Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,927,503 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,927,503 | 0 | A | T | 98.5%
| 604.9
/ NA
| 261 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (133/123); minor base C (3/1); total (136/125) |
| Fisher's exact test for biased strand distribution p-value = 6.24e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,927,504 | 0 | G | C | 99.6%
| 617.5
/ NA
| 261 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (135/125); minor base A (1/0); total (136/125) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,927,505 | 0 | T | A | 99.6%
| 620.3
/ NA
| 261 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (135/125); minor base C (1/0); total (136/125) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 261 total aligned reads displayed.
GTATCGCAGCGTGGCGGCTCAGCAAGCACAATATAAAGACCAGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGAGCATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCAGTACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTTGAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGG > CP042583/1927223‑1927779
|||
gTGGCGGCTCAGCAAGCACAATATAAAGACCAGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGc > 1:1210494/1‑287 (MQ=255)
acaATATAAAGACCAGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCg > 2:1542271/1‑289 (MQ=255)
atatAAAGACCAGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTAAACCTGTACATTTGCCCTGCTCGC‑CGAATACCAGGaa > 2:260410/1‑289 (MQ=255)
aGACCAGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTg > 1:299315/1‑289 (MQ=255)
aGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGaa > 1:751871/1‑278 (MQ=255)
aGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGaa < 2:751871/278‑1 (MQ=255)
aGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATg > 2:488963/1‑288 (MQ=255)
ggTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTc < 2:1282933/289‑1 (MQ=255)
gTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTg > 2:536953/1‑279 (MQ=255)
gTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCg > 1:401826/1‑289 (MQ=255)
gTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGAT‑AAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCCAAGCGGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCCCAACCTGTCCATTTCCCCTGCGGGA‑CGAATACCCGGACGTGCTgcagttcga > 2:1028453/1‑281 (MQ=255)
cGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGa < 1:615024/288‑1 (MQ=255)
cGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGa < 2:717405/288‑1 (MQ=255)
ctgctTCGTTAACTACAACCCTCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTgcg < 1:1159866/288‑1 (MQ=255)
ttAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCata > 1:1609149/1‑288 (MQ=255)
tACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCCGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATTGCGACAACCAAGGCTTGCCCGactctaacgaaa > 2:1090910/1‑278 (MQ=255)
aCCAGCAGCAGTTAGGTAAAGATTTAATTAAAGGGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGc < 2:1958901/289‑1 (MQ=255)
tCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGaa > 1:971878/1‑238 (MQ=255)
tCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAAc > 1:1039232/1‑288 (MQ=255)
tCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAAc > 1:232492/1‑288 (MQ=255)
tCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGAGCATATCGAACTGGCAAc > 1:598288/1‑288 (MQ=255)
tAGGGAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCgc‑tggct < 2:1379123/289‑1 (MQ=255)
aaGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACAGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGgcg < 2:1590784/289‑1 (MQ=255)
aTTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTc > 2:793599/1‑233 (MQ=255)
aGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACt < 2:366034/255‑1 (MQ=255)
aGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACt > 1:366034/1‑255 (MQ=255)
aGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGaa > 1:994759/1‑289 (MQ=255)
gTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGc > 2:850307/1‑198 (MQ=255)
gTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCAGTGGGAGTAAAAGGCATTCCGGTGATTGCAACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTTCGCGATCATATAGAACTGGCAACCCgc‑tggct > 1:1728686/1‑253 (MQ=255)
aCCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAAc < 2:384959/235‑1 (MQ=255)
aCCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGa > 1:775329/1‑289 (MQ=255)
ggtctgtACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCg < 1:214349/200‑1 (MQ=255)
ggtctgtACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCCGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCg > 2:214349/5‑204 (MQ=255)
gtgtACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACAAAGGC‑AAAACGTTACCGCTGAAAc > 2:1187226/1‑288 (MQ=255)
tACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAAcc > 1:135381/1‑286 (MQ=255)
aCAACTGCTCAGCAATGAAAAATTCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAAccg‑ct < 1:1467541/288‑1 (MQ=255)
cAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGaa > 1:807120/1‑183 (MQ=255)
cTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAAccg‑ctgccg > 1:570182/1‑288 (MQ=255)
cTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAAccg‑ctgcc > 1:453722/1‑287 (MQ=255)
cTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAAccg‑ctgccgctgc > 1:1680865/1‑288 (MQ=255)
cTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGa > 1:517820/1‑289 (MQ=255)
cTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGa > 2:1218568/1‑289 (MQ=255)
cTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGa > 2:683726/1‑289 (MQ=255)
cTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGa > 1:42160/1‑289 (MQ=255)
cTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGa > 1:1048946/1‑289 (MQ=255)
cTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATAACGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGa > 2:1572793/1‑289 (MQ=255)
cTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGAC‑ACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCGGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACAGCTGAAACCG‑CCGCCGCCGaa > 2:144366/1‑289 (MQ=255)
aaaGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAg < 1:1538183/286‑1 (MQ=255)
aaGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGt < 2:671315/289‑1 (MQ=255)
