Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,931,127 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,931,1270GC99.7% 684.3 / NA 291intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (163/127);  minor base A (0/1);  total (163/128)
Fisher's exact test for biased strand distribution p-value = 4.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,931,1280CG99.3% 678.8 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (161/127);  total (162/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,931,1290TA99.3% 679.0 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (160/127);  minor base C (2/0);  total (162/128)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 291 total aligned reads displayed.

CACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGACTTCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGGCTGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCGCTAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTGCTACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCG  >  CP042583/1930847‑1931403
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
 aCCGGCTGCCAACAAGCCTTCAATCACAAACATCCCGAACCAGCCGGGATGCCCCATAAACCCAGGCATATCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGAGCGCCCATATAGAACAGCCCCATCATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAAt                                                                                                                                                                                                                                                                               <  2:233736/289‑1 (MQ=255)
     aCTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACTCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATcccc                                                                                                                                                                                                                                                                           >  1:1999569/1‑289 (MQ=255)
     aCTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATcccc                                                                                                                                                                                                                                                                           >  2:1539153/1‑289 (MQ=255)
     aCTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATccc                                                                                                                                                                                                                                                                            >  1:1775157/1‑288 (MQ=255)
      cTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCca                                                                                                                                                                                                                                                                          <  1:1372609/289‑1 (MQ=255)
             caaTCCTTCAATCACAAACATCCAGAACCAGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAgt                                                                                                                                                                                                                                                                   <  2:535912/289‑1 (MQ=255)
                           caAACATCCAGAACCAGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCaa                                                                                                                                                                                                                                                      >  1:1582063/1‑288 (MQ=255)
                                  ccgaaaCCACCCGGAGTTCCCCCTAAATCCCTGCACCCCCAACATCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATTAAGACCAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGtt                                                                                                                                                                                                                                              <  2:743336/285‑1 (MQ=255)
                                  ccAGAACCAGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGtt                                                                                                                                                                                                                                              <  1:787364/289‑1 (MQ=255)
                                          aGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCGGGccc                                                                                                                                                                                                                                       >  2:125177/1‑288 (MQ=255)
                                           gCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGccccc                                                                                                                                                                                                                                     >  1:1003600/1‑289 (MQ=255)
                                                gATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGttt                                                                                                                                                                                                                                >  2:1591053/1‑289 (MQ=255)
                                                  cgCCCCATAGATCCAAGCATCTCCAACATCGCGACGGAAAGCGGTGATCCCCGTGTTACCGCCAGCGGTGCGCCCAAATAGAACAGCCCCAGAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTg                                                                                                                                                                                                                               <  2:958662/287‑1 (MQ=255)
                                                                aTGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGAtt                                                                                                                                                                                                                 >  1:882959/1‑288 (MQ=255)
                                                                aTGCATCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTc                                                                                                                                                                                                                <  1:85136/289‑1 (MQ=255)
                                                                    aTCTCCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCg                                                                                                                                                                                                            >  2:1513383/1‑289 (MQ=255)
                                                                       tcCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCg                                                                                                                                                                                                            <  2:334553/286‑1 (MQ=255)
                                                                       tcCAACAGCGCGCCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCg                                                                                                                                                                                                            >  1:334553/1‑286 (MQ=255)
                                                                               cgcgcCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACAccc                                                                                                                                                                                                    >  2:68004/1‑286 (MQ=255)
                                                                                gcgcCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCca                                                                                                                                                                                                                                                                          <  1:969843/215‑1 (MQ=255)
                                                                                gcgcCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCca                                                                                                                                                                                                                                                                          <  2:1138768/215‑1 (MQ=255)
                                                                                gcgcCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGa                                                                                                                                                                                                 <  2:1439536/288‑1 (MQ=255)
