Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F17 I0 R1	87	120.7	2441348	95.3%	2326604	231.2

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,536,135	G→C	11.4%	R150R (CGC→CGG)	ompR ←	response regulator in two‑component regulatory system with EnvZ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,536,135	0	G	C	11.4%	151.1 / 2.7	88	R150R (CGC→CGG)	ompR	response regulator in two‑component regulatory system with EnvZ
Reads supporting (aligned to +/- strand): ref base G (29/45); new base C (9/2); total (41/47)
Fisher's exact test for biased strand distribution p-value = 1.02e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.42e-01

CCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTG  >  NC_000913/3535900‑3536368

ccagcccccagacGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTcgc                                                                                                                                                                                                                                               <  1:412530/237‑1 (MQ=255)

 cagaccccagacGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTcgcgcg                                                                                                                                                                                                                                            <  1:767425/239‑1 (MQ=255)

   gaccccagacGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGCCGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGCGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GGACTCGCGG‑ACCCTTTCCCGCGt                                                                                                                                                                                                                                           >  1:219618/1‑238 (MQ=255)

   gaccccagacGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACAATTcgcgcgg                                                                                                                                                                                                                                           >  1:1171805/1‑237 (MQ=255)

     ccccagacGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTa                                                                                                                                                                                                                                          <  1:1208202/237‑1 (MQ=255)

     ccccagacGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑cc                                                                                                                                                                                                                                       <  1:251605/239‑1 (MQ=255)

     ccccagacGGGCTGAATGTAACGCGGATGCGCTGCATCTTCTTCCACCATGCGGCGCAGACGCGAAATCGGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTa                                                                                                                                                                                                                                          <  1:165657/237‑1 (MQ=255)

            ctgtgtgtaggTAACGCGGATGCGCTGTAACTTCTACCACCAGGCGGCGCATGCGCGACATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCGCGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGGTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGAGT‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGTGTA‑CCGAGGt                                                                                                                                                                                                                                  <  2:80333/227‑1 (MQ=255)

            cGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGt                                                                                                                                                                                                                                  <  1:392445/237‑1 (MQ=255)

              gTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCCCGG‑AACATTTCGCGCGTA‑ACGAGGGTA‑Ag                                                                                                                                                                                                                             >  1:214168/1‑239 (MQ=255)

               tCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGATCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CTGCAAACTCACC‑GCTGGCGAGCGG‑CATCGGCTC‑TCCTTCCCGG‑AACCATTTGCGCGTA‑CCGAGGGTa‑a                                                                                                                                                                                                                              >  1:80341/1‑237 (MQ=255)

                         aCGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑CACATTTTGCGCGTA‑CCGCGGGTA‑AATTTGAACTTa                                                                                                                                                                                                                   >  1:909027/1‑238 (MQ=255)

                         aCGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑ACCATTTCGCCCGTA‑CCGAGGGTA‑AGTTTGACCTTa                                                                                                                                                                                                                   >  1:1174522/1‑238 (MQ=255)

                         aCGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGGTTGAACTTa                                                                                                                                                                                                                   >  1:657824/1‑238 (MQ=255)

                         aCGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑CTCTTCGCGG‑GACCTTTCCCCCGTA‑CCGAGGTTA‑CGTTTGAACTTa                                                                                                                                                                                                                   >  2:295275/1‑238 (MQ=255)

                             ggATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑CTCTTCCCGGCAACCTTCCCCGC‑TA‑CCGACGTTG‑ATTTTGTACTTACCgca                                                                                                                                                                                                              >  2:1082748/1‑237 (MQ=255)

                               aTGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GCCTTCGCGG‑GACATTTCCCGCGTA‑CCGAGGGTA‑AGTTTGAACCTTCCCaaa                                                                                                                                                                                                             >  2:873752/1‑238 (MQ=255)

                                             cttcCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCTCACGGA‑CCGAGGTTA‑AGTTTGGACTTACCGAAAGCAAATACCCCctct                                                                                                                                                                                              >  1:722202/1‑239 (MQ=255)

                                             cttcCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCctct                                                                                                                                                                                              >  1:1060984/1‑239 (MQ=255)

                                                 caccaTGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCCGA‑CCGAGGTTC‑AGGTTGAACTTACCGAAAGCAATTACCGCCCCTTcc                                                                                                                                                                                           >  1:120786/1‑238 (MQ=255)

