Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 11 114.9 2145065 94.8% 2033521 261.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,173,363 Δ2 bp intergenic (‑1/+1) gatC ← / ← gatC pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC/pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,173,3610C.95.6% 359.7 / 8.4 90pseudogene (2/442 nt)gatCpseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC
Reads supporting (aligned to +/- strand):  ref base C (3/1);  new base . (40/46);  total (43/47)
Fisher's exact test for biased strand distribution p-value = 3.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.17e-01
*NC_0009132,173,3620C.96.6% 359.7 / 5.1 90pseudogene (1/442 nt)gatCpseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base . (40/46);  total (43/47)
Fisher's exact test for biased strand distribution p-value = 6.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.68e-01

TTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTCGCCAAATGGACCAAAT  >  NC_000913/2173088‑2173628
                                                                                                                                                                                                                                                                                    ||                                                                                                                                                                                                                                                                          
ttGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACCCA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATa‑ccac                                                                                                                                                                                                                                                                             >  1:257000/1‑274 (MQ=255)
 tgcagtcaccaTACCCCCGGCTTGTAGCGCCCCAGGAGTAGCCGGCAGTTGGGTGTGCAAAGCAATAGTTTGCGTCGCGATCCACAGGGGGA‑TGCTCCGAATGAGAACACCCGAGATTAAGGTGCGGAACCGATTTCCACTATGGACGGCGACCGCCATCGCCACGAAGAAGCAGATGGTGGCAAGATCGCCAAACGGCAGCACCTGAGGACCCGGCACACA‑AACTGCAATTAAAATGGGGATTGGGATAAAAATCAGGCTTGCCGATa‑ccgccg                                                                                                                                                                                                                                                                           <  2:196035/269‑2 (MQ=255)
    cgCCCCCCTACCCCCGGCTTTTAACGCCCCAGCATTAGCCTCCAGTTGGGGGTGCAAACCATTAGTTTGCGACGCAATCCACAGGGGGA‑TGCCCATAATGAAGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATa‑ccaccgccg                                                                                                                                                                                                                                                                        <  2:328611/274‑5 (MQ=255)
     gCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGCTTTCCACGATGCACGGCGACCGCCATCGCCACGACGAAGCCGACGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATCCACATGGTTAGTGGGATAAAAACCAGGCTGCCCTATACCCACCccgt                                                                                                                                                                                                                                                                        >  2:694491/1‑274 (MQ=255)
     gCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGAATAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGAAAGATCGCCAAACGGCAGCACCTGATTACCCGGACCACA‑AACAGCAATTCAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATa‑ccaccgccgt                                                                                                                                                                                                                                                                       >  1:611833/1‑270 (MQ=255)
                   ggCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGACACGAAGACGCCCATGGTGGCAAGATCGCCAAACGGCAGCACCCTATTACCCGGCA‑ACACAACAGCAATTAAAATGGAGCGCGGGAAAAAAATCAGGCTTGCCGAT‑‑‑CACACCACCGTATGTCccaccacg                                                                                                                                                                                                                                                        >  2:112382/1‑272 (MQ=255)
                    gCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTCCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCCAGATCGCCAAACGGCAGCACCCGATTACCCGGCACACA‑CACAGCAATTAAAATGGTGAGTGGGTAAAAAAACAGGCTTGCCGCAA‑CCA‑‑CCGCCGGATGTCCcagaaaca                                                                                                                                                                                                                                                       >  2:521228/1‑269 (MQ=255)
                       tttAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATa‑ccac                                                                                                                                                                                                                                                                             <  2:933940/251‑1 (MQ=255)
                             gCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATc                                                                                                                                                                                                                                             <  1:713869/275‑1 (MQ=255)
                               cccAGCATTTGCCGCCGGTTGGGTGTGCAAACCAATAGTTTGGGTCGGGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGGTTAAGGTGCGGAACAGGTTTCCACGACGCACGGCGGCCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATTGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCaa                                                                                                                                                                                                                                           <  2:257000/275‑1 (MQ=255)
                                         gccgccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCa                                                                                                                                                                                                                                  >  2:126884/1‑274 (MQ=255)
                                         gccgccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGAAACGCCGGATCAAGGCCAAACa                                                                                                                                                                                                                                  >  1:555128/1‑274 (MQ=255)
                                         gccgccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACACCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGAAA‑CCA‑‑ACGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCACTCa                                                                                                                                                                                                                                  >  1:200052/1‑274 (MQ=255)
                                         gccgccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATAGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCCCACA‑AACAGCAATCAAAATGGTGAGTGGGATAACAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATTTCCCAGCAGCAACGCCGGATCAAGGCCAATCa                                                                                                                                                                                                                                  >  1:396247/1‑274 (MQ=255)
