Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F210 I1 R1	4928	340.1	5480506	96.9%	5310610	252.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	711,779	3 bp→TGA	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	711,779	0	A	T	100.0%	960.1 / NA	395	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (179/216); total (179/216)
*	CP042583	711,780	0	C	G	99.8%	951.9 / NA	395	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (179/215); minor base T (0/1); total (179/216)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	711,781	0	T	A	100.0%	946.4 / NA	395	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (179/216); total (179/216)

Only 100 of 395 total aligned reads displayed.

GGTTTTGCTGTTGATAACTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTACTTTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGATATATAAAGACGGTGTAGAGGAAAAGTAGCG  >  CP042583/711500‑712060

|||

        tGTTGATAACTTGAGAGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAg                                                                                                                                                                                                                                                                           <  1:1807487/288‑1 (MQ=255)

            gATAACTTTGTTGGGCCCCCGAGCTCAACCGCCCAGCTGAACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTa                                                                                                                                                                                                                                                                      <  2:1056953/289‑1 (MQ=255)

            gATAACTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTa                                                                                                                                                                                                                                                                      <  1:676837/289‑1 (MQ=255)

               aaCTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTc                                                                                                                                                                                                                                                                   <  1:722464/289‑1 (MQ=255)

                 cTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGAGCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAATCTGCATAACCTGGCGGTTCAGCAACTCTACTGTTGCTGTTTTCTCGCTGTCAGAGCCTTGGGTGCGGGTATAAAGCAGTTTGGTCGCTTTTGACTTGACTGATTTAGGGGAACTAAt                                                                                                                                                                                                                                                                 >  2:299056/1‑289 (MQ=255)

                       tGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTc                                                                                                                                                                                                                                                           >  2:243784/1‑289 (MQ=255)

                           ccccAGAGCTACCCCGCCCTGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGTTCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                        <  1:1042994/288‑1 (MQ=255)

                           ccccAGAGCTACCCCGCCCAGCTGCACTGCACGTTCTGCCATGGTATTCAGATGATCGATAAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                        <  1:1943570/288‑1 (MQ=255)

                           ccccAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                        <  1:1075862/288‑1 (MQ=255)

                           ccccAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                        <  2:1286073/288‑1 (MQ=255)

                                  gCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCtt                                                                                                                                                                                                                                                 <  1:493984/288‑1 (MQ=255)

                                   ctaacccGCCCCGCGGCACTTCACGTTCTGCCATGGTATCCAGATGAGCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTAATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTg                                                                                                                                                                                                                                                <  2:2581270/283‑1 (MQ=255)

                                    tACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGAt                                                                                                                                                                                                                                              >  2:2365807/1‑289 (MQ=255)

                                          gCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATg                                                                                                                                                                                                                                        <  2:1089185/289‑1 (MQ=255)

                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATa                                                                                                                                                                                                                                                                <  1:535034/264‑1 (MQ=255)

                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATg                                                                                                                                                                                                                                        >  1:1980596/1‑288 (MQ=255)

                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATg                                                                                                                                                                                                                                        >  2:2178921/1‑288 (MQ=255)

                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGt                                                                                                                                                                                                                                       >  2:1874129/1‑289 (MQ=255)

                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGt                                                                                                                                                                                                                                       >  2:1647180/1‑289 (MQ=255)

                                           cccAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGt                                                                                                                                                                                                                                       >  2:500755/1‑289 (MQ=255)

                                                   cactgcacGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCAATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATAAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGCCATCGTTGGGCGTATAAAGCAGAGTGGTAGCTTTTGATTTAACTAATTTAGCGGGAATAATAATTTCATATCCTCTTGTTGTTATGTCCCAGTaa                                                                                                                                                                                                                               >  2:1468581/1‑289 (MQ=255)

                                                       gcacGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTaa                                                                                                                                                                                                                           <  2:1756690/289‑1 (MQ=255)

                                                       gcacGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTaa                                                                                                                                                                                                                           <  2:458416/289‑1 (MQ=255)

                                                       gcacGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTaa                                                                                                                                                                                                                           <  2:1147152/289‑1 (MQ=255)

                                                        cacGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAAc                                                                                                                                                                                                                          >  2:1575591/1‑289 (MQ=255)

                                                              cTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                                    <  1:456344/289‑1 (MQ=255)

                                                                gCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                                    <  1:208865/287‑1 (MQ=255)

                                                                    tGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGtat                                                                                                                                                                                                              >  1:1555376/1‑289 (MQ=255)

                                                                    gtgTATCCAGATGATCGATCAGGGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCTGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGtat                                                                                                                                                                                                              <  1:1468581/287‑1 (MQ=255)

                                                                      gTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGtata                                                                                                                                                                                                             >  1:2293374/1‑288 (MQ=255)

                                                                          ccAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCAc                                                                                                                                                                                                         <  1:936295/288‑1 (MQ=255)

                                                                           cAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCg                                                                                                                                                                                                       >  1:2420219/1‑289 (MQ=255)

