Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 711,779 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583711,7790AT100.0% 625.4 / NA 261intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (115/146);  total (115/146)
*CP042583711,7800CG100.0% 624.3 / NA 261intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (115/146);  total (115/146)
*CP042583711,7810TA100.0% 621.1 / NA 261intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (115/146);  total (115/146)

Only 100 of 261 total aligned reads displayed.

GGTTTTGCTGTTGATAACTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTACTTTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGATATATAAAGACGGTGTAGAGGAAAAG  >  CP042583/711500‑712055
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                  
ggTTTTGCTGTTGATAACTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAAc                                                                                                                                                                                                                                                                              <  1:173931/288‑1 (MQ=255)
        tGTTGATAACTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAg                                                                                                                                                                                                                                                                      <  1:1026944/288‑1 (MQ=255)
                 cTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCAt                                                                                                                                                                                                                                                            <  1:1001924/289‑1 (MQ=255)
                    gAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGTCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAAt                                                                                                                                                                                                                                                         >  2:1698475/1‑289 (MQ=255)
                          tCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                   >  1:317644/1‑289 (MQ=255)
                          tCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                   >  2:409296/1‑289 (MQ=255)
                           ccccAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                   <  1:1832738/288‑1 (MQ=255)
                           ccccAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                   >  1:1272247/1‑288 (MQ=255)
                            cccAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCatat                                                                                                                                                                                                                                                  >  2:1689926/1‑288 (MQ=255)
                            cccAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCatat                                                                                                                                                                                                                                                  >  2:40088/1‑288 (MQ=255)
                                  gCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCctct                                                                                                                                                                                                                                             <  1:1850691/287‑1 (MQ=255)
                                  gCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCctct                                                                                                                                                                                                                                             <  1:1622218/287‑1 (MQ=255)
                                    tACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTa                                                                                                                                                                                                                                                                 >  1:1703493/1‑265 (MQ=255)
                                    tACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTc                                                                                                                                                                                                                                                              >  1:1428286/1‑268 (MQ=255)
                                    tACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGAt                                                                                                                                                                                                                                         >  1:1972565/1‑289 (MQ=255)
                                      cacCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGt                                                                                                                                                                                                                                       >  1:933565/1‑289 (MQ=255)
                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAg                                                                                                                                                                                                                                                                      >  2:184384/1‑253 (MQ=255)
                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATg                                                                                                                                                                                                                                   >  1:37598/1‑288 (MQ=255)
                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGt                                                                                                                                                                                                                                  >  2:1256258/1‑289 (MQ=255)
                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCATCTTGATGTTATg                                                                                                                                                                                                                                   >  2:1140301/1‑288 (MQ=255)
                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGACCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCCAAGAAAGATCAATAAACTGGATAACCTGGCTATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGATATAAAGCAGATGGGTCGCTTTTGATTTAACTAATTTAGTGGTACTCATAATTTCATATCCTCTTGATgctcgg                                                                                                                                                                                                                                   >  2:1711457/1‑283 (MQ=255)
                                                        cacGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCctc                                                                                                                                                                                                                                              <  1:1220918/264‑1 (MQ=255)
                                                        cacGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAAc                                                                                                                                                                                                                     >  2:304755/1‑289 (MQ=255)
                                                         acGTTCTGCCATGGTATCCAGATGATGGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACg                                                                                                                                                                                                                    <  2:185899/289‑1 (MQ=255)
                                                         acGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACg                                                                                                                                                                                                                    <  2:668710/289‑1 (MQ=255)
                                                         acGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACg                                                                                                                                                                                                                    <  2:931348/289‑1 (MQ=255)
                                                         acGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGGGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGGCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACg                                                                                                                                                                                                                    <  1:1711457/289‑1 (MQ=255)
                                                             tCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACgaga                                                                                                                                                                                                                 <  1:1000068/288‑1 (MQ=255)
                                                              cttccATGGTCTCCAGATGTTCGATCAGGGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGAGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                               <  2:1629232/286‑1 (MQ=255)
                                                              cTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                               <  1:991595/289‑1 (MQ=255)
                                                              cTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                               <  1:742922/289‑1 (MQ=255)
                                                                     ggTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGtata                                                                                                                                                                                                        >  1:898060/1‑289 (MQ=255)
                                                                        aTCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGTATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTTGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTGCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCa                                                                                                                                                                                                     <  1:367545/289‑1 (MQ=255)
                                                                        aTCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCa                                                                                                                                                                                                     <  2:494393/289‑1 (MQ=255)
