Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,923,397 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,923,3970GC99.7% 859.4 / NA 362intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (189/171);  minor base T (1/0);  total (191/171)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,923,3980CG99.7% 860.1 / NA 362intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (190/171);  total (191/171)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,923,3990TA100.0% 869.8 / NA 362intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (191/171);  total (191/171)

Only 100 of 362 total aligned reads displayed.

GGAATACCACCACCGACGTTGTGCGCACAGTTCCACACACTCACAATGCCGCCACGTTCTTTCTGGCTCCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTGCTCGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTGCTGCGATCGCTTACGCTACCCATGATGAATTTGCTAAATCCATAAGCAATGCTGATCCCGCTAAG‑GGCAAAACCTAAATCACCGCGACTGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTATTTATGATTAACAGCCT  >  CP042583/1923119‑1923677
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
cgacaacccccaccGACGGGGTGCGCACAATTCACCACCGACACCAGGCCGCCACGTTCTTTCTGCGACAACCAGTGGACCATAGTCCGCCCACCCGGCGGCCACAC‑CAACCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCAt                                                                                                                                                                                                                                                                                  <  2:1049639/284‑1 (MQ=255)
  aaTACCACCACCGACGTTGTGCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATa                                                                                                                                                                                                                                                                                 <  1:1286477/288‑1 (MQ=255)
       caccaccGACGTTGTGCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCaa                                                                                                                                                                                                                                                                            >  1:565452/1‑288 (MQ=255)
                      gcgcACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATccccgaaag                                                                                                                                                                                                                                                            >  1:2683938/1‑283 (MQ=255)
                               tccaccctgcaacaATGCCGCCACGTTCTTTCTGCGACCACCAGTGGACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCaaa                                                                                                                                                                                                                                                     <  2:1202565/275‑1 (MQ=255)
                                        acacaATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGCATCACACCTGCGGGCAGGAAAACGCGCGGATCCGAGCGATCCGATACCGCACCCATGATGAATTTCGAAAATCCATACGCAATCGAGATCCCCGCAAG‑GCCAACACTCAAATcctt                                                                                                                                                                                                                                         >  2:59823/2‑286 (MQ=255)
                                        acacaATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCtctgtccct                                                                                                                                                                                                                                         >  1:836110/2‑281 (MQ=255)
                                        acacaATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCAcc                                                                                                                                                                                                                                         >  1:400182/2‑289 (MQ=255)
                                        acacaATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCAc                                                                                                                                                                                                                                          >  1:1389103/2‑288 (MQ=255)
                                        acacaATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCAc                                                                                                                                                                                                                                          >  2:246767/2‑288 (MQ=255)
                                        acacaATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGAGACCGAACCCATGATGAATTCCGAAAATCCATAAGCAATCGAAATCCCCGAAAG‑GACAAAACCTaaacaac                                                                                                                                                                                                                                          >  2:1230684/2‑284 (MQ=255)
                                                  gccACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACcgcgtgagaat                                                                                                                                                                                                                               <  1:1906187/289‑8 (MQ=255)
                                                       gTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTg                                                                                                                                                                                                                          <  1:2129149/289‑1 (MQ=255)
                                                                      accaGTGACCCAAAGTACGACCACACGGCGGCCACCC‑CAACCCCTGGAACCAACCGCAGAGGAAAAACAGTACAAACATCACCGCAAGGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACTAGATAAgg                                                                                                                                                                                                           <  2:1286845/289‑1 (MQ=255)
                                                                                  tAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAgcgc                                                                                                                                                                                               <  1:2405837/289‑1 (MQ=255)
                                                                                  tAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAgccc                                                                                                                                                                                               >  2:1645869/1‑287 (MQ=255)
                                                                                  tAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCCCaa                                                                                                                                                                                                                     >  2:966419/1‑267 (MQ=255)
                                                                                     tACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCaaa                                                                                                                                                                                            >  1:1159403/1‑289 (MQ=255)
                                                                                     tACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCCCAACCAGATAAGGCATAGCAAGAGCaaa                                                                                                                                                                                            >  2:155061/1‑289 (MQ=255)
                                                                                          ccACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAgg                                                                                                                                                                                                           >  1:603751/1‑269 (MQ=255)
                                                                                          ccACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCCCAACCAGAt                                                                                                                                                                                                               >  2:1474811/1‑265 (MQ=255)