                                                     aTGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGCAAGCAATTTCCGCCTCTTCCtgtg                                                                                                                                                                                       >  1:862193/1‑238 (MQ=255)

                                                      tGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTTGCTG‑GACCTTTTCCGCCGG‑CCCGGGGTA‑AGCTTTAACTTAACGTAAACCATTCACCCCTCTTCCTCTGa                                                                                                                                                                                      >  2:78347/1‑238 (MQ=255)

                                                      tGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGATTGAACTTACCGAAAGCACTTACCGCCCCTTCCTGTGAc                                                                                                                                                                                     >  1:536468/1‑239 (MQ=255)

                                                      tGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GCCTTCCCGG‑AACATTTCGCCCGGA‑CCGAAGTTA‑AGTTTGAACTTAACCAAAGCAATTTCCGCCTCTTCCTTTGAc                                                                                                                                                                                     >  1:194467/1‑239 (MQ=255)

                                                      tGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTAATC‑GCTTAACCC‑CGGAGGACCGCCCACCCCGGA‑TGCCTGACCAGGGCCTTCATAC‑CCGCAAACTC‑CC‑CCCGGGGAGCGGCCATCGCCCC‑GTCTTCGCGG‑CACTTTTCTCCCCTC‑CCGGGGTTA‑GTTTTGAATTTCCCTAACGCCATTACCCCCCCTTCCCGTGAc                                                                                                                                                                                     >  2:696522/1‑239 (MQ=255)

                                                       gcggcgCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AAAATTTCGCGCGTA‑CCGAGGGTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACg                                                                                                                                                                                    >  1:992727/1‑239 (MQ=255)

                                                        cggcgAAGACGCGAAATCGGCACGCCGATGGAGCGTTCCATTGGGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑GGGCTGACCAGTGCCTTCGGTA‑CCGCAAACTCCCC‑GCGGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTCCCGAAAGCAATTACCGCCTCTTCCTGTGACg                                                                                                                                                                                    <  2:730572/238‑1 (MQ=255)

                                                                aCGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GGCTTCCCGG‑GACCATTCCCGCGTG‑ACGAGGGTA‑AGTTTTCACTTACCGAAACGAATTACCGCCCCTTTCtgttgccgggtgc                                                                                                                                                                              >  2:153624/1‑226 (MQ=255)

                                                                    gAAATCTGCACGTCGATGGAGCGTCCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCC‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTC‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCa                                                                                                                                                                        <  1:873752/238‑1 (MQ=255)

                                                                                tCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GGCTTCGCGG‑ATCATTTCTCGCCTA‑CCCAGGGGA‑AAGTTGAATATCCCCTAAGCAATTACCCCCCCTTCCGTTTACGCTGCACCTGGGAggttcatggccg                                                                                                                                                            >  2:423473/1‑227 (MQ=255)

                                                                                  gggggAGGGTGCCAGTGCGAAATATCCACGCCCGGGGGCAGGGTTCATC‑GCCTTGCGCGGGGAGGGCGGCTC‑‑CGGGGAGTGGCTGCCCCGGGCCTCAAGTA‑CCGCAAACCCCCC‑GCTGGGGGGGGG‑CGGCGGCTC‑TTCTCCGGGG‑AACATTTCGGGCGTA‑CCGAGGTTA‑AGTGTGAACTTCCGGAAAGAAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTga                                                                                                                                                          <  2:905910/235‑1 (MQ=255)

                                                                                  gATGGAGCGTTCAAGTGCGGAATATTCACGACCAGGGGCAGGGTTCATCAGTTTATCGC‑GGGAGGGCGGCGCC‑CGCGGA‑GGGCTGACCAGTGCCTTCAGTC‑CCGCAAACTCCCC‑GCTGGTGAGCGG‑CATCGGCTG‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAGGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTga                                                                                                                                                          <  2:279916/238‑1 (MQ=255)

                                                                                    tGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGGTA‑AGTTTGAACTTACCGAAAGCAATTAACGCCTCTTCCTGTGACGGTGCGCCTGGCAGGTCGTTCCCCTgacg                                                                                                                                                        >  1:1214716/1‑238 (MQ=255)