                                                   gggTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGACCAAGGCCAATCAGGAACTCCTg                                                                                                                                                                                                                        >  1:366000/1‑274 (MQ=255)
                                                       ggggcaaCCAATAATTTGCGTCGCGAGCCACAGGGTGAGTGC‑CAGTACGATGACACCCGGGATTAAGGGGCCGAACAGATTTCCCCGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAccgc                                                                                                                                                                                                                   <  2:385695/270‑1 (MQ=255)
                                                               cAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACtt                                                                                                                                                                                                            <  2:231984/274‑1 (MQ=255)
                                                                aaTAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCAGCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACtt                                                                                                                                                                                                            <  1:729416/273‑1 (MQ=255)
                                                                 aTAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGc                                                                                                                                                                                                         <  1:898810/275‑1 (MQ=255)
                                                                       tGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGCGATTAAGGTGCGGCACAGATTTCCACGATGCACGGCGACAGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCTCCAAACGGCAGCCCCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATCTCCCAGCAGCCACGCCGGACCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCCCCTGTa                                                                                                                                                                                                    >  1:788569/1‑274 (MQ=255)
                                                                       tGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTa                                                                                                                                                                                                    >  1:321751/1‑274 (MQ=255)
                                                                       ggCGTGGCGATCCACAGGGTGA‑TGCGCATAATGATGACACCCGAGATTAAGGTGCGGAACAGGTTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTaa                                                                                                                                                                                                   <  2:233725/274‑1 (MQ=255)
                                                                              cgATCCAATGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTa                                                                                                                                                                                            <  1:790724/275‑1 (MQ=255)
                                                                                    acaGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCCCACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CAGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGCCAACGacc                                                                                                                                                                                       >  2:879503/1‑272 (MQ=255)
                                                                                    acaGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGc                                                                                                                                                                                       <  1:167278/274‑1 (MQ=255)
                                                                                    acaGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGGTCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGTATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAg                                                                                                                                                                                        <  1:816499/273‑1 (MQ=255)
                                                                                    acaGGGTGA‑TGCTAATAATGATGCCAGCCAGGATTAAGGTGCGGAACAGATTTCCACGAGGAACGGCGACCGCCATCGACACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCAACTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTTGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGc                                                                                                                                                                                       <  1:521603/274‑1 (MQ=255)
                                                                                        ggTGA‑TGCTCATAATGATGACACCCGAGATGAAGGGGCGGAACAGCTTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCt                                                                                                                                                                                  <  2:513247/275‑1 (MQ=255)
                                                                                           gA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGAAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAAAGACTACGAGCCTGCCTa                                                                                                                                                                                >  1:269760/1‑274 (MQ=255)
                                                                                              tGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCg                                                                                                                                                                             >  1:646338/1‑275 (MQ=255)
                                                                                                cgcATAATGATGACACCCGAGATTAAGGTGCGGAACACATTTCCACGCTGCACGGCGACCGCCATCGCAACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCCATTAAAATGGTGAGTGGGATAAAAATCAGTCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                                                                           <  1:771073/273‑1 (MQ=255)
                                                                                                cTCATAATGATGACATCCGAGAGTAAGGTGCGGAGCAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                                                                           <  1:288284/275‑1 (MQ=255)
                                                                                                cTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                                                                           <  1:377665/275‑1 (MQ=255)
                                                                                                cTCATAATGAGGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                                                                           <  2:83561/275‑1 (MQ=255)
                                                                                                cTCAGAATGATGACACCCGAGATTAAGGTGCGGAACCGAGTGCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAAGTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                                                                           <  2:909366/275‑1 (MQ=255)
                                                                                                 tCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                                                                           <  2:321751/274‑1 (MQ=255)
