Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,938,750 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,938,7500AT98.2% 518.2 / ‑6.5 233intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/2);  major base T (112/112);  minor base C (2/2);  total (114/119)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
*CP0425831,938,7510GC97.0% 511.5 / NA 233intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/5);  new base C (111/113);  total (114/119)
Fisher's exact test for biased strand distribution p-value = 4.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
*CP0425831,938,7520CG99.6% 524.3 / NA 233intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (113/117);  total (114/119)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 233 total aligned reads displayed.

CAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCAGTCAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATAGTGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TAGCAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGACCTGCCTTACCACAACGCCGCTACG  >  CP042583/1938476‑1939030
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                      
cAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTaa                                                                                                                                                                                                                                                                             <  1:295859/288‑1 (MQ=255)
              ccGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAgcg                                                                                                                                                                                                                                                              <  1:714873/289‑1 (MQ=255)
                 cgcATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTaa                                                                                                                                                                                                                                                                             >  1:274946/1‑271 (MQ=255)
                 cgcATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGca                                                                                                                                                                                                                                                            >  1:834995/1‑288 (MQ=255)
                              cGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCg                                                                                                                                                                                                                                              <  2:1887111/289‑1 (MQ=255)
                               gaagcctcacAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGa                                                                                                                                                                                                                                             <  1:869903/280‑1 (MQ=255)
                                aagcctcacAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGag                                                                                                                                                                                                                                            >  1:1394750/9‑288 (MQ=255)
                                aagcctcacAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCCTATTAAGCGCACCACTGGCAAAGCGAt                                                                                                                                                                                                                                            >  1:1762390/9‑289 (MQ=255)
                                aagcctcacAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAAACCCCCGCCTGGTGGCAAAAGCCCATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGGTTCGGAAAACCGC‑TTCGAAGATGATTAACCGGACTATTCAGCGGCCCCCCGGCAAAGCGaa                                                                                                                                                                                                                                            >  2:555766/9‑288 (MQ=255)
                                 agcctcacAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTaa                                                                                                                                                                                                                                                                             <  1:587857/248‑1 (MQ=255)
                                 agcctcacAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGGAAAACCGC‑TTCGAAGATGATTaa                                                                                                                                                                                                                                                                             >  2:587857/8‑255 (MQ=255)
                                  gcccacaaaGCGGAGAACAGCAATATTGTGTCTATTTTGCTTAACCGCAATTACGTGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATgg                                                                                                                                                                                                                                          <  2:1687819/282‑1 (MQ=255)
                                    ccaccaggCGGAAAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGt                                                                                                                                                                                                                                        <  2:514250/282‑1 (MQ=255)
                                       acaggCGGAGAACAGCCATATTGTGTCTATTTAGCTTAACCGCAATTCCGAGAAACATTCAGCGATTAGGGCGGAATTCAGTCACGTGACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGAt                                                                                                                                                                                                                                     <  2:690106/285‑1 (MQ=255)
                                       acAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGAt                                                                                                                                                                                                                                     <  1:241748/288‑1 (MQ=255)
                                         aaGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTa                                                                                                                                                                                                                                   <  1:1730890/289‑1 (MQ=255)
                                                        atatTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTa                                                                                                                                                                                                                                   <  1:1612980/274‑1 (MQ=255)
                                                           ttGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTa                                                                                                                                                                                                                                   <  1:610759/271‑1 (MQ=255)
                                                              tgtCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATgg                                                                                                                                                                                                                                          >  1:661303/1‑261 (MQ=255)
                                                                tCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGGAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCCGGGTTCCTTAAACCGC‑TTTGAAGATGGATAACCGGCCTATTCATCCCCCCCCTCGCAAAACGCAGGGTGATTACGGTTGTATGTTGGGCGACTAt                                                                                                                                                                                                             >  2:1389588/1‑288 (MQ=255)
                                                                    ttttGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTgcg                                                                                                                                                                                                                    >  1:116915/1‑277 (MQ=255)
                                                                     tttGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCg                                                                                                                                                                                                        >  1:1560279/1‑288 (MQ=255)
                                                                        gCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCat                                                                                                                                                                                                    >  2:1151076/1‑289 (MQ=255)