aaGAAAAAAGGTGCGGCGTACCGCGAATCGCCAACGGCTTTACCGGTAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGt < 2:1897943/289‑1 (MQ=255)
aaggctgaGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGACTGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATca < 1:914867/286‑1 (MQ=255)
tgcGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTg < 1:671782/186‑1 (MQ=255)
tgcGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTc < 1:1241273/289‑1 (MQ=255)
aTCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGcgcg > 1:1316375/1‑175 (MQ=255)
aTCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGaaa > 1:682662/1‑289 (MQ=255)
cAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGAACCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTG‑CCTGCCCCACCGATTACCCGAAGTTCCTAATTGCCACCAACAAGGGCTTCGGGGACCAAACCAAACTGGC‑ACCCGCTTGGCTGGGGGCCAAG‑TGGGCCAAGGCAAAAACGTAACCCCT‑AAACCGCCGGCCCCGGAAACGGGTTTA‑CACAACCCCGTGCCCTATGGAAAAAATg > 2:92339/1‑289 (MQ=255)
tttcccacaaaaGCACGCAAACAGGCAATGACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGa < 2:299315/280‑1 (MQ=255)
tttACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTgg < 1:260410/288‑1 (MQ=255)
tttACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGa < 2:1802249/289‑1 (MQ=255)
tttACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGa < 1:1218568/289‑1 (MQ=255)
tttACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGa < 2:584614/289‑1 (MQ=255)
tttACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGa < 1:381824/289‑1 (MQ=255)
ttACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGAc < 1:293309/289‑1 (MQ=255)
tACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACg < 1:1020423/289‑1 (MQ=255)
tACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACg < 1:1269155/289‑1 (MQ=255)
aCCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCgg > 1:1772227/1‑127 (MQ=255)
aTAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGctct > 1:1819593/1‑288 (MQ=255)
aTAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGGGGAGCAAGCGGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCCA‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGctct > 1:721869/1‑288 (MQ=255)
tAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCCA‑CCTCCGTCCCATATGGAAAAAATGGGCCGGAAGCTCTac > 2:1665937/1‑289 (MQ=255)
aaaGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGaa > 2:1484417/1‑123 (MQ=255)
aaaGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGaa < 1:1484417/123‑1 (MQ=255)
aaaGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTgg < 2:1883092/279‑1 (MQ=255)
aaaGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTgg > 1:1883092/1‑279 (MQ=255)
aCGCAAACAGGCAATTCCGAATGTAGAGTCGTTCCGCGAAGTTGTGGGAGTAAAAGGCATTCCGGGGAATGCAACCTCCTCAACCTGTACATTTGCCCTGCGAGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCGTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACAccc < 2:1049334/287‑1 (MQ=255)
cGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTg > 1:10632/1‑234 (MQ=255)
aaaCAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGc < 1:1994275/289‑1 (MQ=255)
aCAGGCAATTACGAAGGTAGAGTCGGTCCGCGACGCTGTGGGAGTAAAAGGCAGTCCGGTGATTGCAACCTCGTCAACCGGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACGACACAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTg < 2:1330222/289‑1 (MQ=255)
ggCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCGGAAAGTGGTGTATCAC‑ACTCCGGGCCATATGGAAAAAATGGGCTGGACGCTCTaca > 2:419678/1‑275 (MQ=255)
aTTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTa < 1:273488/289‑1 (MQ=255)
tACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGaaaaa < 2:1602192/250‑1 (MQ=255)
aCGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACa > 1:1375544/1‑289 (MQ=255)
aTGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACATccc < 1:712142/289‑1 (MQ=255)
agagtcgaTCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGgcg < 1:1561145/152‑1 (MQ=255)
agaggcgagccGCGAAGCGGGGGGAGTAAAAGGCATTCCGGTGATTGCCACCTTCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGc > 1:160181/10‑229 (MQ=255)
agtcgaTCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGt > 1:322766/6‑211 (MQ=255)
agtcgaTCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGt < 2:322766/206‑1 (MQ=255)
gtcgaTCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCt < 1:1906577/284‑1 (MQ=255)
aTCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTTCCATATGGAAAAAATGGGCTGGACGGTCTACACCCTGGAGCCGTTGCGTAACATCCAGGTGCTTGAGt > 2:1711339/1‑289 (MQ=255)
aTCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTa < 1:1454023/251‑1 (MQ=255)
aTCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCAGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGTTGTTGCGTa > 2:1529791/1‑271 (MQ=255)
aaGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTgg < 1:508537/236‑1 (MQ=255)
aaGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGctct < 2:275697/243‑1 (MQ=255)
tgGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTTCCGCTGAAAGTGGTTTATCAC‑ACACCGTGCCATCTGGAAAAAATGGGTTGGGCGCCCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGGTGGAGtgtaggagggtgga > 2:1319678/1‑276 (MQ=255)
gTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTAGACCCTGGAGCTGTTGCGTAACATCCCGGGGCCTGTGTTAACGGTGCTGGCTTcgc > 2:635887/1‑287 (MQ=255)
gTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTTGAGTTAACGGTGCTGGATTcc < 2:1461597/288‑1 (MQ=255)
aaaGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTTGAGTTAACCGTGCTGGATTCCCAGt > 2:1146803/1‑289 (MQ=255)
cATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATca < 2:987318/186‑1 (MQ=255)
cATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATca > 1:987318/1‑186 (MQ=255)
cATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTTGAGTTAACGGTGCTGGATTCCCAGtgctg < 2:453722/288‑1 (MQ=255)
tCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGt > 2:255654/1‑177 (MQ=255)
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GTATCGCAGCGTGGCGGCTCAGCAAGCACAATATAAAGACCAGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGAGCATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCAGTACCTGTACATTTGCCCTGCGCGA‑CGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGC‑TGGCTGTGGCGCAAGCTGGACGAAGGC‑AAAACGTTACCGCTGAAACCG‑CTGCCGCTGAAAGTGGTTTATCAC‑ACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTTGAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGG > CP042583/1927223‑1927779
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