                                                                                          ccACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAAACTAAATCACCGCGTGAGAATCCCTGCCCAACCAGATAAGGCATAGCAAGCGCAAAGGTCt                                                                                                                                                                                       >  1:1923652/1‑289 (MQ=255)
                                                                                             cacGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAAGAACAGTACAAACATCACCGCAATGCTCGACGTCCCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGTGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAAATTCGAAAATCCATAAGCAATCGAGATCCCAGAAAT‑GGCAAAACCTAAATCACCGCGAGAGAATCCGTCACCACCCAGATAATGAAGAGCAAGCCCAAAGTACTTaa                                                                                                                                                                                    >  2:363632/1‑288 (MQ=255)
                                                                                             cacGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCTCACTGCTCGACGTCGCCCATTGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGACTCGAGCGATCCGATACCGAACCCATGATGAATATAGAAAATCCATAAGCAATCGAGA‑ACCACGAAGTGACAAAAACTAAAAAACCGCGGGCAAATACCAACTCAACCAAATAACGCATAGCaaaccgaaaatctata                                                                                                                                                                                     >  2:2600336/1‑274 (MQ=255)
                                                                                             cacGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACcgcgtgagaatc                                                                                                                                                                                                                              >  2:442761/1‑239 (MQ=255)
                                                                                             cacGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACcgcgtgagaatc                                                                                                                                                                                                                              <  1:442761/247‑9 (MQ=255)
                                                                                             cacGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTAc                                                                                                                                                                                    >  2:2159208/1‑289 (MQ=255)
                                                                                             cacGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCCGCTCAACCAGATAAGGCATAGCAAGCGCAAAGGTCATAc                                                                                                                                                                                    >  2:88681/1‑289 (MQ=255)
                                                                                               cggcggCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAACG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCCGCCCAACCAGAAAAGTCAGAGCAAGCGCAAACTTCTTActc                                                                                                                                                                                  >  2:1877519/1‑287 (MQ=255)
                                                                                                  cggcCACCC‑AACCCCCGGGAACAAACCGCAGAGGAACAAAAGTACAAACATCACCGAAATGCTCGACGTCGCCCATGGCAAAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAAcc                                                                                                                                                                               <  1:1035506/289‑1 (MQ=255)
                                                                                                    gcCACCCACCTCCACTAGAACACACCGCAGGAGAACAAAAGTACAAACATCCACGAGATGCTCGACATCGGCCATGGCACAAAGCCCATAAAACACATCACTGCCGACGCCAGAAGCAAAGCTGCCGGCAGGGAAACGCGCGAATTCGAGAGATCCGATACCGAACCCATGATGAAGTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAAGCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAAcc                                                                                                                                                                               <  2:1785717/288‑1 (MQ=255)
                                                                                                    gcCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAAcc                                                                                                                                                                               <  1:2489970/287‑1 (MQ=255)
                                                                                                        ccc‑cATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAg                                                                                                                                                                         >  1:318060/1‑289 (MQ=255)
                                                                                                             aTCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGAt                                                                                                                                                                                                               >  2:1327203/1‑247 (MQ=255)
                                                                                                             aTCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGAt                                                                                                                                                                                                               <  1:1327203/247‑1 (MQ=255)
                                                                                                             aTCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTaa                                                                                                                                                                      >  2:333830/1‑288 (MQ=255)
                                                                                                                  cTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCa                                                                                                                                                                <  1:1647006/289‑1 (MQ=255)
                                                                                                                     gAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATa                                                                                                                                                              >  2:545099/1‑288 (MQ=255)
                                                                                                                        ccaaccGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGGATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCa                                                                                                                                                          >  1:1567270/1‑289 (MQ=255)
                                                                                                                           accGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATAGAGACCCCCGAAAG‑GGCACAACCAAAACAAACGCGTGAGAATGCCTGCCCAACCAGATAAGGAATAGCAAGGGCAAAGGTATTGACCACC‑AACAGGAAGCCGcaaagacaaaga                                                                                                                                                      >  2:2384459/1‑289 (MQ=255)
                                                                                                                                       caacaGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAg                                                                                                                                                                     <  1:975056/263‑1 (MQ=255)
                                                                                                                                       caacaGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCAAAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCCCAACCAGATAAGGCAAAGCAAGCGCAAAGTTCTTACGAAACAAATAGTAAGCCGCATAGCCAAAGAATAACCACAgg                                                                                                                                           >  2:1729370/1‑289 (MQ=255)
                                                                                                                                            gTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCa                                                                                                                                                                >  2:1412457/1‑263 (MQ=255)
