Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A23 F0 I0 R1
|
20 |
203.6 |
4017998 |
92.9% |
3732720 |
250.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,560,455:1 |
+G |
100% |
intergenic (‑2/+1) |
glpR ← / ← glpR |
pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,560,455 | 1 | . | G | 95.2%
| 686.2
/ 14.4
| 207 | intergenic (‑2/+1) | glpR/glpR | pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base G (96/97); total (102/105) |
| Fisher's exact test for biased strand distribution p-value = 7.48e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
Only 100 of 215 total aligned reads displayed.
TAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑C‑CA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGCTCCGTTCGCCATCGACATCCCAAACAAATCAAA > NC_000913/3560175‑3560729
|
atttCGCCACCGGCGAGAATGAGGCGAAAATCTTCTTTTACCATCAACGGTGTGGAAACGTGGAGATGGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑cg < 2:1761793/279‑2 (MQ=255)
aaTTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGGGTTGGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑cg < 2:1775757/281‑2 (MQ=255)
ccACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGGGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATc < 2:946258/282‑1 (MQ=255)
ccACCGGCGAGAATGATGCGAAAATCTTCTGTGACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAAGTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATc < 1:1236074/282‑1 (MQ=255)
cACCGGCGAGAATGATGCGAAAATCTTCTTTTACCAACAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATCAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGAGGCGCTCTTTTTCTTCGGTC‑TGGGTGGGCTTGCGATCGTGGCACGGCGTGTTAACCGACCTGGAAGGCAGCGACGCACCGCCCTGAT‑G‑G‑C‑GACGGATCa > 2:1228027/1‑282 (MQ=255)
agaATGATGCGAAAATTCTCTTTTACGATCAACGTGTTAGCAACGTTGGTATTGTTGGTTGAAATGCGCAAAGTGCTGTGAGTGAGCAGTGGGTGCGCGACCGGTTCCGGGGTGGTGCCGTTATCGATAAACAGCGTCGGGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCGTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGc < 2:697218/282‑1 (MQ=255)
gatgCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCg < 1:212477/281‑1 (MQ=255)
tgCGAAAATCTTCTTTTACCATCCACGTGTTAGCAACGTTGAGATTGTTAGTGACAATGCGCAAATCGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGAAATCGGTAGACAGCGTCGAGCCATTGGGGGTTTGCT‑CTGCCACTTTGCGGGCGATGCGCTATTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCAACGGCGTGTTAACCGAACTGGAAGGCGGCGCGGCACCGCACTGAT‑G‑G‑CGCA‑GGATCAGTGTTNTNNCCNGca > 2:1420988/1‑281 (MQ=255)
tgCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGAGTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGCTAAACAGCGTCGAGCCATGGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGTTC‑TGGATGGCCTTTCGATCGTGCAACGGAGTGTTAACCGAACTGGAAGGCGGAGCCGCACCGCCATGCT‑G‑G‑CGAA‑GGGTAGG‑GTTTTGCTCCCCCa > 2:221782/1‑282 (MQ=255)
cGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGCGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAg > 1:521364/1‑281 (MQ=255)
cGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGa > 1:450154/1‑282 (MQ=255)
ttGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCCTGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACg > 1:1593347/1‑282 (MQ=255)
tGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGGTTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACg > 1:1762628/1‑281 (MQ=255)
tGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGAGGCGCTCTTTTTCCTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGCA‑G‑G‑CGCA‑GGAACAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCCAATAGTctggcggctggcgg > 2:850435/1‑282 (MQ=255)
agaTTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGACCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGCCTGCGGGCTGACGga > 1:1807289/1‑281 (MQ=255)
gttgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTc > 2:1021113/1‑249 (MQ=255)
gttgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGAGACGCACCGCCATGAT‑G‑G‑CGCA‑GGATCCG‑GTTTTGCTCCGACAGCCCATTGAGGTCTTGGCGAATAGTCTGCGGGCGGACGGAGAAATg > 2:1183806/1‑282 (MQ=255)
ttgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGc > 1:994019/1‑282 (MQ=255)
gACAATGCGGAAATTGCTGTGGTTGAGGAGGGCGTGCGCTACCGCTTCCGGCTGGGGGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTAc < 2:908472/282‑1 (MQ=255)
gACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGACGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCACCTCATTGAGGTCGCGGCGAATCGTTCGCGGGCTACAGGACAACTGCTCTAc > 2:1060833/1‑282 (MQ=255)