                                                                                                 tCAGAATGAGGACACCCGAGATTAAGGTGGGGAACAAATTTCCAAGAGGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                                                                           <  2:708740/274‑1 (MQ=255)
                                                                                                   aTAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAg                                                                                                                                                                               >  1:708740/1‑268 (MQ=255)
                                                                                                     aaTGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCAATGGGCg                                                                                                                                                                      >  1:581947/1‑275 (MQ=255)
                                                                                                          tgaCACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAg                                                                                                                                                                               >  1:67892/1‑261 (MQ=255)
                                                                                                          tgaCACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGAATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGAGATGGGCGTTaaa                                                                                                                                                                 >  1:144739/1‑275 (MQ=255)
                                                                                                          tgaCACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGAT‑‑‑‑ACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAc                                                                                                                                                                >  1:734264/1‑275 (MQ=255)
                                                                                                            acacCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCCCCTGTAACCGACTACCAGCCTGCTTCGCGATGGGCGTTAAAcc                                                                                                                                                               >  1:305888/1‑275 (MQ=255)
                                                                                                              acCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCACTCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTCCGAGCCTGCGTAGCGATGGGCGTTAAAccct                                                                                                                                                             >  1:946224/1‑273 (MQ=255)
                                                                                                              acCCGAGATTAAGGGGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                                                                           <  2:67892/261‑1 (MQ=255)
                                                                                                                  gagaTTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAccatccat                                                                                                                                                         >  2:505392/1‑275 (MQ=255)
                                                                                                                  gagaTTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAccatcca                                                                                                                                                          >  1:271950/1‑274 (MQ=255)
                                                                                                                   agaTTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAACacatcaat                                                                                                                                                         >  2:210255/1‑274 (MQ=255)
                                                                                                                     aTTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAACCGACTACCAGCCTGCTTAGCTATGGGCGCTaaccaacacatga                                                                                                                                                       >  2:840797/1‑263 (MQ=255)
                                                                                                                     aTTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatg                                                                                                                                                        <  1:756337/273‑1 (MQ=255)
                                                                                                                                    caaTTGCCACGATGCACGGCGACCGCCATGGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAACATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCg                                                                                                                                       <  2:452653/273‑1 (MQ=255)
                                                                                                                                    aGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCAccc                                                                                                                                        <  2:271950/274‑1 (MQ=255)
                                                                                                                                    aGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGGGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCTGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCAccc                                                                                                                                        <  1:734992/274‑1 (MQ=255)
                                                                                                                                      attcccaaggggCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGGGAGTGGGATAAAAATCAGGCTGGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTg                                                                                                                                     <  2:297460/264‑1 (MQ=255)
                                                                                                                                         tCCACGATACACGGGGACCGCCAGCGCCACGAAGAAGCCGATGGTGGCAAGAGCGCCAAACGGCAGCACCTGATGACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGc                                                                                                                                   <  2:455714/274‑1 (MQ=255)
                                                                                                                                           cACGCTGCACGGCGACCGCCAGCGCCACGAAGAAGCCGATGGTGGCAAGCTCGGCAAACGGCAGCACCTGATTACCCGGCACACA‑AACACCAATTCAAATGGTGAGTGGGATACAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTCTGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGACGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGTGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCAtt                                                                                                                                <  1:435476/275‑1 (MQ=255)
