Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F113 I2 R1
|
19 |
51.3 |
1830242 |
91.7% |
1678331 |
142.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
4,049,922 |
IS5 (–) +4 bp |
noncoding (24‑27/109 nt) |
spf → |
Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
3652036 = | NA (NA) | 66 (1.290) |
53/284 |
0.0 |
100% |
noncoding (1195/1195 nt) |
IS5 |
repeat region |
| ? | NC_000913 |
= 4049925 |
0 (0.000) | noncoding (27/109 nt) |
spf |
Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| * |
? |
NC_000913 |
= 3653230 | NA (NA) | 59 (1.160) |
50/284 |
0.1 |
100% |
noncoding (1/1195 nt) |
IS5 |
repeat region |
| ? | NC_000913 |
4049922 = |
0 (0.000) | noncoding (24/109 nt) |
spf |
Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3652171‑3652036
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTG < NC_000913/4049925‑4049787
TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAAC > 1:270957/1‑143
GCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCT < 1:261008/143‑1
TTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTAC < 1:489309/143‑1
GCGAAGAAACGGTCTAAATAGGCTGATTCAAGGAAATTACGGTAGGAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCCGTA > 2:651524/1‑143
GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGCAGAATTGCCCCGCTCGTTCGCACCTTCCATAGAACATCTTACCTCTGTTCC > 1:124802/1‑143
GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACC > 1:576728/1‑143
AAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCC > 1:450762/1‑143
gCGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGATATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGC < 2:61581/142‑1
ACGGTCTAAATAGTGTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGC < 2:618686/143‑1
TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGCAATGAAATGACTGAGTCAGCCGAGAAGAATCTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACT > 2:617035/1‑143
TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACT > 1:360781/1‑143
AAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAACTAAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAAC < 1:664828/143‑1
aagAGGCTAATTCAAGGCCTTTACGAGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACT < 1:164039/140‑1
atagcacGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTT < 1:784453/136‑1
gAGGGTGATTCAAGGCATTTACGGGAGAAAAAAGCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCGCTGTACCCTACGCGACTAACTTT < 2:18615/142‑1
GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTCACCTTACT > 2:200205/1‑143
GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACT > 1:128121/1‑143
CTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTC > 2:467781/1‑143
ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACGTGACTCTTT > 1:259418/1‑143
TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTT < 2:615498/143‑1
TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTT < 2:708557/143‑1
CAAGGCATTTACGGGAGAAAAACTCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTT < 2:725500/143‑1
AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGT > 1:817247/1‑143
AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTCTGc > 1:413691/1‑142
GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTC > 1:27001/1‑143
ACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAG > 2:702182/1‑143
GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGTCTGACTTTACTCTTATCTGTTGAGTTTAGt > 2:860785/1‑142
GAGAAACAATCGGCTCAAACATGAATAAACGAAATGCCTGAGTCAGCCGAGAAGAATTACCCCGCTTATTCGCACCTCCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAA < 2:280034/143‑1
GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGC > 2:75819/1‑143
TCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCCTATTCGCACCTTCCTTAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTT < 2:468053/143‑1
CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AA > 1:235699/1‑143
TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTCCCGTTCAGCAAGCACTGTTCTT‑AAT > 2:715214/1‑143
TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTGTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AAT > 1:88190/1‑143
CATGAAGAAATGCACTCACTGAGGCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTT < 2:475845/143‑1
TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTT < 1:837538/143‑1
AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTT < 1:467781/143‑1
AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTT < 1:243987/143‑1
AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTG > 1:402541/1‑143
ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGT > 2:711661/1‑143
ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCAT < 2:526021/143‑1
ATGACCGACTCAGCCGAGAACACTTCCCCCGCTTACTCGCACCTTCCATCGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTGGCAT < 2:527396/143‑1
ggacctAGTCAGCCGAGAAGGAGTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACCCGACTTACTTTTCTTTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAAATTTTTTTTCAGTTGTTGCAT < 2:328385/137‑1
TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATA < 1:711661/143‑1
TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATA < 1:519386/143‑1
CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCCGAAAGCCCTTTTTTT‑AATTTTTTTTTCTTTGCTGCGTAGGA > 2:816997/1‑143
TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTC < 1:877354/143‑1
CAGCCGAGAAGTATTTCCCCGCTTATTAGAATCTTGCATATAACATTTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCT < 2:225667/143‑1
GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTGCTAA > 2:214216/1‑143
GAGAAGAATTT‑CCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGC < 1:702182/143‑1
aatattcTCCCCGCTTATTCGCACCTTCCATAGAACACCTTACCTCTGTGTCTTGCACGCATAACTTTTCTTTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCA < 2:9311/136‑1
GAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTATAATAGCCATC > 2:619946/1‑143
AATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCA > 2:780393/1‑143
AATTTCCCCGATTATTCGCACTTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCA < 1:692800/143‑1
TCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAA < 1:523123/143‑1
CCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACACAAC > 2:317763/1‑143
CCCGCTTATTCGCACCTTCCATAGAACATATTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTATTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGATTTTCTACTAGACATTACAAAAa > 2:36305/1‑142
CCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACG > 1:801523/1‑143
CTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGA < 1:686911/143‑1
CTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGA < 2:817247/143‑1
ATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTCTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAG < 2:450762/143‑1
TTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGATCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGC < 1:907132/143‑1
TCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGCAAGCACTTTTTGT‑AA‑TTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTT > 1:406521/1‑143
CGCACCCTCCATAGAACATCGTACCTCTGTACCCGACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTT < 1:26746/143‑1
CACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACGCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTAT < 2:270957/143‑1
ACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATG < 1:552953/143‑1
TTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTG < 1:493807/143‑1
TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3652171‑3652036
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT‑AATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTG < NC_000913/4049925‑4049787
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
