Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F17 I0 R1 87 120.7 2441348 95.3% 2326604 231.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,201,278 A→C 14.8% G137G (GGT→GGG)  zraP ← Zn‑dependent periplasmic chaperone

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,201,2780AC14.8% 265.7 / 4.8 113G137G (GGT→GGG) zraPZn‑dependent periplasmic chaperone
Reads supporting (aligned to +/- strand):  ref base A (67/24);  new base C (2/18);  total (70/43)
Fisher's exact test for biased strand distribution p-value = 1.61e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 120 total aligned reads displayed.

CAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCTTT  >  NC_000913/4201040‑4201516
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                              
cAGGTGCTCTGGCATGCGATGGAACCGGCCGTGACCACCGTCGAAGGGCAAACCATTAACCCTGATTTAGATTCGCAGGCGATAGCT‑CATAGCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATGTACCAGTGGcccata                                                                                                                                                                                                                                                <  2:645401/239‑1 (MQ=255)
cAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGcccata                                                                                                                                                                                                                                                <  1:826571/239‑1 (MQ=255)
  ggggCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGcccatac                                                                                                                                                                                                                                               >  1:908996/1‑238 (MQ=255)
  ggggCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGcccatac                                                                                                                                                                                                                                               >  1:363489/1‑238 (MQ=255)
        cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATCCCCATATg                                                                                                                                                                                                                                        >  2:566721/1‑239 (MQ=255)
        cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATg                                                                                                                                                                                                                                        >  2:399183/1‑239 (MQ=255)
        cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGCAAGCGCCCGAATGTTCGCACTTACTGTTCGTGGCAAACTCTGATTTCCGTCGCCGGCAACCCAACGAGAAACCGTCCTGTTTTACCAGTGGCGCATCCCCatat                                                                                                                                                                                                                                         >  2:1125963/1‑238 (MQ=255)
              tGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGcc                                                                                                                                                                                                                                  <  1:251592/239‑1 (MQ=255)
              tGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGc                                                                                                                                                                                                                                   >  1:447935/1‑238 (MQ=255)
                     gAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCaccacc                                                                                                                                                                                                                            >  1:1070726/1‑238 (MQ=255)
                        cAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCa                                                                                                                                                                                                                         >  1:36048/1‑238 (MQ=255)
                           aCCGTGACCACCTGCGCAGGTCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCGCTTCTGTTGATGTCAGCGTTGCATGGCTGGAAGAGCCCGACGGTTCTCAAGTACTGTTAGTGGGAAGTTCTGATTTCTGTCGCTGGCACCCCAACGAGAAAACGTCCTGACTTATCAGTTGCCCATACCCATCTCACCGCACACACCGCAccc                                                                                                                                                                                                                      >  2:625658/1‑238 (MQ=255)
                             cGTGACCACCTGGGAAGGGCAAACCATAAACCCTGATTTAGATGCGCGGGCGATAGCG‑CATATCGGGCGCCGCCAGGGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAGGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAgccgcc                                                                                                                                                                                                                   <  2:1092436/239‑1 (MQ=255)
                             cGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAgccgc                                                                                                                                                                                                                    >  2:300790/1‑238 (MQ=255)
                              gTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTCCCAGTGGCCCATCCCCATATGACCGCCACCACCGCAGccgccg                                                                                                                                                                                                                  <  1:15939/239‑1 (MQ=255)
                               tGACCACCTGCGAAGGGCCAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGt                                                                                                                                                                                                                 >  1:509741/1‑239 (MQ=255)
                               tGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGt                                                                                                                                                                                                                 >  1:845465/1‑239 (MQ=255)
                                gACCACCTGCGGAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCATCCGCCGt                                                                                                                                                                                                                 >  2:372789/1‑238 (MQ=255)
                                gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTa                                                                                                                                                                                                                >  1:73200/1‑239 (MQ=255)