                                                                        gCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCGGCGCGCCTATCGCCGTCat                                                                                                                                                                                                    >  1:814919/1‑289 (MQ=255)
                                                                        gCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGAAGTGGTAGGGACTGTAAGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑CTCGGAGATGATTAAACGGCTTATTCAGCGCAACACTGGCAAAGCGAAGGGTGGTTACGGTTTGATGGTGCGCTCCttgctcccctat                                                                                                                                                                                                    >  2:1733613/1‑278 (MQ=255)
                                                                         cTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGGAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGGTGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCTCGGCTATCCCCGTCata                                                                                                                                                                                                   >  1:1534005/1‑289 (MQ=255)
                                                                            aaCCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGc                                                                                                                                                                                                                                                    >  1:4863/1‑237 (MQ=255)
                                                                            aaCCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGc                                                                                                                                                                                                                                                    <  2:4863/237‑1 (MQ=255)
                                                                             aCCGCAATTCCGGGCAACGTTATGCGATGATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGt                                                                                                                                                                                               <  2:1919140/289‑1 (MQ=255)
                                                                                  aaTTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGATTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAGGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatg                                                                                                                                                                                          <  2:403010/289‑1 (MQ=255)
                                                                                         ggCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGtt                                                                                                                                                                                   >  2:1203760/1‑289 (MQ=255)
                                                                                           caacattcagCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCCGCGCACCCCTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTGCATTCGATGTTGc                                                                                                                                                                                 >  2:1127171/10‑289 (MQ=255)
                                                                                            aacattcagCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCa                                                                                                                                                                                <  1:13452/281‑1 (MQ=255)
                                                                                                         tATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTg                                                                                                                                                                                                <  2:638772/260‑1 (MQ=255)
                                                                                                                  aTTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAAACGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATTGCCGTCATATTGTTGATGCGATGTTGCACTGCCTTTGACGCAGCCCCttt                                                                                                                                                          >  1:519665/1‑289 (MQ=255)
                                                                                                                      aGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTGTTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATGTTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATc                                                                                                                                                       >  1:1117401/1‑288 (MQ=255)
                                                                                                                             ttACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGt                                                                                                                                                                                                                                        <  2:1019587/200‑1 (MQ=255)
                                                                                                                             ttACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGt                                                                                                                                                                                                                                        >  1:1019587/1‑200 (MQ=255)
                                                                                                                             ttACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGAt                                                                                                                                                  >  2:725862/1‑286 (MQ=255)
                                                                                                                                cTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGc                                                                                                                                            >  1:1298577/1‑289 (MQ=255)
                                                                                                                                  ggCGAATTAATTATTACCCGTGATGCCGATGTCCAGAAGCCTCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTTGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGa                                                                                                                                          <  2:1854932/289‑1 (MQ=255)
                                                                                                                                        ttAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCt                                                                                                                                    >  1:334253/1‑289 (MQ=255)
                                                                                                                                                    cTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGAGTTATTACGGTTGTATGCTGCGCGCCTATCGCCGCCATATTGTCGATGCGAGTTTGCGCTGCCATTAACGCAGCCCCTTTTTCCCGATTCATGCGAATATCTTTCCCCGCTGt                                                                                                                         >  2:1561557/1‑288 (MQ=255)
                                                                                                                                                     ttGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTTTCGATGCGACGTTGCACTGCCCTGAACGCAGCACCTTTATACCGATTCTGGCGAATATCTTTGCCCTCCGTg                                                                                                                        >  2:585212/1‑288 (MQ=255)
                                                                                                                                                       gATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCCCCGTCCTATTGTCGATGCGATGTTGCACTGCCCTGAACGCAGCGCCTTTATCCCGATTCTGGCGAATTTCCTCGCCCGCCGCGCCa                                                                                                                     >  2:911556/1‑289 (MQ=255)
                                                                                                                                                           gcagtctcCAGACCCCGCCAGAAGAAATCCCCCGCCTGGTGGAAAAAGCCGATGAAGTTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGa                                                                                                                 <  2:469176/285‑1 (MQ=255)
                                                                                                                                                             gATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCg                                                                                                                                                                                                        <  1:916924/200‑1 (MQ=255)