                                                                                                                                             tACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAAtt                                                                                                                                     >  1:492480/1‑289 (MQ=255)
                                                                                                                                              aCAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCTAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCaa                                                                                                                                                                                                                     <  2:523332/208‑1 (MQ=255)
                                                                                                                                               cAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGAt                                                                                                                                                                                                               >  1:919044/1‑213 (MQ=255)
                                                                                                                                               cAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCAt                                                                                                                                                               >  2:1556658/1‑261 (MQ=255)
                                                                                                                                                  aCATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGa                                                                                                                                                                                                                >  2:1277006/1‑209 (MQ=255)
                                                                                                                                                       aCCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCa                                                                                                                                                                <  1:215112/252‑1 (MQ=255)
                                                                                                                                                       aCCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCa                                                                                                                           >  1:227515/1‑289 (MQ=255)
                                                                                                                                                       aCCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCa                                                                                                                           >  2:2738705/1‑289 (MQ=255)
                                                                                                                                                         cGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAAt                                                                                                                         <  2:755967/289‑1 (MQ=255)
                                                                                                                                                                ctcgacgtcgCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAAcc                                                                                                                                                                               >  1:194104/6‑228 (MQ=255)
                                                                                                                                                                        cgCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGTGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAg                                                                                                                                                                                           >  2:2544910/1‑208 (MQ=255)
                                                                                                                                                                        cgCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCa                                                                                                                                                                >  2:849815/1‑235 (MQ=255)
                                                                                                                                                                                 cacaAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGAtctc                                                                                                  <  1:2713406/288‑1 (MQ=255)
                                                                                                                                                                                         ccATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAgg                                                                                         >  1:1514859/1‑289 (MQ=255)
                                                                                                                                                                                         ccATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAg                                                                                          <  1:541101/288‑1 (MQ=255)
                                                                                                                                                                                           aTAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTa                                                                                       <  1:333830/289‑1 (MQ=255)
                                                                                                                                                                                           aTAAACAACATCACTGCCGCAGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTa                                                                                       >  1:298845/1‑289 (MQ=255)
                                                                                                                                                                                                  acaTCACTGCCGCCGCCCGAAACAAACCTGCGGGAAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAA‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAg‑cgcgc                                                                               <  2:298845/289‑1 (MQ=255)
                                                                                                                                                                                                   caTCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCt                                                                              <  1:2042385/289‑1 (MQ=255)
                                                                                                                                                                                                       ccTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCt                                                                              <  1:879809/284‑1 (MQ=255)
                                                                                                                                                                                                        cTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGcc                                                                                                                                                           <  1:1987230/208‑1 (MQ=255)
                                                                                                                                                                                                             gccgccAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGaa                                                                                                                                                                                 <  1:2183567/181‑1 (MQ=255)
                                                                                                                                                                                                              ccgccAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGgcgc                                                                   <  1:1419933/289‑1 (MQ=255)
                                                                                                                                                                                                              ccgccAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGgcgc                                                                   <  1:1262996/289‑1 (MQ=255)