                                gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGAGATAGCG‑CATATCGCGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAACGCCCGACGGTTCGCACTTACTGTTAGTGGCAAGCTCTGATTTCTGTCGCTGGCAACCCAACCAGAAAACGTTCCGAGTTACCAGTGGCACCTTCCCAACTAACCCCAACCACCGCAgccgactta                                                                                                                                                                                                                >  2:605638/1‑234 (MQ=255)
                                    accTGCGAGGGGCAACCTATAAACCCTGAGTTCGATCACGGGGCAATGGCG‑CTTTTCGGACGCCGCCAGGCCCGCTTTTCTGTAGATCTAAGCGTGGCTTGGCTGGAGCCGCCCGAAGGTTCGCAATTCGTGTTAGTGGAAAACTCTGATTTCTGTCCCTGGCAACCCAACGAAAAAACCTTCTGATTTACCAGTGCCCCATACCCAAGTGACCGCCACCACCGCAGCCGCCGTAgccc                                                                                                                                                                                                            <  2:1105550/239‑1 (MQ=255)
                                     ccTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGCAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGACgccca                                                                                                                                                                                                           >  1:624265/1‑239 (MQ=255)
                                     ccTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCCGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAgtcc                                                                                                                                                                                                            >  2:1057363/1‑238 (MQ=255)
                                     ccTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAgccca                                                                                                                                                                                                           >  1:124718/1‑239 (MQ=255)
                                        gCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATACAACCGCCACCACCGCAGCCGCCGTAgcccatg                                                                                                                                                                                                         >  2:568323/1‑238 (MQ=255)
                                          gAAGGGCAAACCATGAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTTTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCAAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAgcccatgcc                                                                                                                                                                                                       <  1:441400/238‑1 (MQ=255)
                                                   aCCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGc                                                                                                                                                                                              >  1:964088/1‑238 (MQ=255)
                                                        tAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATTCCCATTCCGGcgccgc                                                                                                                                                                                         >  2:1191713/1‑238 (MQ=255)
                                                        tAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCGGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTATGATTTACCAGTGGCCCATACCCCTATGACCGCCACCACCGCAGCCGCCGAAGCCCATGCTCATTCCGGCACcgc                                                                                                                                                                                         >  2:898094/1‑238 (MQ=255)
                                                          acccTGTTTAAGATCCGCGGGCGA‑AGCGCCATACCGAGCCCCCCCAGGCCCGCCTTTTTGTGGATGTCAGCGGGGCATGGCTGGAAGCGCCCGAATGTTCGCAATTACTTTAAGTGGCAACCTCTGATTTCTTCCGCGGGCAACCCACCGAAAAACCGTTCTGATTTCCCAGTGCCCCATCCCCAAATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCcgcgcg                                                                                                                                                                                      <  2:845465/237‑1 (MQ=255)
                                                               gATTTAGATTCGCTGGCGATAGCG‑CATATCGCGCGCCTCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCCAAATCTGATTTCTGTCGCTGGCACCCCAAAGAGACAACGTTCTGATTCACCATTGGCCTATACCCATATCACCGCCACCACCGCAGCCGCCGTCACCCAAGCCCATTCCCGCTCCGCCCGGaac                                                                                                                                                                                  >  2:149372/1‑237 (MQ=255)
                                                               gATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGTTGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGGTTTCTGTCGCTGGCACCCCAACGAGACAACGGGCTGATTTACCAGTGGCCCATACCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGACCATTCCGGTTCCGCGCGGAAt                                                                                                                                                                                  >  2:945392/1‑238 (MQ=255)
                                                               gATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAAt                                                                                                                                                                                  >  2:822393/1‑238 (MQ=255)
                                                               gATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCAAGCCCATTCCGGCTCCGCCCGGAAt                                                                                                                                                                                  >  1:416368/1‑238 (MQ=255)
                                                                 tttAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTTTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATCCCGGCCCCGCGCGGAATAc                                                                                                                                                                                >  1:909100/1‑238 (MQ=255)
                                                                          gCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGCTTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAg                                                                                                                                                                       >  1:480053/1‑238 (MQ=255)
                                                                          gCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGAGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCACACTCTGATTTCTGTCGCGGGCAACCCAACGTGAAAACGTTCTGATTTCCCAGTGGCACATACCCATATGACCGCCACCACCGCATCCGCCGTATCCCACGCCCATTCCTGCTCCTCGCGGAATACCCGCTTctg                                                                                                                                                                       >  2:934195/1‑236 (MQ=255)
                                                                                        cATAGCGAGCGCCGCCCGAGCCGCCCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTCCTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCACCGAGAAAACGTTCTGATTTCCCAGTGCCCCATCCCCATATGACCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATAtct                                                                                                                                                         <  2:11077/239‑1 (MQ=255)
