Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
614,149 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 614,149 | 0 | A | T | 98.6%
| 490.8
/ NA
| 211 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (97/110); minor base G (2/1); total (99/112) |
| Fisher's exact test for biased strand distribution p-value = 6.03e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 614,150 | 0 | C | G | 99.5%
| 492.3
/ NA
| 211 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (99/111); minor base T (0/1); total (99/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 614,151 | 0 | T | A | 98.6%
| 477.9
/ NA
| 211 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base A (98/107); total (99/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 211 total aligned reads displayed.
CTGGTGTTACTGAGCATCCCCCAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGACTCATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTGC‑TTGCTGCGCTAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCACTTTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGGCTTATTCCGCCACTCTGGTCATGGTTATCTTCGCTATCGGTCTTATTAAGCTGGTAATCACTGCGTAAGC > CP042583/613871‑614429
|||
gaggtgtttgagAGCATCCCCCAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACt < 1:26649/276‑1 (MQ=255)
aggtgtttgagAGCATCCCCCAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGGGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGAATGATTGAGGGCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCGGGTAAATGACGCGGCCTGATTGACTGAt > 1:1788310/11‑289 (MQ=255)
aggtgtttgagAGCATCCCCCAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGa > 2:1552086/11‑288 (MQ=255)
ttgagAGCATCCCCCAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑Ac < 2:1998908/285‑1 (MQ=255)
cATCCCCCAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCATGGCGGGACTTTTTTCTGGTAAATGACGTGGCAGGATTGACTGATGGTC‑ACCGTGGCa > 2:366310/1‑289 (MQ=255)
tCCCCCAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCAtt > 1:458780/1‑289 (MQ=255)
tCCCCCAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGAATGAACGTC‑ACCGAGGCAtt > 1:1293386/1‑289 (MQ=255)
cccccAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTg < 1:887738/289‑1 (MQ=255)
cccAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAGGGCCAGGCCTGACCCGCGGCCAATTTATAGCGAACCTGTCCATGGCGAGTCAGGAAGGGC‑TGCGATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGt < 2:1055338/289‑1 (MQ=255)
cccAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGt < 1:670579/289‑1 (MQ=255)
cccAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGt < 1:1287664/289‑1 (MQ=255)
cccAGGAAACTCCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGt < 2:771473/289‑1 (MQ=255)
aaaCTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGGAATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCtg < 1:565106/286‑1 (MQ=255)
aCTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCg < 2:1742538/271‑1 (MQ=255)
ttCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGt > 1:1529705/1‑279 (MQ=255)
ttCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAAt > 1:2000827/1‑288 (MQ=255)
ataaGGTTTCGTTTTCAGTGTTGTGTGCGATGGTAGGCCGTGTGTGGCCCGCTGCCAATTTTTAGCGAACCTGTCCCTGGCGAGTCAGTAAGGGCGTCG‑ATGCTGCCGAAACTTGGAAATTGTTCATCCGACCATCTTCTTCCGTCACTTTTACATCCAGCGTGCCCTGAACAGTCTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTtg < 2:472983/287‑1 (MQ=255)
aagtgTTTCCTTTTCGGTTTGATGTGAAATGGAAGGCCGTGGCCGACCCGCGGCCAATTTCTAGCTAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTtgt < 2:1322163/285‑1 (MQ=255)
tttCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTgggg < 1:73040/288‑1 (MQ=255)
tttCATTTTCAGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGc > 2:287036/1‑289 (MQ=255)
tttCATTTTCAGTTTGATGTGACATGGAAGGCCGGCGCTGACCCGCGGCCAAGTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTgggg < 2:1774507/288‑1 (MQ=255)
aGTTTGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCg > 2:1818221/1‑242 (MQ=255)
gTTTGATGGAACATGCACGGCCATGCCTGACCCGCGGCCAATTTATGGGGAGCCTGTCCCTGGCGAGTCAGGAAGGGAGTCG‑ATGCTGCCGACAGCTGAAACTTGTTCACCCGGCCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGCCTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACGTTTTTCTGGTAAATGTCGCGGCCTGATGGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCa < 2:1497506/289‑1 (MQ=255)
tttGATGTGACATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCa > 2:1176427/1‑288 (MQ=255)
cATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACgg < 1:1618391/288‑1 (MQ=255)
cGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGAt < 1:1176427/289‑1 (MQ=255)
cGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGAt < 1:184832/289‑1 (MQ=255)
tGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCtg < 2:646497/231‑1 (MQ=255)
tGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTgggg > 2:1852484/1‑254 (MQ=255)
tGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCa < 2:903327/288‑1 (MQ=255)
cgGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCa > 2:1132229/1‑212 (MQ=255)
cgGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAg > 1:1874009/1‑289 (MQ=255)
ttttaatgcaCCAGTCCCTGTCGAGGCAGGAAGGGCGTCG‑ATGTTGCCGAAACCTGGAAATGGTTTACCCGACCATCTTCTTCCGTCCACTTGACATCCAGCGAGCCCTGAACAGAGTGAGTGAGGTCATCAATAAAAAACGGGCCTGGCGGGACTTTTCTGTGTTAAATGACGCGGCCTGGTTGACTGATCGTG‑ACCGGGGCATTGGTCTGT‑GCAATACCGATAATTTGTGGCGCGTAGCCACGCAGCTCCAACGGTAACATTCGATCGTCACTCGCCAGTGCCgcgc < 2:850818/280‑1 (MQ=255)
ttagagggtgccTGTGCCTGCGGGGGCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTGACTTTGACATCCGGCGTGCCCTGAACAGACTGATTGAGGTCATCAAGAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAGATGACGCGGCCTGATTGACTGAGCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCcgcg < 2:1635455/278‑1 (MQ=255)
aCCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTTGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGCTCGTCCCCCGCCAGTGCCCACCCGGTATAAg > 2:1460326/1‑289 (MQ=255)
aCCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGAt < 1:847173/259‑1 (MQ=255)
aCCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGt < 1:344494/284‑1 (MQ=255)
aCCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGt > 2:344494/1‑284 (MQ=255)
aCCTGTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAg > 1:1673140/1‑289 (MQ=255)
gTCCCTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTTGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATCCGGTCGTCCCTCGCCCGGGCCGCGCCGGCATAACaaaa > 2:1426799/1‑289 (MQ=255)
ccTGGCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAAcc > 2:1371243/1‑289 (MQ=255)
ggCGAGTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATACGAAAAACCATc > 1:1115622/1‑289 (MQ=255)
gTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTTGCCTTGGTCTGT‑GCAATACCGCTAATTTGTTGGGCGTAGCCACCCCGCTCCCATGGTAACATTCGGTCCTCCCCCCCCAATCCCCGGCCGGGTTAAACAACACCATCGaaaa > 2:1701047/1‑289 (MQ=255)
gTCAGGAAGGGCGTCG‑ATGCTGCCGAAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGaaaa > 1:560202/1‑289 (MQ=255)
tcgatgctgccgaaaCCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGaa > 2:1585094/14‑289 (MQ=255)
aaCCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGCTCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCg < 2:812275/289‑1 (MQ=255)
aaCCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCg < 1:1412036/289‑1 (MQ=255)
ttGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACt < 2:805261/289‑1 (MQ=255)
aCCCGACCCTCTTCTTCCGGCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGGC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATGTGTGGTGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGc < 2:1281000/289‑1 (MQ=255)
aCCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGc < 1:1585094/289‑1 (MQ=255)
ccGACCATCTTCTTCCGTCACTTTTACATCCAGCGTGCCCTTAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTgggg < 2:1528144/167‑1 (MQ=255)
aCCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAAt > 1:1275985/1‑289 (MQ=255)
aCCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAAt > 1:494319/1‑289 (MQ=255)
ccAGCTTCTTCCTGAACTTGTACATCCGGCGGGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAAt < 2:330098/288‑1 (MQ=255)
ccGTCACATTGACATCCGGCGTGGCCGGAAAAGACTGGTTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATgg < 2:458129/289‑1 (MQ=255)
cGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGa < 1:424694/289‑1 (MQ=255)
tCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACg < 2:402203/289‑1 (MQ=255)
tCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCCCCGAGTGTTAACTTAGAGCCTAATTGCGGTAAAGGACg > 2:1732230/1‑289 (MQ=255)
cACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACTGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACg < 1:910025/288‑1 (MQ=255)
tCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAgg > 1:285515/1‑289 (MQ=255)
ccAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGt < 2:494319/289‑1 (MQ=255)
aGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCg < 1:1833250/100‑1 (MQ=255)
aGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCCGTGCCGCGCCGGTATAAGAAAAACCCTCGAAAATATCGGACCTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATAGACGAAACAGATAGGTGc > 2:72061/1‑289 (MQ=255)
cGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGAAAGGttgga > 2:436233/1‑285 (MQ=255)
gTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCgc < 1:1371243/288‑2 (MQ=255)
cccTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGt < 1:1150538/281‑1 (MQ=255)
ccTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCgcgata < 1:1021572/288‑6 (MQ=255)
aaCAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCgc < 2:832213/280‑2 (MQ=255)
aCAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAATTCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCg < 1:1426799/288‑1 (MQ=255)
aCTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGa < 2:466299/225‑1 (MQ=255)
aCTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCgcgata < 1:1512100/279‑6 (MQ=255)
aCTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGcctg > 1:1899834/1‑286 (MQ=255)
aCTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGCGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCg > 2:1932319/1‑224 (MQ=255)
aCTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTAGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGcctg > 1:995046/1‑286 (MQ=255)
cTGATTGAGGTCATCACTATACACCGGGCATGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTG‑TTGTCTACCGTGGCATTGGTCTGG‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCTATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGcctga < 2:265294/288‑4 (MQ=255)
cTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGcctga < 1:1601861/288‑4 (MQ=255)
ttGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGt < 2:1608869/212‑1 (MQ=255)
ttGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGcctgactgg > 1:277961/1‑281 (MQ=255)
tcaATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCgcgc < 2:789972/160‑1 (MQ=255)
tcaATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCgcgc > 1:789972/1‑160 (MQ=255)
tcaATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTa > 1:1936024/1‑288 (MQ=255)
tcaATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTAt > 1:308236/1‑289 (MQ=255)
ataataAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCtt < 1:1939166/289‑1 (MQ=255)
aataaACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCg < 1:827396/289‑1 (MQ=255)
aaCGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGGTTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTAt < 1:122169/289‑1 (MQ=255)
aaCGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGcc > 2:1841054/1‑200 (MQ=255)
aaCGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTAt < 1:975144/289‑1 (MQ=255)
aaCGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTAt < 1:362007/289‑1 (MQ=255)
gCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGCGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTATCgg > 1:816140/1‑287 (MQ=255)
gCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCTTAATTGCGGTAATGGACGAAAAAGATAGGGGCGCGATATTCCGCCTGGCTGGTCATGGTTATCCTCGCTATCgg > 2:122169/1‑287 (MQ=255)
gCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCgcgata > 2:56351/1‑246 (MQ=255)
gCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAAATGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAACAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTATCgg > 2:1957774/1‑287 (MQ=255)
gCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATCCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTGGAGCCTAATTGCGGGAATGGACGAAAAAGTTAGGTGCGCGGTATTCCGCCTGACTGGTCAGGGTTTTTCTCGCTACCgttt > 2:1207230/1‑286 (MQ=255)
gCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGAACGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTTCGACTGACTGGTCATTGTTATCTTCGCTATCgg > 1:332032/1‑287 (MQ=255)
gCGGGACTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTATCGGTCttatt > 1:1981304/1‑289 (MQ=255)
aCTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTATCGGTCTTATTaa > 1:1955657/1‑286 (MQ=255)
aCTTTTTTCTGGTAAATGACGCGGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTATCGGTCTTATTaa > 1:1468292/1‑286 (MQ=255)
gTAAATGACGCCGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCCGCCCCCACGGTAACATTCGATCGTCACCCGCCAGGGCCGCGCCGGTATAAGAAAAAACATCGCAAATATTGGAACTGAAATCGCTTTGGCCGAGGGTTAACTTAGAGCCTACTTGCGGTAATGGACGGAAAAGATAGGTGCGGGATCTTCCTCCTGACAGGTCAGTGCTATCTTCGTTATCGGTCTTAGTAAGCTGGTAAtacct > 2:215428/1‑284 (MQ=255)
aTGCCGCGGCCCGTTTTATCGATGGTC‑ACCGTGGCATTGG‑CTGTGGCAAGACCCTTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTATCGGTCTTATTAAGCTGGTAATCACTGCGTa < 2:551682/289‑1 (MQ=255)
cgcgGCCTGATTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAACATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGCGATATTCCGCCTGACTGGTCATGGTTATCTTCGCTATCGGTCTTATTAAGCTGGTAATCTACGCGTAAgc > 2:317243/1‑288 (MQ=255)
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CTGGTGTTACTGAGCATCCCCCAGGAAACTTCATTGCTAAAAAAGGTTTCATTTTCAGTTTGATGACTCATGGAAGGCCGTGGCTGACCCGCGGCCAATTTATAGCGAACCTGTCCCTGGCGAGTCAGGAAGGGCGTGC‑TTGCTGCGCTAACCTGGAAATTGTTCACCCGACCATCTTCTTCCGTCACTTTGACATCCAGCGTGCCCTGAACAGACTGATTGAGGTCATCAATAATAAACGGGCCTGGCGGGACTTTTTTCTGGTAAATGACGCGGCCACTTTGACTGATCGTC‑ACCGTGGCATTGGTCTGT‑GCAATACCGCTAATTTGTGGGGCGTAGCCACGCAGCTCCCACGGTAACATTCGATCGTCACTCGCCAGTGCCGCGCCGGTATAAGAAAAACCATCGAAAATATTGGAACTGAAATCGGTTTCGCCGAGGGTTAACTTAGAGCCTAATTGCGGTAATGGACGAAAAAGATAGGTGCGGCTTATTCCGCCACTCTGGTCATGGTTATCTTCGCTATCGGTCTTATTAAGCTGGTAATCACTGCGTAAGC > CP042583/613871‑614429
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
