Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F97 I1 R1
|
15 |
61.0 |
2236302 |
90.0% |
2012671 |
142.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
2,977,562 |
Δ33 bp |
coding (964‑996/1032 nt) |
galR → |
galactose‑inducible d‑galactose regulon transcriptional repressor; autorepressor |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
2977562 |
2977594 |
33 |
58 [0] |
[0] 58 |
galR |
galactose‑inducible d‑galactose regulon transcriptional repressor; autorepressor |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 2977561 | 0 (0.000) | 52 (0.870) |
47/276 |
0.2 |
100% |
coding (963/1032 nt) |
galR |
galactose‑inducible d‑galactose regulon transcriptional repressor; autorepressor |
| ? | NC_000913 |
2977595 = |
0 (0.000) | coding (997/1032 nt) |
galR |
galactose‑inducible d‑galactose regulon transcriptional repressor; autorepressor |
GATK/CNVnator alignment
N/A