                                                                                         cGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGACG‑GACCTTTCGCGCCTA‑CCGAGGTTA‑AGGTTGAACTTACCGAAAGAAATTACCGCCTCTTCCCGTGGCGGTGCCCCCGGCAGTTCGTTCGCCTgccgcagca                                                                                                                                                   >  2:1194607/1‑233 (MQ=255)

                                                                                           ttCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTTGCGG‑GACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACCTACCCGAACCAATTACCGCCTCTTCCTGTGACGGTGCCCCTGGCAGTTTCTTCTCCCggcgacccccc                                                                                                                                                 >  2:35588/1‑233 (MQ=255)

                                                                                           ttCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACgcagc                                                                                                                                                 >  1:760366/1‑238 (MQ=255)

                                                                                                     gAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGGTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGAt                                                                                                                                      >  1:931365/1‑239 (MQ=255)

                                                                                                      aaTATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGGTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTCACCGTGCGCCCGGCAGTTCGTTCTCCTGACGCCGCAGCACCGCCCGGag                                                                                                                                      >  1:746088/1‑237 (MQ=255)

                                                                                                       atcttCACGACCCCGGGCAAGGTTCATCAGCTTACCGC‑GGGAGAGCGGCTCA‑CGGGGA‑TGGCTGCCAAGTGCCTTCATTC‑CCGCAAACCCACC‑GCTGGTGGCCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATa                                                                                                                                     <  1:1129942/235‑1 (MQ=255)

                                                                                                              cGACCACGGGCAAGGTGCATCAGCTTACGGC‑GGGAGAGCGGCTCA‑CGCGGA‑GGGCTGGCCAGTGCCTTCACGA‑CCGCAAACTCACC‑GCGGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑ACCATTTCGCGCGTC‑CCGAGGTTA‑AGTTTGAACTTCCCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCcag                                                                                                                             <  2:1108718/239‑1 (MQ=255)

                                                                                                                aCCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGGAATTACCGAAAGCAATTACCGCCTCTTCCTCTGACGGTGCGCCCGGCAGTTCGTTCGCCTGACGACGCCACCCCGCACGGCGACGGGGcacac                                                                                                                           >  2:392382/1‑236 (MQ=255)

                                                                                                                aCCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGGTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACCGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCcagca                                                                                                                           >  1:561237/1‑239 (MQ=255)

                                                                                                                 cccggggCAAGGTTCGTCAGCTTCCGGC‑GGGAGACCGCCTCA‑CGCGGG‑TGGCTGCCCAGTCCCTTCAGTC‑CCCCAACCTCCCC‑GCTGGTGGGCGG‑CATCGGCTC‑TTCTTCGGGG‑AACATTCCGCGCGTC‑CCGGGTTTA‑AGTTGAAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCcagcag                                                                                                                          <  2:992727/235‑1 (MQ=255)

                                                                                                                        cAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCTTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACTTTCCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCAcg                                                                                                                    <  1:200084/238‑1 (MQ=255)

                                                                                                                         aaGGTTCCTCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCGCC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTCCCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCAcg‑c                                                                                                                  <  1:1067053/238‑1 (MQ=255)

                                                                                                                                gtcggtgtacagc‑gGGGGAGCGGCCCC‑CGCGGA‑TGGCTGACCCTGTCCTCCAGCG‑CCGCAACCGCACC‑GCTGGTGGGCGG‑CTTGGGCGC‑CTCGTCGCGG‑ACCATGTCGCGCGTA‑CCGAGTGTA‑AGTTGGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGGTCGTTCGCCGGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTaaa                                                                                                          <  2:120255/228‑1 (MQ=255)

                                                                                                                                gtcaGCTTATCGC‑GGGAGAGCGGCTCC‑CGCGGA‑TGGCTGCCCAGTGCCTTCAGTC‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGGTC‑GTCTCCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑GGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTaaa                                                                                                          <  1:423473/238‑1 (MQ=255)

                                                                                                                                atcaGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCCCC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTCCCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTaaa                                                                                                          <  1:469055/239‑1 (MQ=255)

                                                                                                                                atcaGCTTATCGC‑GGGAGAGCGACTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGCGGTTA‑AGTTTTAACTTACCGAAAGCAATTACCGCCTCTTCCTTTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCCGCAGTTCCCG‑CGGGTTaa                                                                                                           >  1:907224/1‑238 (MQ=255)

