Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 746,792 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583746,7920AT99.7% 741.1 / NA 311intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (141/168);  minor base C (1/0);  total (143/168)
Fisher's exact test for biased strand distribution p-value = 4.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583746,7930GC99.4% 733.0 / NA 311intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base C (141/168);  total (143/168)
Fisher's exact test for biased strand distribution p-value = 2.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583746,7940CG99.7% 750.1 / NA 311intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (142/168);  total (143/168)
Fisher's exact test for biased strand distribution p-value = 4.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 311 total aligned reads displayed.

TGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTAGTACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑AGCATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGAGCGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCT  >  CP042583/746520‑747069
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                     
                  tGCGCGATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGTTTGGGTTCCTACT‑TCGTTGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGTGGGGGCGGCTGTCGGACTGTTATGGTTGCCGTCCgggtgcgctggc                                                                                                                                                                                                                                                       >  1:870/1‑279 (MQ=255)
                  tGCGCGATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTAt                                                                                                                                                                                                                                                                               >  1:2366718/1‑265 (MQ=255)
                  tGCGCGATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGc                                                                                                                                                                                                                                                      <  1:1656140/289‑1 (MQ=255)
                    agcgATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGCCGTCAGGCGTTACTTTTCCCTCTCTGTCTGGGTCTTTACGACTTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTCTCTGGCGGGCGGGATGTTTTTACGATGGCTGCTGGGGCTGCTGTCGGCTCTTATTGGTCGCTGCCCGTTGCTGC‑TGgggg                                                                                                                                                                                                                                                    >  2:2116185/2‑289 (MQ=255)
                       gATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGa                                                                                                                                                                                                                                                  <  1:748896/288‑1 (MQ=255)
                       gATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAg                                                                                                                                                                                                                                                 <  1:224219/289‑1 (MQ=255)
                         ttattattGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAgtg                                                                                                                                                                                                                                               <  2:503065/289‑1 (MQ=255)
                         ttattattGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAgtg                                                                                                                                                                                                                                               <  2:1312248/289‑1 (MQ=255)
                            ttattGGGTAAGAAATTTCATGAAAAATGAATTAGCTTCCGTTGCCAGGCTGGGACGTCAGGCGTTACTTTTCCCTCTCGGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGGATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACG‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAgtggtg                                                                                                                                                                                                                                            <  2:2392319/289‑1 (MQ=255)
                            ttattGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAgtggtg                                                                                                                                                                                                                                            >  1:209685/1‑289 (MQ=255)
                                   cGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTAGAATGGCTGCTGGGGCTGCTGTGGGATCGTATTGGTGTCCGTCCGGTGGTGCGTGCGGGGGGTGGTGTGCtta                                                                                                                                                                                                                                      >  2:582421/1‑288 (MQ=255)
                                   cGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGa                                                                                                                                                                                                                                                  >  2:526277/1‑276 (MQ=255)
                                   cGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTa                                                                                                                                                                                                                                     >  1:2733966/1‑289 (MQ=255)
                                               atgcaAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTc                                                                                                                                                                                                                         <  1:598071/289‑1 (MQ=255)
                                                               cTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCg                                                                                                                                                                                                                                                                         <  1:1032108/226‑1 (MQ=255)
                                                               cTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCg                                                                                                                                                                                                                                                                         >  2:1032108/1‑226 (MQ=255)
                                                               cTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTgg                                                                                                                                                                                                          >  1:2333274/1‑288 (MQ=255)
                                                                  ccGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCa                                                                                                                                                                                                      <  1:26886/289‑1 (MQ=255)
                                                                             cTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTg                                                                                                                                                                                              <  2:2733966/286‑1 (MQ=255)
                                                                             cTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGaa                                                                                                                                                                                            <  1:392122/288‑1 (MQ=255)
                                                                             atttgACTTCAGGCGTTACTTTTCCCGATCTGTCTGGTGCTTTCCGAATTTTCACCCTATCTCGGCAATGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGaa                                                                                                                                                                                            <  2:2047548/284‑1 (MQ=255)
                                                                                ggACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGGGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAAt                                                                                                                                                                                        >  1:1725631/1‑289 (MQ=255)
                                                                                ggACGTCAGGCGTTACCTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGa                                                                                                                                                                                             >  2:1275192/1‑284 (MQ=255)
