Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F113 I1 R1
|
17 |
62.1 |
2245352 |
90.5% |
2032043 |
142.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
4,049,922 |
IS5 (–) +4 bp |
noncoding (24‑27/109 nt) |
spf → |
Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
3652036 = | NA (NA) | 77 (1.250) |
55/284 |
0.1 |
100% |
noncoding (1195/1195 nt) |
IS5 |
repeat region |
| ? | NC_000913 |
= 4049925 |
0 (0.000) | noncoding (27/109 nt) |
spf |
Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| * |
? |
NC_000913 |
= 3653230 | NA (NA) | 74 (1.200) |
61/284 |
0.0 |
100% |
noncoding (1/1195 nt) |
IS5 |
repeat region |
| ? | NC_000913 |
4049922 = |
0 (0.000) | noncoding (24/109 nt) |
spf |
Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3652177‑3652036
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTT < NC_000913/4049925‑4049784
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGCAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGACTCAGCCGCGACGAATTTCCCCGCCTATTCGCACCTTCCA > 2:226553/1‑143
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCACACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCA < 1:981287/143‑1
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGCAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTCATTCGCACCTTCCA > 2:597759/1‑143
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGAGAGAAAAAATCGGCGCAAACATGAAGAAATGAAATGACTGAGTCAACCGAGAAGAAATTGACGGCGTATTAGCACCTTCCA > 1:1096833/1‑143
TGGGGATAACGCCTTAAATGGCGAAGAAACGGCCGAAATAGGCTCATACATGGCATTTCCGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCCTATCCGCACCTTCCA > 1:161320/1‑143
ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAA < 1:792843/143‑1
ATAACGCCTTAAATGCCGAAGATACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGTCTCAGACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAA < 1:679963/143‑1
TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAAC < 1:612950/143‑1
GCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAAGGACTGAGTCAGCCGAGAAGAATTTCCACGATGAATCGCACCATCCATAGcagtacg > 2:30929/1‑136
CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGGGCAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTAC > 2:79951/1‑143
CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAGTGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCACAGAACATATTACCTCTGTAC > 2:119482/1‑143
GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACC > 1:735038/1‑143
GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACC > 1:922748/1‑143
ACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTATCTTACtc > 1:861159/1‑141
GGTCTGACTAGGCTCATTCAAGGGATTTACGGGAGAAAAAATCGGCTCACACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGA < 2:591714/143‑1
GTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGcc > 1:947138/1‑141
GTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCGTATTAGCACCTTCCATAGACCCGCCTACCCCTGTACCCCACGCGcc > 2:1027421/1‑141
TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGCCT > 1:636306/1‑143
TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACT > 1:710291/1‑143
AAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGccccac > 1:499705/1‑137
AATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACT < 2:731946/143‑1
GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACT > 1:1033172/1‑143
tgctgCAAGGCATTTACGTGAGAAAAAATCGGCGCAAACACGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCT < 2:293402/138‑1
TGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCc > 1:528421/1‑142
taCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGCATCACCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTT < 1:1003702/141‑1
AAGGCATTTACGGGAGCAAAAAGCTGCTGAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGGACATCTTACCTCTGTACACTCCGCGACTAACTTTACTCTTTTTTG > 2:681718/1‑143
AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTG > 1:1100683/1‑143
AGGCATTTACGGGAGAAGAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCACCGCTAATTCGCACCTTCCATAGAACATCTTACCTCTGCACCCTACGCGACTAACCTTACTCCTTTTGGT > 2:414591/1‑143
AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATGTCCCCGCCTATCCGAACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGT > 2:389719/1‑143
AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGGCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGGACATCTTACCGCTGTACCCTACCGGACTAACCTTGCCATCTTTTGT > 1:783611/1‑143
CATTTACGGGAGAAAAAATCGGCTCAAACAGGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCA < 1:711364/143‑1
TTACAGAAGAAAAAATCGGCTCAAACATGAAGAAATTATATGACTGAGTCGGCCGAGAAGAATTTCCCCGCTTATTCGCACCTGCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACCCTTTTTTGTTCAGTT < 1:342589/143‑1
ACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCA < 1:162173/143‑1
CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAG > 1:235405/1‑143
CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCCCTCTCCCCCCCGCCACCATCTTTACTCCTTTTTGTTCCGTTCAG > 2:1112170/1‑143
GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGA < 1:620592/143‑1
GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGACGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATCGAACATCTTCCCTCTCTACCCTACGCGACTTACTTTACTCTTTTTCGTTCAGTTCtgt > 1:284586/1‑140
GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAA < 2:735038/143‑1
GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAA > 2:107206/1‑143
GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCCGTTTAGActgc > 2:958465/1‑139
AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTACCTTTACTCTTTTTTGTTCAGTTCAGAAAGCA > 2:731872/1‑143
AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCA < 1:397926/143‑1
AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCGGAGGAGAATTTTCGTGCTTATTCGGACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACT > 1:498885/1‑143
AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACT > 1:173026/1‑143
TCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAATTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTT < 1:721235/143‑1
CGGCTCAACCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTG < 2:961127/143‑1
CTCAAACAGTAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTCTTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTGGTTCAGTTCAGAAAGCACTTTTTGTAA < 2:66945/143‑1
AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGACAGCACTTTTTGTAATTT > 2:281462/1‑143
AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTCTTTTGTTCCGCTCATACTGCACTCTCTGTAATTT > 2:377562/1‑143
TGAAGAAAGGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTTTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTT < 1:630180/143‑1
AAGAAATGGAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCA < 2:8859/143‑1
AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCA < 1:480975/143‑1
AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCA > 1:892831/1‑143
TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATA < 1:219637/143‑1
CTGAGTCAGCCGGGTATAATTTCCGCGCTGATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGA < 2:963584/143‑1
AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATT > 1:1017269/1‑143
ttgGCCGAGTAGAATTTCCCCGTTTATGCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGCTTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTC < 2:1075957/140‑1
ccGCCGACAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTACCTTTACTCTTTTTTGTTCCGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCT < 1:185012/141‑1
CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTTCTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCT < 2:617327/143‑1
AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTCCCTCTGTACCCTACGCGCCTAACTTTACTCCTTTTCGTTCACTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATGGGCATTTCTA > 2:187237/1‑143
GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGGACATCTTGCCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAA < 2:24444/143‑1
GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAACTTCTAA > 1:25860/1‑143
CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTATTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAAT < 2:725375/143‑1
CGAGAAGAATGTGCCCGCTTATTCGGACTTTCCATACAACATCTTACCCTTGTACCTTACGTGCCTAGCTTTCCTTTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATA < 2:284586/143‑1
AGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGC < 1:232218/143‑1
AGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGC < 2:36797/143‑1
AAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCA > 1:333284/1‑143
CCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCCGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACt > 2:478499/1‑142
CCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACG > 2:754233/1‑143
cgttgATTCGCACCTTCCATAGATCATCTTACCTCTGTACGCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGT < 2:124315/138‑1
TTCGCACCTTCCATAGCATCTCTTACCCCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGC < 1:119482/143‑1
GCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAACGCAGTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGGATTTCTACTAGCCATCCCTACACGTGACAGCTTA > 1:49156/1‑143
GCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTA > 2:213022/1‑143
CACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTAT < 2:903596/143‑1
CCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAAATTTAGTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGT < 1:207858/143‑1
CTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGCAGGCACGTTTTGCTTGTTGCTAACAGTTGTTGCATAGGAATTTCTACTAGCCATCACAAAACGTGACAGCTTATGTT < 2:235405/143‑1
CATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTTCTT > 2:163327/1‑143
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3652177‑3652036
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTT < NC_000913/4049925‑4049784
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