                                                                                                                                atcaGCGTATCGC‑GGGAGAGCGGCTCA‑CGGGGT‑GGGCTGAACAGTGCCTACAGTA‑CGGCAACCTCCCC‑GCTGGGGGGCGG‑CAGCGGCTC‑GTCTTCGCGG‑AAAATTTCGCGCGTG‑CGGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTaaa                                                                                                          <  2:4770/239‑1 (MQ=255)

                                                                                                                                accaGTTTATGCC‑GGGAGAGCCGCTCC‑GGCGGA‑GGGCTGACAAGTGCCTTCAGTC‑CCCCAACCTCCCC‑GCTGGTGGGCGT‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTCCCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTaaa                                                                                                          <  2:657824/237‑1 (MQ=255)

                                                                                                                                     cTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGACCGTA‑CCGAGGGTA‑AGCTTGGACTTACCCAAAGCAATTAACGCCTCTTTCCGTTACGGTGCCCCTGGCAGTTCGCTCCCCTCACGACGCACGACCCCACCGGTACCGGGCCGAACGTCACGCCGGGTTAAACGGt                                                                                                      >  2:485527/1‑239 (MQ=255)

                                                                                                                                      ttATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGGTA‑AGTTTGTACTTTCCGAAAGCAATTACCGCCTCCTCCTGTGACGGTGCGCCTGGCAGTTCGTTCTCCTGACGCCCCAGCCCCGCCCGGATACCGGGCCGCGGTTCCCG‑CGGGGTacaccggtt                                                                                                    >  2:907131/1‑234 (MQ=255)

                                                                                                                                      ttAGCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGGTGACCAGTGCCTTCAGTA‑CCGCAAACTCCCC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTGCGCGCGTC‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGt‑t                                                                                                    <  1:969499/238‑1 (MQ=255)

                                                                                                                                       tATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGGTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCCCCGCACGGATACGGGCCCGCAGTTCACG‑CGGGGTAAACGGt‑ttt                                                                                                  >  1:80169/1‑239 (MQ=255)

                                                                                                                                          ggc‑gGGGGAGCGCCTCG‑CGGGGA‑TGGCTGACCAGTGCC‑TCAGGACCCGAAACCTCACC‑GCTGGTGAGCGG‑CAGCGGCGC‑GTCTTCGCGG‑ACCATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGa                                                                                               <  2:284737/238‑1 (MQ=255)

                                                                                                                                          cgc‑gGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTC‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGa                                                                                               <  1:978617/239‑1 (MQ=255)

                                                                                                                                               ggAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCGTTGCGG‑GACATTTCCCCCGTT‑CCCCGGGTA‑AGCTTGTACTTTCCAGAAGCAATTACCGCCTCTTCCCGTGACCGGTCGCCTTGCCAGTCGATCCCCATGCGACGCCGCCCCTCCCCGAGACGGGCCAGCCGTTCCCG‑CGGCTTATACGGg‑ttttgcacat                                                                                           >  2:704160/1‑232 (MQ=255)

                                                                                                                                                gagaGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GGCTTCTGGG‑AACAATTCCCGCGTA‑CCGAGGGTA‑AGTTTGAACCTACCGGAAGCAATTTCCGCCTCTTCCCGTGACGGGGCGCCCGGCAGTTCGGTCGCCTGAAGACGCAGCACCGCCCGGAGACGGGCCAGCAGCTCACG‑CGGGTTAAACGGG‑TTTGGA‑AAGTa                                                                                         >  2:530715/1‑239 (MQ=255)

                                                                                                                                                        cTCA‑CGGGGA‑TGGCGAACCAGTGCCTTCAGTA‑CCGCAACCCCCCC‑GCGGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAg                                                                                 <  1:1202944/239‑1 (MQ=255)

                                                                                                                                                        cTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGGTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCCGTGACGGTGCGCCTTGCAGTTCGTTCGCCTGCCGACGCAGCACCGCACGGGGACGGGCCCGCCGTTCACC‑CGGGTTAAACGGTGTTTGGA‑ATGtgtcggccg                                                                                  >  2:655903/1‑231 (MQ=255)

                                                                                                                                                              gcgGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCGGGTGAGCGG‑CATCGGCCC‑GTCTTCGCGG‑ACCATTTCGCGCGTA‑CCGAGGTTA‑GGTTTGAACTTACCAAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCa                                                                            <  1:78347/239‑1 (MQ=255)

