  1:1286257/1‑281 (MQ=255)
                                                                                                                                                                            aTAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAAc                                                                                                                                                                                            >  2:1908218/1‑203 (MQ=255)
                                                                                                                                                                            aTAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCaac                                                                                                      >  1:1345382/1‑288 (MQ=255)
                                                                                                                                                                            aTAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCaac                                                                                                      >  2:1816946/1‑288 (MQ=255)
                                                                                                                                                                            aTAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCaac                                                                                                      >  1:781051/1‑288 (MQ=255)
                                                                                                                                                                            aTAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCaa                                                                                                       >  2:1826171/1‑288 (MQ=255)
                                                                                                                                                                            aTAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGAGGATATATTTTTTTGACTTCaac                                                                                                      >  1:1806535/1‑288 (MQ=255)
                                                                                                                                                                               aaGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCAt                                                                                                                                                                       <  1:1776752/221‑1 (MQ=255)
                                                                                                                                                                                    cGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCg                                                                                              >  2:1452783/1‑289 (MQ=255)
                                                                                                                                                                                    cGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCg                                                                                              >  2:1332354/1‑289 (MQ=255)
                                                                                                                                                                                                         tAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAAc                                                                         <  2:1345382/289‑1 (MQ=255)
                                                                                                                                                                                                          aaagGCGTTGCCCAGTTCCCCGGCATCCTGGGTCCCTTTAACCGTCATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACt                                                                        <  2:1672082/289‑1 (MQ=255)
                                                                                                                                                                                                           aaaGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGTTGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTc                                                                       <  2:1474953/289‑1 (MQ=255)
                                                                                                                                                                                                            aaGCGTGGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTcc                                                                      <  1:235933/289‑1 (MQ=255)
                                                                                                                                                                                                             cgCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACAGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTc                                                                       <  1:125117/286‑1 (MQ=255)
                                                                                                                                                                                                                 ttGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTc                                                                       >  1:65846/1‑283 (MQ=255)
                                                                                                                                                                                                                   gCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCtgtg                                                                                                                                                                                                                                   <  1:864854/125‑1 (MQ=255)
                                                                                                                                                                                                                      cAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGAc                                                            <  1:1676990/289‑1 (MQ=255)
                                                                                                                                                                                                                                ggaTCGTGGGTACACTTAACGGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGGAACGTTAAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCGGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAAc                                                   <  2:966988/286‑1 (MQ=255)
                                                                                                                                                                                                                                gagttcttggcatcTTTAACCTGACTACCTGGTTTTTCTTGCAAGGATTGATTGGTGGGACGGTAGCAACGTTCGGCAGTACGAAACAAAACGACAAGCTGGTGCTGCGGTGCCAGTCTGGCCAGTGTTTTATTGTGGATACGTGGCAAACAATTGCTACTCCAGGCGGAATGAGTACCCAGTCCTGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAAc                                                   <  2:1944610/275‑1 (MQ=255)
                                                                                                                                                                                                                                gCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAAc                                                   <  1:725037/288‑1 (MQ=255)
                                                                                                                                                                                                                                   tCCTGGGTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAg                                                >  1:1622557/1‑288 (MQ=255)
                                                                                                                                                                                                                                       gggTACCTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAAt                                           <  2:1742975/289‑1 (MQ=255)
                                                                                                                                                                                                                                            ccTTTAACCGTAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCg                                      <  1:147872/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      tAATACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGa                             >  2:1251376/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       aaTACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACTTAAACTCCACCTATAGACAAGCGCAACCAAAAAATTACCGTGaacagtagc                           >  2:1771903/1‑282 (MQ=255)
                                                                                                                                                                                                                                                        aTACCTGTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATCGACAAGAGCAAACAGACAATTACCGTCAAATTGAGca                          >  2:1483830/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              gTTTTATCTGACAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTc                                                                       <  2:1654458/238‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tatctgacAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTgg                <  1:112712/282‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tatatgaaaaGCATTGATAGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTgg                <  2:1920039/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCg              >  1:70274/1‑284 (MQ=255)
                                                                                                                                                                                                                                                                         cAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAAt         >  1:928366/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         cAAGCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAAt         >  2:529882/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          aaGCATTGATTGGTGAAACGGGCGCAACGTTAAACATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCTGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAAtt        <  2:1166281/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            gCATTGATTGGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAATTc       >  2:1156381/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                              attgattgGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAATTCGc     <  1:1015720/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tgattgGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAATTCGCAGt  <  1:1222322/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tgattgGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAATTCGCAGt  <  1:1078444/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tgattgGTTGAACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAATTCGCAGt  <  1:1030871/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tgattgGTTGAACGGTCGCAACCTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAATTCGCAGt  <  1:1394631/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
GCAATGATTATGGGTGAAAATAACGATATTTTTATCAGGCGCTTTGCTTTGTAAGTCCTTAATTGCACTATAAATCTCATTACCGCACTGAAGAAGTCGTTTATCTACCGTCAATTTTTTACCCGCACTAAAC‑CAGGTAGCGCTCTGAATGGTCCGGACGGTATTACTGGAATAAAGATCGAAATCAGGGATATCAGCACTAAAAGCGTTGCCCAGTTCACGGGCATCCTGGGTACCTTTAACCGTAATACCTGTTTTATCACTCAAGCATTGATTGGTACTACGGTCGCAACGTTCAGCATGACGAAACAAAACGACAACCGGGTGCTGCTGTGCCAGTCTGGCCAGTGTTTTATTGTCGATACGTGGCAAACCATTGCTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTACTCTTCAAGCTAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATTGAGCTACATTTCTGGCGATAATTCGCAGT  >  CP042583/1936397‑1936956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A