                                                                                                                                           cACGATGCACGGCGACCGCCATCGCCACGAGGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCAtt                                                                                                                                <  1:5044/275‑1 (MQ=255)
                                                                                                                                           cACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTAAGAGTCTGCTTCGCGATGGGCGTTACACCATCCATGATGGGTTTAATcccctctgtcat                                                                                                                                 >  2:336721/1‑266 (MQ=255)
                                                                                                                                                  cACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAAAGCCGGATCAAGGCCAATCCGGAACTCCTGACCGCCGAACTTCGCCTGTAACCGACTACGAGCCTGCTTACCGATGGGCGATAACCCATCCATGATGGGTTTAATCCCCCGTGGCAtctttctct                                                                                                                         >  2:685093/1‑267 (MQ=255)
                                                                                                                                                      gCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATc                                                                                                                                            <  1:685093/252‑1 (MQ=255)
                                                                                                                                                          ccGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCTCCGAACTTCGCCTGTAAACGACTACGAGGCTGCTTAGCGACGGGCGTTAAACCATCCATGATGGTTTTAATCACCCCTGGCATTAGCAGCAACACTgc                                                                                                                  >  2:193224/1‑274 (MQ=255)
                                                                                                                                                          ccGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACg                                                                                                                                                                                          >  2:178297/1‑202 (MQ=255)
                                                                                                                                                          acGCCAGCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGATCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTgcc                                                                                                                 <  1:320789/274‑1 (MQ=255)
                                                                                                                                                              cATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGcc                                                                                                                                                                                      <  1:178297/202‑1 (MQ=255)
                                                                                                                                                                        aagaaaCCGATGGTGGCAAGATCGCCAAACCGCAACCACTGATTACCCGGCACACA‑AACCGCAATTCAAATGGGAAGTGGGATAAAAATCAGGCTTGCCGAT‑‑‑‑ACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc                                                                                                  <  2:734264/275‑1 (MQ=255)
                                                                                                                                                                         agacgCCGAGGGTGGCAAAATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGTTA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc                                                                                                  <  2:611833/275‑1 (MQ=255)
                                                                                                                                                                         agaagCCGCTGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc                                                                                                  <  2:1017064/275‑1 (MQ=255)
                                                                                                                                                                         agaagCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc                                                                                                  <  1:126884/275‑1 (MQ=255)
                                                                                                                                                                         agaagCCGATGATGGCAATATAGCCAAACGGCAGAAACAGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAAGCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGAAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc                                                                                                  <  1:521228/275‑1 (MQ=255)
                                                                                                                                                                         aaacgCCGAGGGTGGCAAGATGGCCAAACGGGAGCACCGGATAACCCGGCACACA‑AACAGCAATTAAAATGGTGAGGGGGATAAAAATCAGGCGTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc                                                                                                  <  2:144739/271‑1 (MQ=255)
                                                                                                                                                                           aagCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAg                                                                                                <  1:688741/275‑1 (MQ=255)
                                                                                                                                                                            gcacgagggggacAAGATGGCCAACCGGCAGCACCTGATTACGCGGCACAGA‑AACGGCAATTAAAATGGTGAAGTGGATAAAAAGCAGGCTTGCCGATA‑CCA‑‑CCGCCCTAGGTCCAGGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAg                                                                                                <  2:305888/262‑1 (MQ=255)
                                                                                                                                                                            aggcGATGGAGGCGAGATCGACAAGCGGCAGCAACTGATTCACCGGCAAACC‑AACATCGATTAAAGTGGTGAGTGGGATAAAAATCCGGCGTACCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGGTCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGc                                                                                               <  2:593301/272‑1 (MQ=255)
                                                                                                                                                                                       gCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGCTGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATacac                                                                                     >  1:849039/1‑274 (MQ=255)
                                                                                                                                                                                            aTCGCCAAACGGAAGCACCTGATTACCCGGACCACA‑AACAGCAATTAAAATGGGGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTg                                                                                <  2:366000/274‑1 (MQ=255)
                                                                                                                                                                                                    aCGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGtt                                                                                                                                                                    >  2:647579/1‑182 (MQ=255)