                                                                                gcgcCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACACCAGTGTTTTCGTACCAATCCAGGTTCTTGCCCCCAGTTTGCGCCTCCAAAGATTCACCGGAACACCCAGaa                                                                                                                                                                                                >  2:276154/1‑289 (MQ=255)
                                                                                 cgcCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCt                                                                                                                                                                                                                                            <  2:319985/244‑1 (MQ=255)
                                                                                 cgcCGGAAAGCGGTGATCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCAGGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCGCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCGGaa                                                                                                                                                                                                >  1:1195607/1‑288 (MQ=255)
                                                                                       aaaggggtgctCCCAGTGTTAACGCCAGCCGTGCGCCCAAATAGAACCGCCCCATAAGGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCata                                                                                                                                                                                         <  2:882959/279‑1 (MQ=255)
                                                                                              tgatCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACcaca                                                                                                                                                                                  >  2:193550/4‑289 (MQ=255)
                                                                                              tgatCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTCCGGACACCATTGCGCGGTGAGATAAATCATACCAAGGAAAAATCCGGCCTCCGCCGCACGCAGCCGAGTGCGAACTATCAGAAATCTCGCTTCAGGACCCGCCCATGCCATGGCTGCCCAAAGAACTCCCCAGCGCAGTGTTCTCGATCCAATCCCGGTTCTGGGCCGCAGTTTGCGGATCATAAGCTCCGCCGGCACACTCAGAAACGCCACTACcaca                                                                                                                                                                                  >  2:1485878/4‑289 (MQ=255)
                                                                                                   ccAGTGTTACAGCCAGCGGGGCGCCCATATAGAACAGCCCCATAATGCTGGGGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAAGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGaa                                                                                                                                                                             <  2:196042/289‑1 (MQ=255)
                                                                                                     aGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGaaaa                                                                                                                                                                           >  2:113745/1‑289 (MQ=255)
                                                                                                            aCGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTg                                                                                                                                                                     >  1:196042/1‑288 (MQ=255)
                                                                                                                        cgcCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGcc                                                                                                                                                                                                                                        >  1:476220/1‑209 (MQ=255)
                                                                                                                          cccATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAg                                                                                                                                                      <  2:1003600/289‑1 (MQ=255)
                                                                                                                          cccATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAg                                                                                                                                                      <  1:1164351/289‑1 (MQ=255)
                                                                                                                              tataGAACAGCCCCATAATGCTGGCGCGATTATGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTc                                                                                                                                                  >  1:1024035/1‑289 (MQ=255)
                                                                                                                               ataGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCa                                                                                                                                                 <  1:1504330/289‑1 (MQ=255)
                                                                                                                                   aaCAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCa                                                                                                                                                 <  1:247490/285‑1 (MQ=255)
                                                                                                                                    aCAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCAGACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACt                                                                                                                                           <  2:1283436/289‑1 (MQ=255)
                                                                                                                                     cAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTc                                                                                                                                          >  1:363892/1‑289 (MQ=255)
                                                                                                                                     cAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTc                                                                                                                                          >  2:66144/1‑289 (MQ=255)
                                                                                                                                        cgccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGACATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACAAATCCAGGGTCTGGCACCCAG‑TTGCGCCTCAAAAGATTCGCCAGAACAGGCAAAAACGCAAAATCCCCCACGAAAATGGCTACCGCCAAGGCAAAAGATTCAGTAACTCaa                                                                                                                                        >  2:694645/3‑288 (MQ=255)
                                                                                                                                        ccccATAATGGTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCAGCAAAAGATTCGCCGGAACACCCAGAAAC‑‑‑‑ATACCACAAAGAAAATGCCTGCACCCAGCGCATAAGCTTCA‑TTACTCAACCCgg                                                                                                                                   >  2:56818/1‑289 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCTATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTAACGGCCCATGCCATGGCGGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGACTCGCCGGAACACCCAACAACGCATATCACACAAAGACAATGCCTGCCCCCAGCGCATAAGCttacgtacccaa                                                                                                                                         >  2:1766675/1‑278 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATccc                                                                                                                                                                                                                                                                            >  2:1713360/1‑157 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATccc                                                                                                                                                                                                                                                                            <  1:1713360/157‑1 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTGCCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATCCCACAAAGAAAATCCCTGCTCCCAGCGCATAAGCATAC‑TTACTCaa                                                                                                                                        >  2:173130/1‑288 