                                                                              tgggtcgatcGGGGCGGGGGGGAAGCACTCCGGATTTTAAGGTAGGGCAATGAAGTTGGTGCCGCGGATGTTCCAGGGCGCTGGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCt                                                                                                                                                                                               <  2:1541655/285‑1 (MQ=255)
                                                                                gatcgatcAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTAt                                                                                                                                                                                             >  2:1479043/1‑289 (MQ=255)
                                                                                 atcgatcAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATc                                                                                                                                                                                                                                                 <  1:818116/236‑1 (MQ=255)
                                                                                 atcgatcAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTAtg                                                                                                                                                                                            >  1:693650/1‑289 (MQ=255)
                                                                                   cgatcAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTAtgtg                                                                                                                                                                                          <  2:945566/289‑1 (MQ=255)
                                                                                           gcggtgcggAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCg                                                                                                                                                                                     <  1:1689926/286‑1 (MQ=255)
                                                                                           gcggtgaggAAGCCGTCCAGCATTTCATGTACGGCAATGACGTTAGCGCCGGGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCg                                                                                                                                                                                     <  2:898060/286‑1 (MQ=255)
                                                                                              gtgcggAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTAtt                                                                                                                                                                                <  2:1235846/288‑1 (MQ=255)
                                                                                               tgcggAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTAt                                                                                                                                                                                 >  1:1913950/1‑286 (MQ=255)
                                                                                               tgcggAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTAt                                                                                                                                                                                 >  2:1121767/1‑286 (MQ=255)
                                                                                                 cggAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCg                                                                                                                                                                                     >  1:1292056/1‑280 (MQ=255)
                                                                                                 cggAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCg                                                                                                                                                                                     <  2:1292056/280‑1 (MQ=255)
                                                                                                    aaGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                   <  1:1303670/215‑1 (MQ=255)
                                                                                                         aTCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAATCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATa                                                                                                                                                                                                                                                           <  2:1771549/202‑1 (MQ=255)
                                                                                                         aTCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                   <  2:819520/210‑1 (MQ=255)
                                                                                                         aTCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTAtt                                                                                                                                                                                >  1:435190/1‑277 (MQ=255)
                                                                                                         aTCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCt                                                                                                                                                                    >  2:1724438/1‑289 (MQ=255)
                                                                                                           ccAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTGATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTAt                                                                                                                                                                  <  2:1324849/289‑1 (MQ=255)
                                                                                                           ccAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTAt                                                                                                                                                                  <  2:1616959/289‑1 (MQ=255)
                                                                                                                aTTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATTTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATca                                                                                                                                                                <  1:1635507/286‑1 (MQ=255)
                                                                                                                    cATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCa                                                                                                                                                                                                     >  1:1777760/1‑245 (MQ=255)
                                                                                                                    cATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAAt                                                                                                                                                         >  2:966139/1‑289 (MQ=255)
                                                                                                                     ctGTACTGCAATGAAGTTAGTGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATa                                                                                                                                                        <  2:1972565/288‑1 (MQ=255)
                                                                                                                         aCGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTgg                                                                                                                                                    >  2:109072/1‑289 (MQ=255)
                                                                                                                           ggCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTa                                                                                                                                                  >  2:1021179/1‑289 (MQ=255)
                                                                                                                                tGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGtt                                                                                                                                                                                        <  2:181195/246‑1 (MQ=255)
                                                                                                                                       aGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGaaa                                                                                                                                      >  2:586367/1‑289 (MQ=255)
                                                                                                                                            cgcgCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAaaaacaa                                                                                                                                 <  1:577729/289‑1 (MQ=255)
                                                                                                                                                             gcttgcttGGTAATAAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACGAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                 <  2:1674629/288‑1 (MQ=255)
                                                                                                                                                             gcTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTTCTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                 <  2:372209/288‑1 (MQ=255)
                                                                                                                                                             gcTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAaaaac                                                                                                                                   >  1:1387877/1‑270 (MQ=255)
                                                                                                                                                               ttGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAAt                                                                                                               <  1:1109760/288‑1 (MQ=255)
                                                                                                                                                                 gTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAg                                                                                                            <  2:318742/289‑1 (MQ=255)
                                                                                                                                                                  tttGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGt                                                                                                           <  2:1001380/289‑1 (MQ=255)