                                                                              ataaagaacagggtcggtggcgAAGCCATTCAGGATTTCATGGTAGGCAATGAAGTTAAGGCCCCGCATGTTCCCGTGCGCTTGTTTTGGAATTAAAAAAAGGTCAATTAACTGGATAACCTGGCGGTTCAGCAACTCTACTGTTGGTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATTAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCt                                                                                                                                                                                                    <  2:681235/275‑1 (MQ=255)

                                                                                gatcgatcAGGGCGGTGCGGAAGCCATCAAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTAt                                                                                                                                                                                                  <  2:2492686/289‑1 (MQ=255)

                                                                                gatcgagcAGTGCGATGCGGAAGCCATCCAGCATTTCATGTACGGAAAAGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGACCAATAAACTGGATAACCTGGCGATTCAGCAATTCAACAGTTGCTTTTTTCTCGCCGTCGGAGACATCGTTGCGGGTCAAAATCAGTTTGGTAGCTTCTGATTTAACTAATTTAGCGGTAATCATCATGTCCCATCCTCTTGATGTTATGTCCTAGTAAATAATGTGATTAAGTTTATCACCGGcatt                                                                                                                                                                                                  >  2:2531591/1‑286 (MQ=255)

                                                                                 attgatcAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTCGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCgg                                                                                                                                                                                                      <  2:161500/281‑1 (MQ=255)

                                                                                 atcgatcAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTAtg                                                                                                                                                                                                 >  1:2690654/1‑289 (MQ=255)

                                                                                 atcgatcAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTAtg                                                                                                                                                                                                 >  2:1423559/1‑289 (MQ=255)

                                                                                   cgatcAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTAtgtg                                                                                                                                                                                               <  1:1665905/289‑1 (MQ=255)

                                                                                   cgatcAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTAtgtg                                                                                                                                                                                               <  1:1423559/289‑1 (MQ=255)

                                                                                           gcggtgcggAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGTGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCg                                                                                                                                                                                          <  2:1723495/286‑1 (MQ=255)

                                                                                            cggtgcggAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTAt                                                                                                                                                                                      >  2:1193111/1‑289 (MQ=255)

                                                                                               tgcggAAGCCATCCAGCATTTCATGTACGGAAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTaa                                                                                                                                                                                                                           <  2:951668/249‑1 (MQ=255)

                                                                                                 cggAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACgaga                                                                                                                                                                                                                      >  1:2570435/1‑252 (MQ=255)

                                                                                                    aaGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCt                                                                                                                                                                                                    <  1:881517/267‑1 (MQ=255)

                                                                                                    aaGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGACTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTg                                                                                                                                                                                  >  2:1859341/1‑285 (MQ=255)

                                                                                                     aGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGt                                                                                                                                                                             <  1:2228325/289‑1 (MQ=255)

                                                                                                     aGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGt                                                                                                                                                                             <  1:1517276/289‑1 (MQ=255)

                                                                                                         aTCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCt                                                                                                                                                                         >  1:82019/1‑289 (MQ=255)

                                                                                                         aTCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCt                                                                                                                                                                         >  1:2156449/1‑289 (MQ=255)

                                                                                                           ccAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTTGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCGATTCTGGCTGTTCCTAt                                                                                                                                                                       <  1:299056/289‑1 (MQ=255)

                                                                                                           ccAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTAt                                                                                                                                                                       <  2:2293374/289‑1 (MQ=255)

                                                                                                           ccAGCATTTCATGTAAGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTAt                                                                                                                                                                       <  2:1528090/289‑1 (MQ=255)

                                                                                                                aTTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATcaca                                                                                                                                                                   <  1:1193111/288‑1 (MQ=255)

                                                                                                                     aTGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATa                                                                                                                                                             <  1:2496672/289‑1 (MQ=255)

                                                                                                                          cGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGt                                                                                                                                                        >  2:1962499/1‑289 (MQ=255)

                                                                                                                              aaTGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCAc                                                                                                                                                                                                         <  2:1235711/236‑1 (MQ=255)

                                                                                                                               aTGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACaa                                                                                                                                                   <  1:630531/289‑1 (MQ=255)

                                                                                                                                tGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCata                                                                                                                                                                                                                                                        <  2:2415992/187‑1 (MQ=255)

                                                                                                                                tGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATcc                                                                                                                                                                                                                                                     >  2:854121/1‑190 (MQ=255)

                                                                                                                                      tAGCGCCGCGCGTGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTg                                                                                                                                              <  1:1234411/287‑1 (MQ=255)

                                                                                                                                              cgcATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTa                                                                                                                                                                                                                                          >  1:2479813/1‑187 (MQ=255)

                                                                                                                                              cgcATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGt                                                                                                                                                                             >  2:208960/1‑248 (MQ=255)

                                                                                                                                               gcATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAaaaacaaaac                                                                                                                                   >  2:1990907/1‑289 (MQ=255)

                                                                                                                                                         gTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                                    >  1:331314/1‑198 (MQ=255)

                                                                                                                                                         gTGCGCTTGTTTGGTAATCAAAGAAAAATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                                    <  2:331314/198‑1 (MQ=255)

                                                                                                                                                          tGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGAt                                                                                                                         >  2:779163/1‑288 (MQ=255)