                                                                                   cGTCAGGCGTTACTGTTCCCTCTCTGTCTGGTGCGTTACGAATTTTCAACCTATATCGGCAGCGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCAcc                                                                                                                                                                                                                             <  1:794533/249‑1 (MQ=255)
                                                                                          cGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTT‑TCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGtt                                                                                                                                                                              <  1:1091563/288‑1 (MQ=255)
                                                                                                      ctctctGTCTGGTTCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCa                                                                                                                                                                  <  1:2492052/289‑1 (MQ=255)
                                                                                                      ctctctGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCa                                                                                                                                                                  <  1:1335295/289‑1 (MQ=255)
                                                                                                           tgtttgGTGATTTGCGAATTTTCACCCTTTATCGGCAACGATATGATTCAACCGGGTATGTTGGCCGTGTGGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCa                                                                                                                                                             <  2:2462502/289‑1 (MQ=255)
                                                                                                             tctgGTGCTTTACGATTTTTCACCCTATACAGGCAACGTTATGATTCAACCCGTGATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATa                                                                                                                                                           <  2:927676/289‑1 (MQ=255)
                                                                                                             tctgGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATa                                                                                                                                                           <  1:2440182/289‑1 (MQ=255)
                                                                                                              ctgGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATa                                                                                                                                                           <  1:97361/288‑1 (MQ=255)
                                                                                                                       tACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGc                                                                                                                                                                                                                                                      >  2:1785949/1‑188 (MQ=255)
                                                                                                                               ttcaaCCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGc                                                                                                                                                                                                             >  1:701297/5‑221 (MQ=255)
                                                                                                                                   aCCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTTCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGgc                                                                                                                                         >  1:1520773/1‑285 (MQ=255)
                                                                                                                                    ccTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTgg                                                                                                                                          >  1:1963780/1‑283 (MQ=255)
                                                                                                                                    ccTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTgg                                                                                                                                          <  2:1963780/283‑1 (MQ=255)
                                                                                                                                     cTATATCGGCAACGATATGAGTCAACCCGGTGTTTTGGCCGTGGTGGATGAATATCAGGGGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCtgtg                                                                                                                                   <  2:1725631/289‑1 (MQ=255)
                                                                                                                                               taCGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATAcgccg                                                                                                                         <  1:2557819/288‑1 (MQ=255)
                                                                                                                                                 cGATATGTGTCACCCCGGGATGTGGGCGGTGTTGGGACGATATCAGACGGGCATGGTGTTGGTTCGTCCTCCGAGTGA‑CGCGTATCTGGCGGGCGTGCTGTTTTTACGGTGGCTGCTGGTGCCGCTGTCGGCTCGTCTTGGTCGCCGGCCGGTGATGC‑GGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAGCAATTCCCCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATAcgccg                                                                                                                         <  2:54141/287‑1 (MQ=255)
                                                                                                                                                  gATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCaa                                                                                                                      <  1:82385/289‑1 (MQ=255)
                                                                                                                                                              cccGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAACACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGTCATAAGCCTCTGTTTCATTGGCGTTGTGGGACTCGCGCCAATTTCGGAATc                                                                                                            >  2:1340683/1‑287 (MQ=255)
                                                                                                                                                              cccGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGTACAAt                                                                                                                                                                                        >  2:1141423/1‑211 (MQ=255)
                                                                                                                                                              cccGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCTCTGTGGGATACGCCGCAATTCAGGAATCCt                                                                                                          >  1:2612995/1‑289 (MQ=255)
                                                                                                                                                              cccGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCt                                                                                                          >  1:1555496/1‑289 (MQ=255)
                                                                                                                                                              cccGGTATGTTAGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCCGTTTCATTCGCGTTGTGGGATCCGCCCCAATTCAGGAATCCt                                                                                                          >  2:82697/1‑289 (MQ=255)
                                                                                                                                                                  gTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTAAGGAATCCTTCGa                                                                                                      >  1:1161503/1‑289 (MQ=255)
                                                                                                                                                                   tATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCa                                                                                                                                                             >  1:235579/1‑233 (MQ=255)
                                                                                                                                                                   tATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCa                                                                                                                                                             <  2:235579/233‑1 (MQ=255)
                                                                                                                                                                        tGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGTAATATTTCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCGGTTGGATACGCCCCAATTCAGGAAACATTCGAGAAGGc                                                                                                >  2:322507/1‑289 (MQ=255)