                                                                                                                                                             gATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGaaa                                                                                                               >  1:67610/1‑289 (MQ=255)
                                                                                                                                                             gATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGaaa                                                                                                               <  1:971218/289‑1 (MQ=255)
                                                                                                                                                             gATCTCCAGAACCCGCCAAAGGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGaaa                                                                                                               <  2:672406/289‑1 (MQ=255)
                                                                                                                                                              aTCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAAt                                                                                                              >  2:849852/1‑289 (MQ=255)
                                                                                                                                                              aTCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAAt                                                                                                              >  2:681863/1‑289 (MQ=255)
                                                                                                                                                                  ccAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCa                                                                                                          <  1:1464492/289‑1 (MQ=255)
                                                                                                                                                                   cAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAg                                                                                                         >  2:1993843/1‑289 (MQ=255)
                                                                                                                                                                       aTCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTCGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGt                                                                                                        <  1:1819023/286‑1 (MQ=255)
                                                                                                                                                                          cGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTAcatca                                                                                                  >  1:114129/1‑289 (MQ=255)
                                                                                                                                                                           gCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGaaa                                                                                                               <  1:130658/275‑1 (MQ=255)
                                                                                                                                                                           gCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGaaa                                                                                                               >  2:130658/1‑275 (MQ=255)
                                                                                                                                                                           gCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCa                                                                                                          <  1:809659/280‑1 (MQ=255)
                                                                                                                                                                                          ccGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGttt                                                                                  >  1:1742137/1‑289 (MQ=255)
                                                                                                                                                                                          ccGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGttt                                                                                  >  2:459220/1‑289 (MQ=255)
                                                                                                                                                                                             ccTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGaaa                                                                                                               >  2:1538351/1‑257 (MQ=255)
                                                                                                                                                                                              cTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTg                                                                              <  1:555766/289‑1 (MQ=255)
                                                                                                                                                                                              cTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACGGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTg                                                                              <  1:820617/289‑1 (MQ=255)
                                                                                                                                                                                                 gtggCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGaa                                                                            >  1:1701447/1‑288 (MQ=255)
                                                                                                                                                                                                  tggGAAAGGCCAATGAAGGTGAGGCCGTGGTGGGAACTGACAGCCAAAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGAGCACCACGGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAAt                                                                           <  2:1631808/288‑1 (MQ=255)
                                                                                                                                                                                                  tggCAAAAGCCGATAAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAAt                                                                           <  1:1919750/288‑1 (MQ=255)
                                                                                                                                                                                                    caaaaaGCCGAGGAAGGTGCCGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCGGGTTTCGTAAAACCGC‑TTCGAAGAGTATTAACCGGCTTATCCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCTTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATcc                                                                         <  2:788319/286‑1 (MQ=255)
                                                                                                                                                                                                       aaggCCGATGAAGGTTACGAGTGGGTAGGGACTGAACGCCAGAACCGCCAGG‑ACAGCGGGTTTAGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCGGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAAt                                                                     <  2:1230083/286‑1 (MQ=255)
                                                                                                                                                                                                       aaaGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAAt                                                                     <  2:809838/289‑1 (MQ=255)
                                                                                                                                                                                                            cGATGCAGGTTACGACGTGGTAGGGACTGTACGCCAGAACGGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAATGCGATGGGTGATTACGGTTGTATGCTGCGCGCTTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATTCCGAGCGTGAGTTTGGTGAATCCAAATACAg                                                                 <  1:1088941/288‑1 (MQ=255)
                                                                                                                                                                                                                  aGGTGAGGAGGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAGCCGGCTTATTCAGCGAACCCCTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTa                                                            <  2:1106536/287‑1 (MQ=255)
                                                                                                                                                                                                                     ttACGACGTGGTAGGGACGGTACTCCGGAACGGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TGCGAAGATGATGAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATgcgc                                                       <  2:1182722/289‑1 (MQ=255)