                                                                                                                                                               gctggtggtcgACCAGTGCCGTCAGTA‑CCGAAAACTCCCC‑CCTGTGGGGCGG‑CTTCGTCTCTGTC‑TCGCAG‑AACATTTCGCGTGTA‑GCGAGGTTA‑AGTTTGACCTTACCAAAAGCAATTTCCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCa                                                                            <  2:746088/229‑1 (MQ=255)

                                                                                                                                                                    tGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCCG‑AACATTTTGCGCGTA‑CCGAGGGTA‑AGTTTTAACTTTCCGCAAACAATTACCGCCTCTTCCTGTGTCGGGGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGGTACGGGCCCGCAGGTCACC‑CGGGGTAAACGGT‑TTTGGACATG‑AGTCGTCAGCGcccctcc                                                                        >  2:343483/1‑233 (MQ=255)

                                                                                                                                                                     ggCTGACCAGTGCCTTCAATC‑CCTCAAACTCCCC‑GTGGGTGAGCGG‑CCTCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTGGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTcc                                                                      <  1:1117927/239‑1 (MQ=255)

                                                                                                                                                                     ggCTGACCAGTGCCTCCAGTA‑CC‑CAAACCCCCCGGCTGGTGAGCGC‑CATCGGTTC‑GTCTTCGCGG‑AACATTCCGCGCGTT‑CCGAGTTTA‑AGTTTGAACTTCCCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAAtctc                                                                       <  2:985066/238‑1 (MQ=255)

                                                                                                                                                                      gCTGCCCAGTGCCTTCAGTC‑CCGCAAACTCCCC‑GCTGGGGAGCGG‑CAGCGGCCC‑GTCTTCGCGG‑AACATTGCGCGCGTG‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATAACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTcc                                                                      <  2:194467/238‑1 (MQ=255)

                                                                                                                                                                         gcccAGTGCCTTCAGTC‑CCGCAACCTCCCC‑GCTGGGGGGCGG‑CATCGGCTC‑GTCTTCGCGG‑ACCATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGc                                                                  <  1:295275/237‑1 (MQ=255)

                                                                                                                                                                         gACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑ACGAGGTTA‑AGTTTGAACTTTCCGAAAGCAATTACCGCCTCTTCCTGTGACGGGGCGCCCGGCCGGTCGTTCGCCTGACGACGCAGCACCGCCCGGATACGGGCCAGCAGGTCACG‑CGGGTCAAACGGT‑TTTGGA‑AGGGAGTCCGCCGCCCCAATCTCCAgg                                                                   >  2:869739/1‑238 (MQ=255)

                                                                                                                                                                            cAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTa                                                               <  1:153624/239‑1 (MQ=255)

                                                                                                                                                                                 tctacattA‑CCGCAATCCCCCC‑GCGGGTGCGGGG‑CACGGGCGC‑GTCTACGCGG‑AACATTCCGCCCGTA‑CCGAGTTTA‑GGTTGGAACTAACCGAAAGAAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATa                                                          <  2:871098/232‑1 (MQ=255)

                                                                                                                                                                                 ctttCTGTC‑CCGCAACCTCGCC‑GCTGGTGGGCGA‑CATCGGCTC‑GTCTCCGCGG‑AACATTTCGCGCGTA‑CCGAGGTAA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATa                                                          <  1:1082748/237‑1 (MQ=255)

                                                                                                                                                                                 ccTTCAGTC‑CCGCACACCCCCC‑GCTGGGGGGGGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTC‑CCGAGGTTA‑AGTTTGAACTTACCGAAATCAATTCCCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATa                                                          <  2:340398/239‑1 (MQ=255)

                                                                                                                                                                                 ccTTCAGTA‑CCGCAACCTCACC‑GCTGGTGGGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATa                                                          <  1:830748/239‑1 (MQ=255)

                                                                                                                                                                                  cTTCAGTA‑CCGCAAACCCACC‑GCGGGTGGGCGG‑CACCGGTCC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATa                                                          <  1:35588/238‑1 (MQ=255)

                                                                                                                                                                                         a‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCCCGG‑AACATTTCGCGCGTA‑CCGGGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGGCGCAGCACCGCACGGATACGGGCCAGCAGTTTCCC‑CGGGGTAAACGGT‑TTTGGA‑ATGTAGGCGTCCGGCCCAATCTCCCGGCCTACGAtcaggttca                                                   >  2:1086867/1‑230 (MQ=255)