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGaa                                                                                                                                                                                                <  2:1171984/233‑1 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGa                                                                                                                                                                                                 >  1:114448/1‑232 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGa                                                                                                                                                                                                 <  2:1146171/232‑1 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAAc                                                                                                                                                                                              <  1:268350/235‑1 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCaa                                                                                                                                        >  1:1068053/1‑288 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCaa                                                                                                                                        >  1:1703872/1‑288 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCaa                                                                                                                                        >  1:6571/1‑288 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCaa                                                                                                                                        >  1:1831790/1‑288 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCCCCCAGCGCATAAGCTTCA‑TTACTCaa                                                                                                                                        >  1:6744/1‑288 (MQ=255)
                                                                                                                                        ccccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCACTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGAATATACCACAAAGAAAATGCCTGCTCCAATCGCATAAGCCTCA‑TTACTCaa                                                                                                                                        >  2:1034394/1‑288 (MQ=255)
                                                                                                                                         ctcgtAATGGTGGCTCGATTGAGCTGCGGAACACGCGGCGTGCGGAGATAAATCAATCCAGCGAAATATCCGGCCTCAGAAGCACGAAGCAGATGACGATCTATCAGACATTTCCCTTCAGTATCGGCCCCTGCCATGGCTGCCGAAAGAAATCCCCACAGCACTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTGTGCGCATCAAGAGATTCGCCGGAACACCCAGTAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAAcc                                                                                                                                      <  2:1350940/285‑1 (MQ=255)
                                                                                                                                         cccATAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAAc                                                                                                                                       >  1:1257818/1‑288 (MQ=255)
                                                                                                                                             tAATGCTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGt                                                                                                                                  <  2:181090/289‑1 (MQ=255)
                                                                                                                                                  cTGGCGCGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTa                                                                                                                                                                                                                                                          >  2:267440/1‑165 (MQ=255)
                                                                                                                                                     gcgcGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCg                                                                                                                                                                                                            <  1:414230/208‑1 (MQ=255)
                                                                                                                                                     gcgcGATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCaa                                                                                                                             >  1:1076945/1‑286 (MQ=255)
                                                                                                                                                      cgcgATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACt                                                                                                                                           >  1:1465165/1‑271 (MQ=255)
                                                                                                                                                      cgcgATTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACt                                                                                                                                           <  2:1465165/271‑1 (MQ=255)
                                                                                                                                                          aTTACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCCTAAGCGTCA‑TTACTAAACCCGGGATCAAt                                                                                                                            >  2:579546/1‑282 (MQ=255)
                                                                                                                                                            tACGCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGt                                                                                                                   <  2:1645450/289‑1 (MQ=255)
                                                                                                                                                               gCTGCGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGATTCA‑TTACTCCACCCGGTATCAATCTGGTAgg                                                                                                                    >  1:803757/1‑285 (MQ=255)
                                                                                                                                                                   cGGAAACCATTGCGAGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTg                                                                                                            >  1:1288524/1‑289 (MQ=255)
                                                                                                                                                                       aaCCATTGCGAGGTAAGATAAATAATACCAGGGAAAAATCCTGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCa                                                                                                         <  2:471787/288‑1 (MQ=255)
                                                                                                                                                                             tgcgaggTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAACATGGTAGGTCTGTTTGGCAAAACCGa                                                                                                  >  1:1547713/6‑289 (MQ=255)
                                                                                                                                                                                    tGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGc                                                                                                          >  1:571446/1‑274 (MQ=255)
                                                                                                                                                                                      agaTAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATAttcgaa                                                                                          <  2:1076459/288‑5 (MQ=255)
                                                                                                                                                                                       gaTAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATAttcgaac                                                                                         <  1:1657197/288‑6 (MQ=255)
                                                                                                                                                                                                tACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGGAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGaaa                                                                               <  2:1861182/289‑1 (MQ=255)