                                                                                         atatCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATAtctc                                                                                                                                                        >  1:1142213/1‑239 (MQ=255)
                                                                                           atCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGt                                                                                                                                                      >  1:379822/1‑239 (MQ=255)
                                                                                           atCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACACAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGAAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGACTCAGCCATCGACATATCTCGt                                                                                                                                                      >  2:436835/1‑239 (MQ=255)
                                                                                            tCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCGGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGtt                                                                                                                                                     <  1:883173/239‑1 (MQ=255)
                                                                                               aGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCCTTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTc                                                                                                                                                   >  1:578703/1‑238 (MQ=255)
                                                                                               aGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTc                                                                                                                                                   >  1:702583/1‑238 (MQ=255)
                                                                                               aGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTc                                                                                                                                                   >  1:658642/1‑238 (MQ=255)
                                                                                                 cgccgcCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCAc                                                                                                                                                 >  1:1137550/1‑238 (MQ=255)
                                                                                                           gCCGCTCTTTGGTTTATGTCAGCGTGGCATGGCTGGAAGCCCCCGAAGGTTCGCAATTACTGTTAGGGGCAAACTCTGATTTCTGCCGCTGCCACCCAACCGAAAAAACGTCCTGTTTTACCAGTGCCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACt                                                                                                                                         <  2:1036514/236‑1 (MQ=255)
                                                                                                              gCTCTTCTGTTGGTGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCCCAGCAACCGCCCTAACCCATGCCCATTCCGGCTCCGCACGCAATACCCGCTTCCGCCCACCCGCTATCTCGTTTACCCCTTAACTCATcg                                                                                                                                    >  2:154977/1‑237 (MQ=255)
                                                                                                                         gATGTCAGCGTGGCATGGCTGGAGGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCCACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCCTGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCCGCCATCGCGATATCTCGTTTCACCCGTACCTCATCTAACGCCTGCCg                                                                                                                         >  2:357827/1‑238 (MQ=255)
                                                                                                                           ggTCAGCGTGGCATGGCTGGAAGCGCCGGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGCCGCGGGCACCCCAACGAGAAACCGTTCTGATTTCCCAGTGGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCa                                                                                                                       <  1:566721/237‑1 (MQ=255)
                                                                                                                            ttgaGCTTGACAAGGCCGGAAGCCCCCCACGGGTCGAAATTACTGTGAACGGCACAATCTGATTTCTGTCGCTGGCAAACCATCGAGAAAACGTTTTAATTTAGCAGTGGCCAATATCCATATGACCACCACCACCGCAGCCGCCGTAGCCCATGCCCGTTCCGGCTCCCCCTGACATACCCGCTTACGCCACCGCGCTCTATCGTTTCCCCCGAAACTCATCGACCGACtaccgccaa                                                                                                                     >  2:747629/4‑231 (MQ=255)
                                                                                                                            gccaggggggCATGGTGGGAGGCCCCCGAGGGTTCGCAATTCCTGTTGTTGCAAAATTTTGATTTCTGCCGCCGGAAACCCAACGAGAAACCGTTCTGATTTACCAGTGCCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                                                     <  2:908996/231‑1 (MQ=255)
                                                                                                                            gTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGCGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                                                     >  1:768182/1‑239 (MQ=255)
                                                                                                                            gTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa                                                                                                                     <  1:822393/239‑1 (MQ=255)
                                                                                                                               aGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAAtt                                                                                                                   >  2:444303/1‑238 (MQ=255)
                                                                                                                                 cGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGCGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGCCGCAAATtct                                                                                                                 >  1:54487/1‑238 (MQ=255)
                                                                                                                                 cGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGCTCTCTCGTTTCACCCGTAACTCACCTAACGCCTgccccaccttct                                                                                                                 >  2:661794/1‑227 (MQ=255)
                                                                                                                                 cGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATtct                                                                                                                 >  1:660611/1‑238 (MQ=255)