                                                                                                                                                                                          cccGAAACCTCACC‑GCTGGTGGGCGG‑CATCGGCTC‑GTCTTCGCGG‑AAAATTCCGCGCGTC‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTcc                                                    <  1:666760/236‑1 (MQ=255)

                                                                                                                                                                                              cAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGGTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGGTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCActtct                                              >  1:151843/1‑239 (MQ=255)

                                                                                                                                                                                                accTCCCC‑CCTGGTGAGCGG‑CCTCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTC‑CCGAGGTTA‑AGTTTGATCTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACttcttc                                            <  1:660385/237‑1 (MQ=255)

                                                                                                                                                                                                   tCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑CACATTTCCCGCGTA‑CCGAGGGTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGGGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCCCCGCCCGGCTACGGGCCAGCAGTTCACG‑CGGGTTAAACGGG‑TTTGGA‑ATGTAGTCGGCAGGGCCAATCTCCAGGCCTCCGACACGGGCCGCTTCTTccc                                          >  2:883227/1‑238 (MQ=255)

                                                                                                                                                                                                           tggggggCGG‑CATCGGGTC‑GTCTCGGCGG‑ACCTTTTCCCGCGTA‑CCGGGTTTA‑AGTGTAAATTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGcc                                  <  2:331701/233‑1 (MQ=255)

                                                                                                                                                                                                              tgtgCGG‑CATCGGCCC‑GTCTCCGCGA‑AACATTTCGCGCGTC‑CCGAGGTTA‑AGTTTGAACTTCCCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGt                                <  2:214168/235‑1 (MQ=255)

                                                                                                                                                                                                              ggggCGA‑CAGCGGCTC‑GTTTCGGCGA‑AACTTTCCGCGCGTA‑CCGAGGTTA‑AGTTTGACCTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGt                                <  2:151843/235‑1 (MQ=255)

                                                                                                                                                                                                              agAGCGT‑CCTCGTCTC‑GTTTTCGCGG‑AACATCCCGCGCGTT‑GAGAGGTAA‑AGTTTGACCTGACAGATGGCATTTACCGCCTCTTCCTGTGACGGTGCGCCTGCCAGTTCGATCGCCGGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTGCGCCGt                                <  2:335238/237‑1 (MQ=255)

                                                                                                                                                                                                                          ggCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGAt                    <  1:907131/239‑1 (MQ=255)

                                                                                                                                                                                                                             gtccgcctcccgG‑AACCTTTCCCGGCTACCCGAGGTAA‑AGTTGGACCTACCCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGAt                    <  2:1214716/228‑1 (MQ=255)

                                                                                                                                                                                                                                gTCTTCGCGG‑AACATTCCGCGCGTC‑CCGAGGTAA‑AGTTTGAACTTCCCGAAAGAAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCa               <  1:655903/239‑1 (MQ=255)

                                                                                                                                                                                                                                gTCTTCGCGG‑AAAATTACGCGGGTA‑ACG‑GGTTAGAGTTTGAACTTCCCAAAGCCAATTCCCGCCGCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCa               <  2:907224/239‑1 (MQ=255)

                                                                                                                                                                                                                                     cgggg‑AACATTTCGCGCGTA‑CCAGGTTTA‑GGTGGGAACGTACAGAAAGCAATTCCCGCCGCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCggg          <  2:561237/236‑1 (MQ=255)

                                                                                                                                                                                                                                           acaaTTCCGCGCTCA‑CGGAGGTAA‑CGTGTGACCTACCCGAAAGCATTCCCCGCCTCTCCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGc      <  2:1171805/235‑1 (MQ=255)

                                                                                                                                                                                                                                                ttCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCACGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTg  >  1:1101565/1‑237 (MQ=255)

CCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGC‑GGGAGAGCGGCTCA‑CGCGGA‑TGGCTGACCAGTGCCTTCAGTA‑CCGCAAACTCACC‑GCTGGTGAGCGG‑CATCGGCTC‑GTCTTCGCGG‑AACATTTCGCGCGTA‑CCGAGGTTA‑AGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACG‑CGGGTTAAACGGT‑TTTGGA‑ATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTG  >  NC_000913/3535900‑3536368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A