caagccgcAAATTGCTGTGATGGAGCAGTGGGTGCGCTACTGCTGCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGc < 1:1692285/270‑1 (MQ=255)
aattggcAAAGTGGTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGAGAAACGGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAg < 2:427314/277‑1 (MQ=255)
tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCC‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCCGGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGcc > 2:1876388/1‑281 (MQ=255)
tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGct > 1:427314/1‑282 (MQ=255)
tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGAGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGATCTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGAA‑GGATCAG‑ACTTTGCACCGCAGGCCCATTGAGCTCGCGGCGCATATTCTGCGGGCTGACGGCGCAATCCTTTACCAGct > 2:67283/1‑282 (MQ=255)
cAAATTGCTGTGATTGAGCATTGCTTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCTTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCtt < 1:506039/281‑1 (MQ=255)
ttGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTa < 1:112823/282‑1 (MQ=255)
gCTGTGTTTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTAc < 1:1013496/281‑1 (MQ=255)
gCTGTGACTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTAc < 1:1362234/281‑1 (MQ=255)
tgATTGAGCAGTGCGTGCGCTACCGCTGCCGGCGTGGTGCCGATATCGATAAACAGCGTCGTGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTGTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCTCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACa < 1:1343214/282‑1 (MQ=255)
gacgtggttgcgTTACCGCTCCCGGCGTGGTGCCGAGATCGATAAACAGCGTGAGGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCCCGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCct < 2:1376960/274‑1 (MQ=255)
cggggcgtgcgCTACCGAGTCCGGCGGGGAGCCGATATCGATAAACAGCGGCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCct < 2:450154/277‑1 (MQ=255)
cAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCct < 1:384647/281‑1 (MQ=255)
cAGGGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCTATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCct < 1:670385/281‑1 (MQ=255)
gcgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTCACCGCACTTGAAGGCAGCGCCGCACCGCCATGCT‑G‑G‑CTCA‑GGACCAG‑GGTTCGCTCCGCCAGCTCCTTTAGCTCGCGGCGAATGGTCTGCGGGGAGACGGAGTACGTCTCTTCCAGATCTTCGGTTCTTGAATAACACTGCTGt > 2:1094432/1‑282 (MQ=255)
gcgtgcaCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCCCATTGAGGTCgcggc > 1:1096384/1‑217 (MQ=255)
cgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtt > 1:1916172/1‑282 (MQ=255)
cgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtt > 1:756818/1‑282 (MQ=255)
cgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtt > 1:773175/1‑282 (MQ=255)
cgtgcgCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATAGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTCTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTACGCCAGCTCATTGAGGTCGCGGCGAATAGTCGGCGGGCTGACGGATAAATGCCCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtt > 1:893429/1‑282 (MQ=255)
cgcTACCGCTTCCGGCGTGTTGCCGATATCTATAGACAGCGTCGAGCCATTGGGGATTTGCT‑CAGCCACTTTGCGGGCGTTGTGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAA‑GTTTTGCTCAGGCTGCTCATTGAAGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAAc < 1:1192983/282‑1 (MQ=255)
tACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGc < 1:654825/184‑1 (MQ=255)
acccggtCCCGCGTGGTGCCCATTTACATAAAAAGGGTTGGGCCATTTGGGATTTGCT‑CGCCCAATTTGCGGGCGATGCGCTCTCTTTCTTCGGTC‑TGGGGGGCCTTGGGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑GAG‑CA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAg < 2:1121656/275‑1 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATCTCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACCTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGCT‑G‑G‑CGCA‑GGATCAG‑GTTTCGCCCCGCCAGCTTATTGAGGTCGAGGCAAACATGCTGCGGGCTGACGGAGGAATCCTCTACAAGCCCTTCGGCTATGTCATAACCCTGCTGTTTAAACAGt > 2:188789/1‑282 (MQ=255)
aCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAg < 1:486952/281‑1 (MQ=255)
cGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑GCC‑C‑CC‑GGATCAG‑GTTTTGCTcc > 2:654825/1‑184 (MQ=255)
cTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGa > 1:1877490/1‑282 (MQ=255)