                                                                                                                                     gCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTACCTCATCTAACGACTGACGCAAATTCTCCa                                                                                                              >  1:685744/1‑237 (MQ=255)
                                                                                                                                              gAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCCGCCATCGCGATCTCTCGTTTCACCCGTAACTCATCTCACGCCTGCCGCACATTCTCCATCTCTTTAGc                                                                                                    >  2:591309/1‑238 (MQ=255)
                                                                                                                                               gaGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAACTTCTCCATCTCTTTGGCg                                                                                                   >  2:742672/2‑238 (MQ=255)
                                                                                                                                                    cccGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACcgcg                                                                                             >  2:1133220/1‑239 (MQ=255)
                                                                                                                                                    cccGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGATTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACcgcg                                                                                             >  1:160919/1‑239 (MQ=255)
                                                                                                                                                     ccGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGt                                                                                            >  2:948664/1‑239 (MQ=255)
                                                                                                                                                     ccGAAGGTTCGAAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGt                                                                                            <  1:898094/239‑1 (MQ=255)
                                                                                                                                                        aaGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTaa                                                                                         >  1:160886/1‑239 (MQ=255)
                                                                                                                                                            ttCGCAATTCCTGTTAGTGGAAAACTCTGATTTCTGTCGCGGGCAACCCAACGAAAAAACGTTCTGATTTCCCAGTGGCCCATCCCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAAttt                                                                                      <  1:970053/238‑1 (MQ=255)
                                                                                                                                                              cGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAAtttt                                                                                     >  1:743242/1‑237 (MQ=255)
                                                                                                                                                               gCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCACCCCAACGAGAAACCGTTCTGATTTACCAGTGGCCCATACCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTtgct                                                                                  <  1:188703/239‑1 (MQ=255)
                                                                                                                                                                     aCTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCCAt                                                                             >  1:600512/1‑238 (MQ=255)
                                                                                                                                                                           aGTGGCAAACTCTGATTTCTGTCGCTGGCCACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGACTCCGCGCGGAATACCCGCTTCAGCCATCGCGATCTCTCGTTTCACCCGTAACTCATCTAAGGACTGACGCCAATTTCCCATCTCTTTGGCGACCCCGTTAATTTTCCCTCCATCAGGTgg                                                                      >  2:1184385/1‑239 (MQ=255)
                                                                                                                                                                           aGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCCGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTgg                                                                      >  2:122081/1‑239 (MQ=255)
                                                                                                                                                                             tGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAACTTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGt                                                                    >  1:385946/1‑239 (MQ=255)
                                                                                                                                                                              ggCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCCCGATATCTCGTTTCACCCGTCACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGt                                                                    >  2:932104/1‑238 (MQ=255)
                                                                                                                                                                                  acctctGATTTTTGCCGCTGGAACCCCAACGAGAAACCTTCCTGATTTCCCAGTGGCCCATACCAATACGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTcgcg                                                               <  1:1057363/237‑1 (MQ=255)
                                                                                                                                                                                  aaCTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTcgcg                                                               <  1:1125963/239‑1 (MQ=255)
                                                                                                                                                                                    cccggATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTCCCAGTGGCCCATCCCCATATGCCCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGc                                                             <  1:1191713/235‑1 (MQ=255)
                                                                                                                                                                                      ctGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTa                                                           <  1:300790/239‑1 (MQ=255)
                                                                                                                                                                                      ctGATTTCTGCCGTGGGCACCCCAACGAGAAACCGTTCTGATTTCCCAGTGGCCCCTGCCCATGTGACCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTa                                                           <  1:357827/239‑1 (MQ=255)