                                                                                                                                                                         ggCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAgg                                                                                                 <  2:2626177/287‑1 (MQ=255)
                                                                                                                                                                            cggggtggAAAAATATCAGGGGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGt                                                                                             <  2:1520773/285‑1 (MQ=255)
                                                                                                                                                                            cGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCa                                                                                                                                                                  <  2:1388246/219‑1 (MQ=255)
                                                                                                                                                                            cGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGt                                                                                             <  1:1881928/288‑1 (MQ=255)
                                                                                                                                                                            cGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGt                                                                                             <  2:1635220/288‑1 (MQ=255)
                                                                                                                                                                             gtggtgGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTGCGAAGAGGCGGttt                                                                                           >  1:531339/1‑289 (MQ=255)
                                                                                                                                                                               ggtggAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATa                                                                                                                              >  1:114385/1‑252 (MQ=255)
                                                                                                                                                                                  ggAACAATTTCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTAt                                                                                       <  2:874703/288‑1 (MQ=255)
                                                                                                                                                                                         tatCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑c                                                                               >  1:1864848/1‑288 (MQ=255)
                                                                                                                                                                                          atCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑Ca                                                                              >  1:142185/1‑288 (MQ=255)
                                                                                                                                                                                          atCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CAc                                                                             <  1:370326/289‑1 (MQ=255)
                                                                                                                                                                                           tCAGGCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCAc                                                                                                                                                                                                                              >  2:2328790/1‑144 (MQ=255)
                                                                                                                                                                                            cacgCGGGAATGGATTGGGTACCTGCT‑TGCATGACCGCGTACCTGACGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGCACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACcg                                                                           <  1:1064047/286‑1 (MQ=255)
                                                                                                                                                                                              ggCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAg                                                                                   >  1:503996/1‑280 (MQ=255)
                                                                                                                                                                                              ggCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGGCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTgcg                                                                                                                                                                           <  2:2211278/192‑1 (MQ=255)
                                                                                                                                                                                               gCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCCTTGGCGCTGTTGGATACGCCGCAATTCAGTAATCCTTCGAAAAGTCCGTTTGTATCaacacccccccg                                                                          >  2:1567618/1‑278 (MQ=255)
                                                                                                                                                                                               gCGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACcgcg                                                                         <  2:1555496/288‑1 (MQ=255)
                                                                                                                                                                                                cGGGCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACcgc                                                                          <  1:322507/286‑1 (MQ=255)
                                                                                                                                                                                                   gCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCa                                                                                                                                                                                                      >  1:1117048/1‑160 (MQ=255)
                                                                                                                                                                                                   gCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGgcg                                                                                                                                        >  2:738381/1‑222 (MQ=255)
                                                                                                                                                                                                   gCATTGATTGGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGAGCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCCGGCAATATTGCTGGCGCAAAACATTGATCACTTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGCTTCATTGGCGCTGTGGGATACGCCGCAACTCAGGTATCACTCGATGAGGCGGTTTGTATGCATAT‑CACCGCGCTGAt                                                                    >  2:384347/1‑289 (MQ=255)
                                                                                                                                                                                                      ttgattgGGTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGc                                                                 <  1:2418763/289‑1 (MQ=255)
                                                                                                                                                                                                             ggTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCTTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGGTTCATTGGCGCTGTGGTATACGCCGTAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGGTCCACCGC‑CTGCTGGCGAACGTg                                                          >  2:1876615/1‑289 (MQ=255)
                                                                                                                                                                                                             ggTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTg                                                          >  1:1920865/1‑289 (MQ=255)
                                                                                                                                                                                                             ggTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTg                                                          >  1:1241326/1‑289 (MQ=255)