                                                                                                                                                                  tttGGTAATCAAAGAAAGATAAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGTCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAATCAAAACTAATAAAGATTCAATGAGt                                                                                                           <  1:1202857/289‑1 (MQ=255)
                                                                                                                                                                   ttGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGt                                                                                                           <  1:1567850/288‑1 (MQ=255)
                                                                                                                                                                               taaagaTCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGAt                                                                                              <  2:609633/288‑1 (MQ=255)
                                                                                                                                                                                        attaaCTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGCTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTACGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCATGGAGTTAGATATATTGATAAGAACAAt                                                                                     <  1:822674/286‑1 (MQ=255)
                                                                                                                                                                                        aTAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAAt                                                                                                               <  1:136334/263‑1 (MQ=255)
                                                                                                                                                                                        aTAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAAt                                                                                                               >  2:136334/1‑263 (MQ=255)
                                                                                                                                                                                        aTAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAAt                                                                                     <  1:966139/289‑1 (MQ=255)
                                                                                                                                                                                                gATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTg                                                                                                                                                                                                                                           <  1:790608/131‑1 (MQ=255)
                                                                                                                                                                                                gATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTg                                                                                                                                                                                                                                           >  2:790608/1‑131 (MQ=255)
                                                                                                                                                                                                     ccTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTGTAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGAGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGGTTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTg                                                                        <  1:1041842/289‑1 (MQ=255)
                                                                                                                                                                                                     ccTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                 <  2:1048265/248‑1 (MQ=255)
                                                                                                                                                                                                     ccTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTg                                                                        <  1:113348/289‑1 (MQ=255)
                                                                                                                                                                                                        ggCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                               <  1:291120/151‑1 (MQ=255)
                                                                                                                                                                                                        ggCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                 <  1:1071557/245‑1 (MQ=255)
                                                                                                                                                                                                        ggCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGa                                                                                                             >  2:665846/1‑249 (MQ=255)
                                                                                                                                                                                                          cGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCa                                                                                                                                                                                                                                                             >  1:1803489/1‑103 (MQ=255)
                                                                                                                                                                                                          cGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGa                                                                                                             <  1:148870/247‑1 (MQ=255)
                                                                                                                                                                                                                       ctACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCgg                                                      >  1:269093/1‑289 (MQ=255)
                                                                                                                                                                                                                        tACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTTATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGa                                                     <  1:64020/289‑1 (MQ=255)
                                                                                                                                                                                                                        tACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGa                                                     <  2:269093/289‑1 (MQ=255)
                                                                                                                                                                                                                               gCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                 <  1:404863/222‑1 (MQ=255)
                                                                                                                                                                                                                                cTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAatat                                             >  1:229783/1‑289 (MQ=255)
                                                                                                                                                                                                                                                ggAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATGGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCg                             <  2:229783/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 gagaCATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCg                             <  2:82542/288‑1 (MQ=255)
                                                                                                                                                                                                                                                  agtcATCGTTGCGTGTATAAAACATATTGTTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGa                            <  2:1576001/285‑1 (MQ=255)
                                                                                                                                                                                                                                                        cGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATc                                                                                                                                                                                                                                                 >  2:1069635/1‑69 (MQ=255)
                                                                                                                                                                                                                                                        cGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGATATATaa                     >  1:806024/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           tGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGATATATAAAGa                  <  2:1401508/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            gCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGa                                                              >  2:804582/1‑244 (MQ=255)
                                                                                                                                                                                                                                                                           aTTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTAt                                                                                                                                                                  <  2:72948/129‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aTTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAAt                                                                                     <  2:1915408/206‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aTTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGATATATAAAGACGGTGTAGAGGAAAAg  >  2:1421044/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                  
GGTTTTGCTGTTGATAACTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTACTTTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGATATATAAAGACGGTGTAGAGGAAAAG  >  CP042583/711500‑712055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A