                                                                                                                                                             gcTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                      <  2:82019/288‑1 (MQ=255)

                                                                                                                                                             gcTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                      <  1:1739472/288‑1 (MQ=255)

                                                                                                                                                             gcTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                      <  2:566921/288‑1 (MQ=255)

                                                                                                                                                             gcTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                      <  1:1135068/288‑1 (MQ=255)

                                                                                                                                                              cTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCt                                                                                                                                                                                                    <  1:1600104/209‑1 (MQ=255)

                                                                                                                                                                    tGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACt                                                                                                                                                                 >  2:3963/1‑238 (MQ=255)

                                                                                                                                                                    tGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTg                                                                                                                                              >  2:2231296/1‑257 (MQ=255)

                                                                                                                                                                         aTCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTAt                                                                                                                                                                       <  2:2455415/227‑1 (MQ=255)

                                                                                                                                                                          tCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGatata                                                                                                        <  1:1708257/289‑1 (MQ=255)

                                                                                                                                                                           cAAAGAAAGATCAATGAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCa                                                                                                                      <  1:1335267/274‑1 (MQ=255)

                                                                                                                                                                                 aagaTCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGAt                                                                                                   <  1:2365807/287‑1 (MQ=255)

                                                                                                                                                                                   gaTCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTAt                                                                                                                                                                       <  2:1684585/217‑1 (MQ=255)

                                                                                                                                                                                     tCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATAACACTAATAGTGGTAACAAGCGTGAAAAACAAAAATAAAAAAGATTCAATGATTTTGa                                                                                                            >  2:1335267/1‑274 (MQ=255)

                                                                                                                                                                                            aCTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGta                                                                                                                                                                                                               >  1:609141/1‑168 (MQ=255)

                                                                                                                                                                                              tGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGaa                                                                                              <  1:996970/279‑1 (MQ=255)

                                                                                                                                                                                                gATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCAc                                                                                                                                                                                                         <  2:2709170/170‑1 (MQ=255)

                                                                                                                                                                                                              tCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                                    <  2:2635106/145‑1 (MQ=255)

                                                                                                                                                                                                               cAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACg                                                                                                                                                                                                                         >  2:184173/1‑139 (MQ=255)

                                                                                                                                                                                                               cAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACg                                                                                                                                                                                                                         <  1:184173/139‑1 (MQ=255)

                                                                                                                                                                                                               cAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAg                                                                                                <  2:903184/260‑1 (MQ=255)

                                                                                                                                                                                                               cAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAg                                                                                                >  1:903184/1‑260 (MQ=255)

                                                                                                                                                                                                                aGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATca                                                                                                                                                                     <  1:394816/190‑1 (MQ=255)

                                                                                                                                                                                                                               gCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGaataaata                                                   >  1:2624855/1‑289 (MQ=255)

                                                                                                                                                                                                                               gCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGaataaata                                                   <  2:631995/289‑1 (MQ=255)

                                                                                                                                                                                                                                       ctcGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTg                                           >  2:618688/1‑289 (MQ=255)

                                                                                                                                                                                                                                              tCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                                    >  1:2405631/1‑113 (MQ=255)

                                                                                                                                                                                                                                              tCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGAtt                                                                                                                                                                                                                    <  2:2405631/113‑1 (MQ=255)

                                                                                                                                                                                                                                                  agaCATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGa                                 <  1:1267149/288‑1 (MQ=255)

                                                                                                                                                                                                                                                        cGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTAtt                                                                                                                                                                                     <  1:1872610/134‑1 (MQ=255)

                                                                                                                                                                                                                                                        cGTTGCGGGTATAAAGCAGATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGa                                 >  1:590879/1‑282 (MQ=255)

                                                                                                                                                                                                                                                                          gATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATg                                                                                                                   <  2:189491/182‑1 (MQ=255)

                                                                                                                                                                                                                                                                          gATTGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATg                                                                                                                   >  1:189491/1‑182 (MQ=255)

                                                                                                                                                                                                                                                                             tGGTCGCTTTTGATTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTaa                                                                                                                                                               <  1:2441968/135‑1 (MQ=255)

|||

GGTTTTGCTGTTGATAACTTGAGTGGTCCCCAGAGCTACACCGCCCAGCTGCACTGCACGTTCTGCCATGGTATCCAGATGATCGATCAGTGCGGTGCGGAAGCCATCCAGCATTTCATGTACGGCAATGAAGTTAGCGCCGCGCATGTTCCAGTGCGCTTGTTTGGTAATCAAAGAAAGATCAATAAACTGGATAACCTGGCGATTCAGCAACTCTACTGTTGCTTTTTTCTCGCTGTCGGAGACATCGTTGCGGGTATAAAGCAGATTGGTCGCTTTACTTTTAACTAATTTAGCGGTACTCATAATTTCATATCCTCTTGATGTTATGTCCCAGTAATTAACGAGATTAAGTATAGCACCGGCTATGTGTTCCGCTATTCTGGCTGTTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGATATATAAAGACGGTGTAGAGGAAAAGTAGCG  >  CP042583/711500‑712060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A