ttccgtgggagtgCAGAGATCAGTAAAAAGGGTCGTGCCATTGGGGATTGGCT‑CCGCCCGTTTGCGGGTTGTGGGCTCTTTTTCTTCGGGA‑TGGGTGGCGTTGCGATCGTGCGACGGCGTCTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑TTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTAACGGAGAAATGCTCTACCAGCTCTTCTGTACTGACATAACCCTGCTGTTTAACCAGTTCGa < 2:1678275/271‑1 (MQ=255)
gacaggtgCCGATATCGAAAAAAGGCTTCGGGCCATTGGGGATTTGGT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAc < 2:1293541/278‑1 (MQ=255)
cGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGCTCGataatcc > 1:709843/1‑279 (MQ=255)
gATATCGATAAACAGCGTCGGGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGAc < 1:269925/281‑1 (MQ=255)
atatCAATAAACATGGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGt < 1:221782/282‑1 (MQ=255)
gATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGt > 1:1293541/1‑269 (MQ=255)
acggaggcgggCCGTTTGGGCTTTTCT‑GCGCCAGGTTGCGGGCGATGCGCTCTTTTTTCTCGGTC‑GGGGGGGCCTTGCGATCGGGGCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGAGCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGTGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATGACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGtgtttgtt < 2:336309/272‑1 (MQ=255)
cAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGGC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACCGGAAGGCAGCGCGGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCct < 1:1072781/236‑1 (MQ=255)
agggtgggtccATTGGGGATTTGCT‑CCGCCACTTGGAGGGTGATGCGCTCTTTTTATTCGGTC‑TGGGTGGCCTTGCGATCGGGCCACGGCGTGTTAACCGAACTGGAAGGCATCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCGGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACGGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTc < 2:1916172/273‑1 (MQ=255)
gggtggggcaaTTGGTGATTTGCT‑CCGTCGCTTTGCGGGGGATGCGCTCTTTTTCTTGGGTC‑TGGGTGGCCTGGCGATCGTGCCACGGGGTGTTAACCGAACTGGAAGGCGGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTTCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTc < 2:380739/271‑1 (MQ=255)
gTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGataa < 1:561575/253‑1 (MQ=255)
tCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCCCTTCGGTACTGACATAAACCTGCTGTTTAACCAGTTCGATAATACCGTTTTGCCGTTGTGTTTGTTTCCtt > 2:1960487/1‑281 (MQ=255)
ctttGGGGATTTGCT‑CCGCCACTGTGAGGGCGTTGCGATCTTTTTCTTCGGTCGTGGGT‑GCCTTGCGAACGTGCCACGGCGTGTTAACCGAACTGGAAGCGAGCGCGGCACCGCCAGGAT‑G‑G‑CACA‑AGATCAG‑GTTTTGCTCGGCCAGATTCTTGAGGTCTCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACAAAACCCTGCTGTTTAACCAGTTCGATAATATCGTGGTGACGTTGTGTTTGTTTCATTtata < 2:521364/277‑1 (MQ=255)
cATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTtata < 1:956634/279‑1 (MQ=255)
cATTGGGGATTTGCT‑CCGCCACTGTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATaa < 1:1114326/280‑1 (MQ=255)
ttGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑cg > 1:1485861/1‑121 (MQ=255)
ttGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAc < 2:917697/247‑1 (MQ=255)
ttGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAc > 1:917697/1‑247 (MQ=255)
ttGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTCAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGTTCAG‑GTTTTGCTCCGCCAGCCCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGAAGGAGAACTGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATaaac > 1:413269/1‑279 (MQ=255)
tGGTGATTTGCTCCCGCCA‑TTTGCGGGCGATGCGCTCTTTTTGTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATccc < 2:1509995/282‑1 (MQ=255)
gtggATTTGCC‑CCGCCACTTTGGGGCGGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGGGCCACGGCGTGTTAACCAACCTGGAAGGCAGCGCCGAACCGCCATGAT‑G‑G‑CGCA‑GGGTCAG‑GTTTTGCTCCGCCAGCGCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATccc < 2:563970/279‑1 (MQ=255)
tttGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTACGCCAGCTCCTTGAGGTCGCGGCGAATAGTCTGCGGGCTGCCGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATCCCGTTGGTACGTTGTGTTTGTTTCATTTTTAAATCCTTGGa > 2:1189591/1‑280 (MQ=255)
ttGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGAGGGCTGATGGAGAAATGCTCTACCAGCCCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATACTACCGTTGTGACGTTGTGTTTGTTTCTTTTATAAATCCCTGGTatt > 2:676284/1‑282 (MQ=255)
ccACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAACTCCCTGGAATTAttttcg > 1:318602/1‑281 (MQ=255)
ttGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttcgttttcg > 1:1864739/1‑282 (MQ=255)
aTGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCTCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGCAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGCTGTGACGATGTGTTTGTTTCATTTATTCATCCCTGGAATTATTTTCGTTTTCGCGCATTGAg > 1:1959397/1‑282 (MQ=255)
tcGGGC‑TGGGTGGCCTGGCGATCGGGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTtata < 2:260373/232‑1 (MQ=255)
cGGTT‑TTGGTGTCCTTGCGATCGTGGCCCGGTGAGTTAACCGAACTGTGAGGCAGCGCCGCACCGCCATGATGG‑G‑G‑CA‑GGTTCAG‑GTTTTGCTCCGGCAGCTCATTGAGGTCGCAGCGGATAGTCTGTGGGCTGACGGAGAAATGCTCTACCAGCGCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGcc < 2:1364310/282‑1 (MQ=255)
cGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGGTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGcc < 1:676284/282‑1 (MQ=255)
cGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATc > 1:240300/1‑272 (MQ=255)
cGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GGTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTAGCTAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGcc > 1:1703360/1‑282 (MQ=255)
gTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCg < 2:944724/94‑1 (MQ=255)
gTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCg > 1:944724/1‑94 (MQ=255)
ccTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAAt > 2:777397/1‑109 (MQ=255)
cTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAg < 2:1767878/141‑1 (MQ=255)
cTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAg > 1:276503/1‑177 (MQ=255)
ggATTGTGCCACTGGGTGTTGACCGAACTGGAAGGCAGCGCCGCACCGCCATGAG‑G‑G‑CGCA‑GGGTCGG‑GTTTTGCTCCGCCAGGTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGGGAAATGCTCTACCAGCTCTTCGGGACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGGTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGc < 2:1864739/281‑1 (MQ=255)
cGATCGTGCCGCGGCGGGTTTACCAAACTGAAAGGCAGCGCCCCCCCGCCATGGT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGAGGCGAATAGTCTGCGGGCTGACTGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGc < 2:1755236/282‑1 (MQ=255)
aCGGCGTTTTAGCCGAACTGGAAGGCGTCGCCGCACCGCCATGATGG‑G‑G‑AA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTTGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGc < 2:1660497/281‑1 (MQ=255)
cGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGa < 1:850435/282‑1 (MQ=255)
gCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCCTTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAAAAAAAGCCATGGATAAACCCACGGCCAAccctggcat > 2:768001/1‑275 (MQ=255)
gCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGAt > 1:141925/1‑281 (MQ=255)
cGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGCTCCg > 1:870132/1‑281 (MQ=255)
gAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCg < 2:1391362/120‑1 (MQ=255)
gAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCg > 1:1391362/1‑120 (MQ=255)
gAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAc > 2:1625490/1‑262 (MQ=255)
gAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAc < 1:1625490/262‑1 (MQ=255)
aCTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACACTGCTGTTTAACCAGTTCGATCATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTTCTCCGTTc > 1:1152835/1‑281 (MQ=255)
aGCGCCGCACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGCTCCGTTCGCCACCGACac > 2:889268/1‑281 (MQ=255)
ccgcACCGCCATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGCTCCGTTCGCCATCGACATccc > 1:588375/1‑281 (MQ=255)
ggcccGCCATGAT‑G‑G‑CGCG‑GGATCAG‑GTTTTGCGCCGCCAGCTCATTGGGGTCGCTGCGAATAGTCTCCGGGCTGACGGGGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTATTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGCTCCGTTCGCCATCGACATCCcaa < 2:588375/278‑1 (MQ=255)
ccATGAT‑G‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGCTCCGTTCGCCATCGACATCCCAAACAAAt > 1:1788154/1‑281 (MQ=255)
tgat‑g‑G‑CGCA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGCTCCGTTCGCCATCGACATCCCAAACAAATCaaa > 1:1371499/1‑282 (MQ=255)
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TAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCT‑CCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTC‑TGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGAT‑G‑G‑C‑CA‑GGATCAG‑GTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGCTCCGTTCGCCATCGACATCCCAAACAAATCAAA > NC_000913/3560175‑3560729
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A