                                                                                                                                                                                                              ccgccAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGgcgc                                                                   <  1:208829/289‑1 (MQ=255)
                                                                                                                                                                                                              ccgccAGAATCAAACCTGCCGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAACTCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGgcgc                                                                   <  2:80475/289‑1 (MQ=255)
                                                                                                                                                                                                              cagccAGAATCAATCCTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGgcgc                                                                   <  1:2600336/287‑1 (MQ=255)
                                                                                                                                                                                                                            ccTGCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATAc                                                     <  1:2332989/289‑1 (MQ=255)
                                                                                                                                                                                                                             cTGGGGGCAGGAAAACGCGCGGATTCCAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCAAAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACt                                                    <  1:1358194/289‑1 (MQ=255)
                                                                                                                                                                                                                              cgCGGGCCGGAAAACGCGCGGATTCGAGTGATCCGATACCGAACCCATGATGAATTTCGAAAAGCCATAAGCAACCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTc                                                   <  2:318060/288‑1 (MQ=255)
                                                                                                                                                                                                                               gCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCCCCGCGGCAGGTAAGCCGCGC‑TTGTGTTGCGCTGGGTTAAAAATCCTCa                                                  >  2:2332989/1‑289 (MQ=255)
                                                                                                                                                                                                                               gCGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAATCGGAACGAGCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCGGGGTTAAAAATaacca                                                  >  2:2412803/1‑285 (MQ=255)
                                                                                                                                                                                                                                cGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCaa                                                 >  2:928132/1‑289 (MQ=255)
                                                                                                                                                                                                                                cGGGCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTACTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCa                                                  >  1:2375003/1‑288 (MQ=255)
                                                                                                                                                                                                                                 gggCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCaa                                                 <  1:155435/288‑1 (MQ=255)
                                                                                                                                                                                                                                 gggCAGGAAAACGCGCGGATTCGAGCGATCCGATACCGAACCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCaa                                                 <  2:2196668/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             tccgataccgaaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAg‑c                                                                                   >  2:1386264/12‑226 (MQ=255)
                                                                                                                                                                                                                                                             tccgataccgaaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCaa                                                 >  1:1023701/12‑260 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTTAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGgcgc                                                                   <  1:94818/231‑1 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACg                                                                                                                                                                                   >  2:1925451/2‑121 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAat                                                                                                                                                    >  2:1847104/2‑152 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAat                                                                                                                                                    <  1:1847104/151‑1 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTc                                                   <  1:121677/247‑1 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGccc                            >  1:762071/2‑271 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGc                              >  1:853179/2‑269 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGt                          >  1:581722/2‑273 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCttatttat              >  1:703760/2‑285 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCttat                  >  2:2142321/2‑281 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCt                     >  1:1437208/2‑278 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTATTTATGAtt          >  1:1742093/2‑289 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTATTTATGAtt          >  2:6873/2‑289 (MQ=255)
                                                                                                                                                                                                                                                                       aaCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTATTTATGAtt          >  1:1301963/2‑289 (MQ=255)
                                                                                                                                                                                                                                                                        aCCCATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCTCGTGGTCTTATTTATGATTa         <  1:2459350/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cccATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTATTTATGATTaa        <  2:2175063/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cccATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTATTTATGATTaa        <  2:1969383/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cccATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCCGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTGATTTATGATTa         >  2:2039818/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         cccATGATGAATTTCGAAAATCCATAAGCAATCGAGATCCCAGAAAG‑GGCAAAACCTAAATCACCGCGTGAGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTATTTATGATTaa        <  2:2683938/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
GGAATACCACCACCGACGTTGTGCGCACAGTTCCACACACTCACAATGCCGCCACGTTCTTTCTGGCTCCACCAGTGCACCATAGTACGACCACACGGCGGCCACCC‑CATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTGCTCGTCGCCCATGGCACAAAGCCCATAAACAACATCACTGCCGCCGCCAGAATCAAACCTGCGGGCAGGAAAACGCGCGGATTGCTGCGATCGCTTACGCTACCCATGATGAATTTGCTAAATCCATAAGCAATGCTGATCCCGCTAAG‑GGCAAAACCTAAATCACCGCGACTGAATCCCTGCTCAACCAGATAAGGCATAGCAAGCGCAAAGTTCTTACGAACCAAATAGTAAGCCGCATAGCCAAAGAATATCCCCAGGAAAATTTGCCAGCGCAATCGACGATAAGTCGGATCGATCTCCGCGGCAGGTAAG‑CGCGCTTTGTGTGGCGCTGGTTTAAAAATACTCAACATTGATAGCCTCCGTGGCCCGTGGTCTTATTTATGATTAACAGCCT  >  CP042583/1923119‑1923677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A