                                                                                                                                                                                                tACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACTCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAg                                                                                                                                                      >  2:246020/1‑219 (MQ=255)
                                                                                                                                                                                                 aCCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGaaa                                                                               >  1:71670/1‑288 (MQ=255)
                                                                                                                                                                                                 aCCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAAc                                                                              >  1:1236790/1‑289 (MQ=255)
                                                                                                                                                                                                  ccAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAAc                                                                              >  1:1103168/1‑288 (MQ=255)
                                                                                                                                                                                                  ccAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACg                                                                             <  1:113745/289‑1 (MQ=255)
                                                                                                                                                                                                  ccAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACg                                                                             <  1:1799785/289‑1 (MQ=255)
                                                                                                                                                                                                     gggAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATcc                                                                                                                                                                                                                                                   >  2:922891/1‑121 (MQ=255)
                                                                                                                                                                                                     gggAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATcc                                                                                                                                                                                                                                                   <  1:922891/121‑1 (MQ=255)
                                                                                                                                                                                                      ggAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCa                                                                          >  1:141344/1‑288 (MQ=255)
                                                                                                                                                                                                                            aCGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAAc                                                  <  1:284368/289‑1 (MQ=255)
                                                                                                                                                                                                                                     agTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCACCCCGGTATCCATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCAAGAAACGCCAGCACACACAGCGC‑CAACAAACACGGaacaaaa                                         >  2:1900950/1‑284 (MQ=255)
                                                                                                                                                                                                                                     agTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTaa                                          >  1:444878/1‑288 (MQ=255)
                                                                                                                                                                                                                                       tGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCCCAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGCGAAACGCCAGCACATACAGAGC‑CAACATAAACGAAATTaacc                                        >  2:253600/1‑286 (MQ=255)
                                                                                                                                                                                                                                            tatATCGGGAATTCGGCGTCAGGATCGGCCCAGGCCATGGCTGCCGAAAGAAAGCCCCACGGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGAGCATCAAACGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGcaca                                   <  2:1381394/286‑1 (MQ=255)
                                                                                                                                                                                                                                            aCTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGCacac                                  >  1:58443/1‑289 (MQ=255)
                                                                                                                                                                                                                                            aCTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTAGCAAACTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGATAAACGCCAGCACATACAGACG‑CAACAAAAACGGAATTAAACGcaca                                   >  2:1975467/1‑288 (MQ=255)
                                                                                                                                                                                                                                               aTCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGca                                     >  1:1761448/1‑283 (MQ=255)
                                                                                                                                                                                                                                                 cAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGCACAAC‑TAAACGGAATTAAACTGACACGGttt                             >  2:641969/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ttCGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGCACACGGTTTttcttc                       >  1:144047/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          cGCTTCAGTATCGGCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGCACACGGTTTTTCTTcac                     >  2:1108201/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           gcgcgaGTATCTGCCCATGCCAGGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCAGGCCCCCAGTTTGCGCATCAAAGGATTCGCCGGAACACCCAAAAACGCATATACCACACAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGCACACGGTTTTTCTTcacca                   <  2:1202565/284‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gCCCATGCCATGGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATACACGGAATTAAACGTACACGGTGTTTCTTCACCACGGCGTCAAGCa       >  1:1314367/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tgccatgGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGca                                     <  1:1931939/254‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tgccatgGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCg  >  2:379582/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tgccatgGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCg  >  2:1086639/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tgccatgGCTGCCGAAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTCGAACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCg  >  2:1780294/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
CACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCGGGATGCCCCATAAATCCATGCATCTCCAACAGCGCGCCGGAAAGCGGACTTCCCAGTGTTAACGCCAGCGGTGCGCCCATATAGAACAGCCCCATAATGCTGGCGCGATTACGCTGCGGAAACCATTGGCTGGTGAGATAAATCATACCAGGGAAAAATCCGGCCTCCGCAGCACGAAGCAGAGTGCGAACTATCAGAAATTTCGCTTCAGTATCGGCCCATGCCATGGCTGCGCTAAGAAATCCCCACAGCAGTGTTGTCGTACCAATCCAGGTTCTGGCCCCCAGTTTGCGCATCAAAAGATTCGCCGGAACACCCAGAAACGCATATACCACAAAGAAAATGCCTGCTCCCAGCGCATAAGCTTCA‑TTACTCAACCCGGTATCAATCTGGTAGGTCTGTTTGGCAAAACCGATATTGCTACGGTCGAGAAACGCCAGCACATACAGCGC‑CAACATAAACGGAATTAAACGCACACGGTTTTTCTTCACCACGGCGTCAAGCAAAGCG  >  CP042583/1930847‑1931403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A