                                                                                                                                                                                                             ggTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCGGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAAGCCTTCGAAGAGGCGGTTTGTATCCAGTA‑CACCGCGCTGATGGCGTACGTg                                                          >  2:659455/1‑289 (MQ=255)
                                                                                                                                                                                                              gTTCCTACT‑TCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTgg                                                         >  1:42736/1‑289 (MQ=255)
                                                                                                                                                                                                              gTTCCTACG‑TGGTTGACCGCGGATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTg                                                          <  2:42736/288‑1 (MQ=255)
                                                                                                                                                                                                                 tcctacttcggtGACCGCGTATCGGGGGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGGTCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGgcg                                                       <  1:1791803/278‑1 (MQ=255)
                                                                                                                                                                                                                  cctacttcgaTGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATg                                                                   >  2:1847186/10‑276 (MQ=255)
                                                                                                                                                                                                                     acttcgaTGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTg                                                                                                                                                                    >  1:2010983/7‑177 (MQ=255)
                                                                                                                                                                                                                        tcgaTGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCACAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGaa                                                                                                     <  1:1896298/234‑1 (MQ=255)
                                                                                                                                                                                                                         cgaTGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCa                                                                                                                                                             <  2:800822/178‑1 (MQ=255)
                                                                                                                                                                                                                                cgcgTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTg                                                                                                                                           >  1:1567228/1‑191 (MQ=255)
                                                                                                                                                                                                                                cgcgTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGAGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTgg                                                                                                                                          >  2:1077012/1‑192 (MQ=255)
                                                                                                                                                                                                                                 gcgTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCAcc                                                                                                                                                                                   <  1:1813393/150‑1 (MQ=255)
                                                                                                                                                                                                                                  cgTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGGGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGACGAGGCGGTTTGTATCAAGAT‑CACCCCGCTGATGGAGAACGGTGGGCTGCTTGTTCCGCTatt                                      >  1:2385161/1‑287 (MQ=255)
                                                                                                                                                                                                                                   gTAGCTGGCGGGCGGGATGTTTTTACACTGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACt                                      <  1:218842/288‑1 (MQ=255)
                                                                                                                                                                                                                                      tCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGt                                  <  1:659455/289‑1 (MQ=255)
                                                                                                                                                                                                                                          gcgggcggGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGTGATACGCCGCAATTCAGGAATTCCTCGAAGAGGCGGTTTGTATCAAGAT‑CCCCGCGCTGATGGCGAACCTGGCGCTGTGTTCTCCGCtttttg                                    >  2:2672258/1‑278 (MQ=255)
                                                                                                                                                                                                                                               cgggATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGAGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTCGGATACGCCGACATTAAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGAGAACGTGGCCATGATGGCTCCGGTACTTGGTACGCtggtg                         >  1:1314745/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    tGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGgcg                     <  2:695250/288‑1 (MQ=255)
                                                                                                                                                                                                                                                    tGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGgcg                     <  1:1615890/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttttACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCgcggc                 <  1:909967/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              aTGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATa                                                                                                                                                           <  1:1196491/145‑1 (MQ=255)
                                                                                                                                                                                                                                                              aTGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATa                                                                                                                                                           <  2:2428780/145‑1 (MQ=255)
                                                                                                                                                                                                                                                              aTGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATa                                                                                                                                                           >  2:1196491/1‑145 (MQ=255)
                                                                                                                                                                                                                                                                ggCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGAt                                                  <  1:2632822/247‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ctgGGGCCGGTGTCGGATCGTATTGGTGGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGACCGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCAtgtg    <  2:1225374/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tgGGTCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGtgct  <  1:54504/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tgGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGATTGCt                                              >  2:772681/1‑245 (MQ=255)
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                     
TGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTAGTACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACT‑AGCATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGAGCGATCGTATTGGTCGCCGTCCGGTGATGC‑TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGAT‑CACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCT  >  CP042583/746520‑747069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A