Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F210 I1 R1
|
4928 |
340.1 |
5480506 |
96.9% |
5310610 |
252.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
613,345 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 613,345 | 0 | G | C | 99.4%
| 829.5
/ NA
| 347 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base C (187/158); total (187/160) |
| Fisher's exact test for biased strand distribution p-value = 2.12e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 613,346 | 0 | C | G | 99.7%
| 828.0
/ NA
| 347 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (187/159); total (187/160) |
| Fisher's exact test for biased strand distribution p-value = 4.61e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 613,347 | 0 | T | A | 99.7%
| 834.1
/ NA
| 347 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (187/159); minor base G (0/1); total (187/160) |
| Fisher's exact test for biased strand distribution p-value = 4.61e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 347 total aligned reads displayed.
CGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCACTACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCAGCTCATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGGCTAATGC‑TCAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAAACTCGTGCTAATGCTGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTATTTGTGATCCAGATAGT > CP042583/613077‑613622
|||
cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTg > 1:103496/1‑289 (MQ=255)
cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTg > 2:931292/1‑289 (MQ=255)
cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTg > 1:434960/1‑289 (MQ=255)
cGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCACACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTg > 1:100882/1‑289 (MQ=255)
ggTGAAAGAACCGCTCCAGCTGCTGCTGCAGGACCTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTgg < 2:2273482/289‑1 (MQ=255)
aGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTcg < 1:412596/289‑1 (MQ=255)
aGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTcg < 1:2591182/289‑1 (MQ=255)
aaacgcgCCAGCTGCTTCTGACGGAACTGTAATCACTGGCGGAATAGGTACCAGAAATACCCCACCCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTCCGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTcgcg < 2:186391/286‑1 (MQ=255)
cAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTAt < 1:155057/289‑1 (MQ=255)
tgctgACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATc < 2:2650536/283‑1 (MQ=255)
tgctgACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATc > 1:2650536/1‑283 (MQ=255)
aCTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTa > 2:382291/1‑289 (MQ=255)
tGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTAtt > 1:2002769/1‑289 (MQ=255)
tGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCt < 2:1403682/263‑1 (MQ=255)
ggcggcATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaatgacgtc > 1:132883/1‑282 (MQ=255)
cggcATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCg > 2:2105151/1‑273 (MQ=255)
cggcATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCg < 1:2105151/273‑1 (MQ=255)
ggcATAGGTACCAGAAATATCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGaatgacgtcgaa < 1:1928285/289‑11 (MQ=255)
tatCCCACTCACCCGCTGAACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCa < 1:927873/289‑1 (MQ=255)
cACTCCCCCGCTGAACTCATGTGCTGATCGTTACCGGTCACCTGGCCTCCATTGTCCGGACGATCTGATTGCAGTCCGGCAGACATGCCACAGCTATTACGTTCATCCAGCGAATCGTTCCACGACATGCGGTGTATGGTGCTGGGGCTACTGTTTTGCAGGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCAc < 2:2085517/289‑1 (MQ=255)
ccgctgaactCAGGTGCTGATAGTTACCGCTCACCTGGTCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATc < 1:1911604/282‑1 (MQ=255)
tgaactCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGACGGGGAGCGAAATCG‑ACAGATAACTCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCCCCCGTCACCaacacccaca > 2:1372031/4‑281 (MQ=255)
aactCAGGTGCGTATAGTTACCGCTCACCTCGCCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCGTCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACAtt < 2:456565/288‑1 (MQ=255)
tGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTTGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAAc < 2:193897/286‑1 (MQ=255)
tGCTGATAGTGACCGCTCACCTGGGCTCCATTGTCCGGACGAGCGGATTGCAGTCCGGCAGACATGCCCCAGCTAGTACGTGCATCCAGCGTATCGTTCCAAGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTGGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGTCGTCGAAATTGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAAc < 1:1965225/286‑1 (MQ=255)
gCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACctgc < 1:705311/289‑1 (MQ=255)
cTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTTGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTGGTCGCGATCTTTATCTTCGTAGTGGGTCGGATTGAATGACGTCGAAATCGAGAGTTTCTC‑CCAGTCCCCACTATCAACATTAAAACctgcg > 2:2246012/1‑288 (MQ=255)
tAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCtgtg < 1:1742439/288‑1 (MQ=255)
cGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGc < 2:2485029/289‑1 (MQ=255)
cTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCTAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCgg > 1:125152/1‑289 (MQ=255)
cATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTc < 1:554314/289‑1 (MQ=255)
tCCGGACGATCGGATTGCAGTCCGGCAGATATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCtgtg > 1:2133400/1‑261 (MQ=255)
aCGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTcca > 1:681641/1‑288 (MQ=255)
aTCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAg > 2:1155061/1‑289 (MQ=255)
cGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGTGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCt > 1:95440/1‑173 (MQ=255)
gATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGtt < 2:132883/288‑1 (MQ=255)
ttGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGa < 1:2086259/289‑1 (MQ=255)
tGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGAt > 2:680175/1‑289 (MQ=255)
tCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATTTAg > 2:1922632/1‑288 (MQ=255)
cGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGTTCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAg > 1:1262792/1‑286 (MQ=255)
cGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGTTCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAg < 2:1262792/286‑1 (MQ=255)
gACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCCTTCCACCCGGTTTGATGTAGCAGGTTg > 1:1472802/1‑288 (MQ=255)
gCTATTACGTTCATCCAGCGTTTCGTTCCCGGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTa < 2:2419332/282‑1 (MQ=255)
gCTATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTg > 2:239208/1‑289 (MQ=255)
tATTACGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTg < 1:2690046/287‑1 (MQ=255)
aCGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGa < 2:2702632/234‑1 (MQ=255)
aCGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGtt > 2:202366/1‑256 (MQ=255)
aCGTTCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGttt > 2:1697303/1‑289 (MQ=255)
tCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGt < 1:2455070/142‑1 (MQ=255)
tCATCCAGCGTATCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGt < 1:382291/288‑1 (MQ=255)
tCAACCGGCGTATCGTTCCACGACATTCGGTGTATGGGTCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTg < 2:2524828/289‑1 (MQ=255)
aTCGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGt < 1:1403735/289‑1 (MQ=255)
cGTTCCACGACATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCAcc > 1:2411276/1‑175 (MQ=255)
gCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTcg > 2:515556/1‑97 (MQ=255)
gCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGcc < 1:2732301/279‑1 (MQ=255)
tgtATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTg < 2:101059/288‑1 (MQ=255)
aTGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCg > 2:816994/1‑289 (MQ=255)
tGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGt < 2:27577/289‑1 (MQ=255)
ggTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAatat < 1:2717365/158‑1 (MQ=255)
ggTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGCTTGAGGTTTAGTGGGGTTGTCGGTTGGTCCACGGCTAAGCGGATCg > 2:1513253/1‑287 (MQ=255)
tGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCg > 1:513481/1‑285 (MQ=255)
tGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCg > 1:85640/1‑285 (MQ=255)
tGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCg > 2:1429796/1‑285 (MQ=255)
tgtgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCa > 2:2194791/1‑155 (MQ=255)
tgtgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGc < 1:913907/193‑1 (MQ=255)
tgtgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGt > 1:783606/1‑195 (MQ=255)
tgtgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTg < 1:222101/249‑1 (MQ=255)
tgtgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGcc > 1:1135737/1‑265 (MQ=255)
tgtgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGttt > 1:649241/1‑289 (MQ=255)
tgtgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGttt > 1:1940233/1‑289 (MQ=255)
tgtgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGttt > 1:1662503/1‑289 (MQ=255)
tgtgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGttt > 1:2491039/1‑289 (MQ=255)
tgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCt < 2:9150/93‑1 (MQ=255)
tgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGCTAAGCTGATGGTATGttttt > 2:564984/1‑289 (MQ=255)
tgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAAGCGTTTGCCCCACGACTAAGCTGATCGCCTttttg > 2:1587613/1‑287 (MQ=255)
tgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCGCGCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGTTCGTGGAGGCGTCTGCATTCCACAAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTGGGCCCACGGAAAAGCTGATCGTGTGttttt > 2:1064190/1‑289 (MQ=255)
tgGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCGTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGttttt > 1:1365234/1‑289 (MQ=255)
gCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAACCTGGTTGACGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGC‑TATCTCTCCCGTCCCCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGAGGTAGCAGGTTGTCGTAAAGATTGCGGTTTAGTGGGGTAATCGGTTGGCCCACGTTGACGCTGCTCGTCGGtctctc > 2:173350/1‑283 (MQ=255)
tACTGTTTTGCAGTTCATAGCCACCCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTc < 2:43270/289‑1 (MQ=255)
aCTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGt < 2:2165049/276‑1 (MQ=255)
aCTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGt > 1:2165049/1‑276 (MQ=255)
aCTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGt > 1:1834482/1‑287 (MQ=255)
tGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGACGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGATTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCt > 1:2302277/1‑288 (MQ=255)
tGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCa > 2:756434/1‑288 (MQ=255)
tGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTACAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTGGATGTAGCAGGTTGGCGTCAAGATGGAGGTTTAGTGGGGTATTGGGTTGGCCCCCGGAGAAGCTGATCGTCGGTTTTGCGTACTgcgaa > 2:2724737/1‑286 (MQ=255)
aTGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCg < 2:878804/288‑1 (MQ=255)
aTGTCATAGCCAACCCGACCACCGTTAACTAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCg < 1:134872/288‑1 (MQ=255)
gTCATAGCCAACCCGACCACCGTTCCCGAAGGGGAGCGAACTCG‑ACAGATAAATCTGGTTGTCGCGCTCTTTATCTTCGAAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCCGGTTTGATGTAGCCGGTTGGCGTAAAGATGGAGGTTTAGTGGGGTAATCGGTTGGCCCGCGGATAAGCTGATCGTCTGTTTTACGTTCTGAGCagtgcct > 2:1202196/1‑283 (MQ=255)
gTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGa < 2:743615/196‑1 (MQ=255)
gTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGa > 1:743615/1‑196 (MQ=255)
gTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATc > 1:593990/1‑285 (MQ=255)
cATAGCCAACCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTc > 1:1194261/1‑289 (MQ=255)
aaCCCGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTTGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTAt < 1:2383724/289‑1 (MQ=255)
cccGACCACCGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTAttt > 1:1171373/1‑289 (MQ=255)
ccGACCACCGTTACCGAAGGGGGGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTATTtg < 2:103496/289‑1 (MQ=255)
acacccccGTTGACGAAGGGGA‑GCGAAAGCGACAGATAAATCTGGTTGGCGAGATCTTTATCTTCTGAGTGGGTCATATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTATTtgt < 2:625803/287‑1 (MQ=255)
caccGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTATTTGTGAt > 2:1786020/1‑288 (MQ=255)
cGTTACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTAttt < 1:275592/280‑1 (MQ=255)
tACCGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTATTTGTGATCCAGATa < 2:1963448/289‑1 (MQ=255)
ccGAAGGGGAGCGAAATCG‑ACAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAATGACGTCGAAATCGAGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTATTTGTGATCCAGATAGt < 1:1786020/289‑1 (MQ=255)
|||
CGGTGAAAGAACCGCTCCAGCTGCTGCTGACGGAACTGTAATCACTGGCGGCATAGGTACCAGAAATATCCCACTCACCCGCACTACTCAGGTGCTGATAGTTACCGCTCACCTGGGCTCCATTGTCCGGACGATCGGATTGCAGTCCGGCAGACATGCCCCAGCTATTACGTTCATCCAGCGTATCGTTCCAGCTCATGCGGTGTATGGTGCTGTGGCTACTGTTTTGCATGTCATAGCCAACCCGACCACCGTTACCGAAGGGGAGGCTAATGC‑TCAGATAAATCTGGTTGTCGCGATCTTTATCTTCGTAGTGGGTCGTATTGAAACTCGTGCTAATGCTGA‑TATCTCTCCAGTCACCAATATCAACATTAAAACCTGCTGTGATGTTGGCGGTCGTGGAGGCGTCTGCATTCCACCAGGTTTGATGTAGCAGGTTGGCGTAAAGATTGAGGTTTAGTGGGGTAATCGGTTGGCCCACGGATAAGCTGATCGTCTGTTTTTCGTCCTGCGCATCGCTGTCGTTGTATTTGTGATCCAGATAGT > CP042583/613077‑613622
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