                                                                                                                                                                                          gttCTGTCGTTGGCACCCCACGGAGAAACCGTCCTGATTTACCAGTGGCCCATACCCATATGACCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACa                                                        <  1:1172703/237‑1 (MQ=255)
                                                                                                                                                                                              tGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTACTTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAggg                                                     >  2:1090053/1‑237 (MQ=255)
                                                                                                                                                                                              ggTCGCTGCCACCCCAACGAGAAACCGTTCTAATTTCCCAGTGCCCCATCCCCATATCACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCa                                                   <  2:660611/238‑1 (MQ=255)
                                                                                                                                                                                               gTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCAt                                                  >  1:26304/1‑239 (MQ=255)
                                                                                                                                                                                               gTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGCTTCGCGGCTAACAGGGCAt                                                  >  1:101410/1‑239 (MQ=255)
                                                                                                                                                                                                 cgatGGCAACCCAACGAGAAAACGTACTGATTTACCAGTGCCCCATACCAATAGGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCAtt                                                 <  1:934808/235‑1 (MQ=255)
                                                                                                                                                                                                  gCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGt                                               <  1:399183/239‑1 (MQ=255)
                                                                                                                                                                                                  gCTGCCACCCCAGCGAGAAACGGTGCGCATTACCCAGCGGCCAATACCGAGATGCCCGCCACCACCCCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGt                                               <  2:379822/239‑1 (MQ=255)
                                                                                                                                                                                                      gCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAAGGCATTGTAtt                                            <  1:903083/238‑1 (MQ=255)
                                                                                                                                                                                                          cccACCGAAAAACCGTTCTGATTTCCCATGGGACCATCCCCGTAGCACCGCCCCCACCCCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATaa                                       <  2:124718/239‑1 (MQ=255)
                                                                                                                                                                                                          cccAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATa                                        >  1:628115/1‑238 (MQ=255)
                                                                                                                                                                                                                ggaaaacCGTTCTAATGTCCCAGGGGCCCATCCCGATAGGCCCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTc                                 <  2:231218/236‑1 (MQ=255)
                                                                                                                                                                                                                     agcGTTCTAATTTACCAGTGGCCTATACGCATATGACCGCCACCACCGCATCCCTCGTATCCCATGCCCATTACATCTCCGCCCGGACTACCCCCATCAGGCATCGCGAAAACTCGTTTCACCCGTAACTCATCTAACGAACGACCCAATTTCTCCATCTCCTTGCCCACCGCGTGAATTATGCTGCGATCCGGTCGGTTAACGGCTACGCGGGGATAGTATTCATAACGATTCCTCa                             >  2:680639/3‑238 (MQ=255)
                                                                                                                                                                                                                      aCGTTTTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCAcc                           <  1:749655/239‑1 (MQ=255)
                                                                                                                                                                                                                        gTTCTGATTTCCCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAg                         <  1:1067249/239‑1 (MQ=255)
                                                                                                                                                                                                                          ccTGTTTTACCACTGCCCCATCCCCATATGGCCGCCACCACCGAAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGt                        <  1:605638/237‑1 (MQ=255)
                                                                                                                                                                                                                           cTGATTTACCAGTGGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCGTTGTATTCATAACGCTTCGTCACCAGTTg                      <  1:980933/239‑1 (MQ=255)
                                                                                                                                                                                                                               tttACCAGGGGCCCATACCCATATGACCGCCACCACCGCCGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTg                   <  1:154977/238‑1 (MQ=255)
                                                                                                                                                                                                                                   ccAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCa              <  1:701516/239‑1 (MQ=255)
                                                                                                                                                                                                                                        ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCACGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTCTTCATAACGATTCGTCACCAGTTGCTGTTCCAGTgc          >  2:362262/1‑238 (MQ=255)
                                                                                                                                                                                                                                              tacccataTGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGc                     >  1:498878/1‑221 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                              
CAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCG‑CATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCTTT  >  NC_000913/4201040‑4201516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A