                                                                                                                                                                                                                        cgacgTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTg                                                    >  2:447993/1‑289 (MQ=255)
                                                                                                                                                                                                                             tGGTAGGGACGGTACGACGGACCCGCCAGG‑ACAGTTGGTTTCGTAAACCCCA‑TTGGAGGATGATTAACCGGCTTGTCCAGCGCACCACTGGCAAGGCGATGGGTGATAACGGTGGTATGCTGCGCGCCTCTCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTa                                                <  2:959875/288‑1 (MQ=255)
                                                                                                                                                                                                                                tAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAAtt                                             <  1:94266/288‑1 (MQ=255)
                                                                                                                                                                                                                                tAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAAtt                                             <  2:114129/288‑1 (MQ=255)
                                                                                                                                                                                                                                tAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAAtt                                             <  1:453837/288‑1 (MQ=255)
                                                                                                                                                                                                                                  gggACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGa                                          >  1:680958/1‑289 (MQ=255)
                                                                                                                                                                                                                                       tGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTAc                                     >  1:145052/1‑289 (MQ=255)
                                                                                                                                                                                                                                       tGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTAc                                     >  1:1513757/1‑289 (MQ=255)
                                                                                                                                                                                                                                        ttgagCCAG‑ACCGCCAGGTACAGCTGGTTTCGTAAACCCGC‑TTCGAAGATGATTACCCGCCTTATTCAGCGCACCACTGGAAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACg                                    <  2:1402980/285‑1 (MQ=255)
                                                                                                                                                                                                                                         tACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTcgatg                                                                                                                                                                                          <  1:1831802/138‑1 (MQ=255)
                                                                                                                                                                                                                                         tACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTc                                                                                                            <  2:932406/216‑1 (MQ=255)
                                                                                                                                                                                                                                         tACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAAtt                                             >  1:733790/1‑279 (MQ=255)
                                                                                                                                                                                                                                         tACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGAt                                         >  1:204246/1‑283 (MQ=255)
                                                                                                                                                                                                                                         tACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACg                                    >  1:428658/1‑288 (MQ=255)
                                                                                                                                                                                                                                         tACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACg                                    >  1:1073221/1‑288 (MQ=255)
                                                                                                                                                                                                                                         tACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACg                                    >  2:1792091/1‑288 (MQ=255)
                                                                                                                                                                                                                                         tACGCCAGAACCGCCAGG‑AAAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAAtt                                             <  2:733790/279‑1 (MQ=255)
                                                                                                                                                                                                                                              cAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGCGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTTATTGGATGTCCGACCTgg                              >  2:1748713/1‑289 (MQ=255)
                                                                                                                                                                                                                                              cAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTgg                              >  1:1930498/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  cccGCCAGG‑ACACCTATTGTCGTAAATCCGCTTCGCATG‑TGATTAACCGACTTATTCGGCGCACCACTGGAAAAGCGATGGGTGATTACGTTTGTCTGCTGCGCGCCTATCGCCGTCCTATTGTCGTTGCGATGTTGCACTGCCATGACCGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGAc                          <  2:206859/288‑1 (MQ=255)
                                                                                                                                                                                                                                                   ccGCCAGG‑GAAGCTGGTTTCGTAAAACGGC‑TGCGAAGATGATTAACCGGTTTATTCAGCGCACCCCTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGAcc                         <  2:1608791/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    ccgcagcaaaagatGGTTTCGTAAAGCCGC‑TACGAATAATCATCACCGGCTGAGTCTGGGCACCACTGGCAAAGGGATGGGTGATTACGGTTGTATGTTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGAcc                         <  2:1073221/276‑1 (MQ=255)
                                                                                                                                                                                                                                                          g‑ACAGCTGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATCAATTTGATGTACGACCTGGTGACCTGCttt                   >  1:206859/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 tGGTTTCGTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGACCTGCCTTACCACaa            <  1:1107764/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cgaaaaaCCGC‑TTGGAAGATGATTAACCGGCTTATTCAGCGAACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGACCTGCCTTACCACAAcgccgc      <  2:1971273/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gTAAAACCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGGGTTGGGTGAATCCAAATAAAGTTTGATGCGCCTGATCAATTTGTTTTACGACATGGTGACCTGCCTTACCACAAcgccgc      >  2:1471840/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           aaaCCGC‑TTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGACCTGCCTTACCACAACGCCGCTACg  <  1:409298/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                      
CAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCAGTCAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATAGTGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGG‑ACAGCTGGTTTCGTAAAACCGC‑TAGCAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGACCTGCCTTACCACAACGCCGCTACG  >  CP042583/1938476‑1939030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A