                                                                                                                                                                                                        cagcaCCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAc                                                                                                                                                                <  1:647579/182‑1 (MQ=255)
                                                                                                                                                                                                              cTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGa                                                             <  1:505392/275‑1 (MQ=255)
                                                                                                                                                                                                               tGATTAACCGGCACACA‑AACGGCAATGAAAATGGTGAGTGGGATAAAAATCAGGCTGGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGa                                                             <  2:478349/274‑1 (MQ=255)
                                                                                                                                                                                                                          cacaca‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACCCCTTTGCAATCTTCACCCGCGAGGTTCCCGATAATCa                                                 >  2:389800/1‑275 (MQ=255)
                                                                                                                                                                                                                           acaca‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCACAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGATTAGCGATGGGCGTTGAACCAGCCATGATGGGTTTACTCACCCGTGGCATTATCAGCATCGATGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTACCCCGCGAGGTTACCGATAACCa                                                 >  2:147974/1‑274 (MQ=255)
                                                                                                                                                                                                                                 aaccgaaaTTAAAAAGGTGAGGGGGATAAAAACCAGGCTGGCCGATA‑CCA‑‑CCGCCGCATGTCCCAGCAGCAACGCCGGAGCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACGCCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCa                                           <  2:581947/269‑1 (MQ=255)
                                                                                                                                                                                                                                        aTTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGCTAATCAGCCCCCTccaca                                     >  2:874975/1‑270 (MQ=255)
                                                                                                                                                                                                                                            aaaTGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACTCTTGACCTCGTAACCCGCGAGGATCCCGATAATCCGCCCAATCACAAAAccc                                >  2:336892/1‑275 (MQ=255)
                                                                                                                                                                                                                                              gtGGTGAGTTGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCACGAACCCCTGACCGCCGAACTTCTCCTGTAAACGACTACGCGCCTGCTGAGCGCTGACCGTTACCACCTCCCTGATGGGTTTCATCACCCTGAGCATTAGCACCATCACTACCGCCGTTTTTACCGTCAGCCACCATACACCTTCGACATCGGACACCGCGAGTATGCCGATACTCAGCCCCTGCACAGAAccac                               >  2:322978/2‑272 (MQ=255)
                                                                                                                                                                                                                                              aTGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCg                                                                                                    >  2:97915/1‑205 (MQ=255)
                                                                                                                                                                                                                                              aTGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CAGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTACACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCAATGATGGGTTTAATCACACGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCAGCGAGGATGCCGCTCATCAGCCCCATCACACAACCCa                               >  1:235064/1‑274 (MQ=255)
                                                                                                                                                                                                                                                  tGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAg                                                                                                <  1:97915/205‑1 (MQ=255)
                                                                                                                                                                                                                                                  tGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTACCGCCGTTTTTACCGCCAGCTGCAATACAACTTTGACATCGTAACCCGCGAGGATGCCGATAATAAGCCCCAACACAAAACCCACGGTg                          >  1:189428/1‑275 (MQ=255)
                                                                                                                                                                                                                                                    aGTGGGATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCTTAACCCGCCAGGATGCCGATAAACAGCCCCATCACAAAAACCACGGTgcc                        >  2:607702/1‑273 (MQ=255)
                                                                                                                                                                                                                                                         gATAAAAATCAGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAACCCCACGGTGCCAGTCt                   >  1:96085/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                   aGGCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTCGCCAAATgg         >  2:667774/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                     gCTTGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGAGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTCCCCCAAGGGAc       >  2:438473/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                        tGCCGATA‑CCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGGTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATACCGATAACAATCCCCATCACAAAACCCACGGCGACAGGACCCCCAAAAGGACCac    >  2:839720/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                          ccGATA‑CCA‑‑CCGCCTTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTCGCCAAATGGACCAAAt  <  1:840798/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    ||                                                                                                                                                                                                                                                                          
TTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGA‑TGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACA‑AACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCTTGCCGATA‑CCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTCGCCAAATGGACCAAAT  >  NC_000913/2173088‑2173628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A