Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F999 I1 R1 225 156.4 11709729 83.8% 9812752 75.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,872,450 +G coding (338/387 nt) yidW ← regulator protein for dgo operon

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,872,4501.G98.0% 394.8 / 1.7 151coding (338/387 nt)yidWregulator protein for dgo operon
Reads supporting (aligned to +/- strand):  ref base . (3/0);  new base G (85/63);  total (88/63)
Fisher's exact test for biased strand distribution p-value = 2.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01

Only 100 of 165 total aligned reads displayed.

GTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCT‑CCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGT  >  NC_000913/3872375‑3872519
                                                                            |                                                                     
gTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCt                                                                        <  1:5595341/76‑1 (MQ=255)
gTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCt                                                                        <  1:5746600/76‑1 (MQ=255)
 tCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCtg                                                                       >  1:4497951/1‑75 (MQ=255)
 tCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCtg                                                                       >  1:1819043/1‑75 (MQ=255)
 tCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCtg                                                                       <  2:2886404/76‑2 (MQ=255)
  ccTGCTTGTTGGCAATCTTCTCTTTCCGCGCCGCTTCAATCTGCGCCAGATCGCTGGACGTCGCGCGCACTGCtgc                                                                      <  2:3449651/76‑3 (MQ=255)
  ccTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCtgc                                                                      >  2:2975954/1‑74 (MQ=255)
  ccTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCtgc                                                                      <  2:2822469/76‑3 (MQ=255)
  ccTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCtgc                                                                      <  1:1794416/76‑3 (MQ=255)
    tGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCT‑gccc                                                                   >  2:901114/1‑75 (MQ=255)
     gATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCT‑gccca                                                                  >  2:5810990/1‑74 (MQ=255)
     gATTGCTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCT‑gccca                                                                  >  2:2650470/1‑74 (MQ=255)
       ttgttgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAAc                                                                 >  1:1408186/1‑76 (MQ=255)
        tgttgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACg                                                                <  1:5555059/76‑1 (MQ=255)
        tgtggGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACg                                                                <  1:408637/76‑1 (MQ=255)
         gttgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACgg                                                               <  1:349188/76‑1 (MQ=255)
         gttgGCAATCATCTCGTTCAGAGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACgg                                                               <  1:881335/76‑1 (MQ=255)
          ttgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACggg                                                              >  2:1644144/1‑76 (MQ=255)
           tgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGc                                                             >  2:4396235/1‑76 (MQ=255)
           tgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGc                                                             >  2:4238784/1‑76 (MQ=255)
            ggCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCa                                                            >  2:4503040/1‑76 (MQ=255)
             gCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTTGAAGTCGCGCGCTCTGCTGCCCAACGTGCaa                                                           <  1:5836869/76‑1 (MQ=255)
             gCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCaa                                                           <  2:1465369/76‑1 (MQ=255)
             gCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGAGCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCaa                                                           >  2:586677/1‑76 (MQ=255)
              cAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCact                                                          >  2:2913924/1‑74 (MQ=255)
              cAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAAt                                                          >  1:3992257/1‑76 (MQ=255)
              cAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAAt                                                          <  1:2168474/76‑1 (MQ=255)
               catcatcTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATc                                                         <  1:5818050/75‑1 (MQ=255)
               aaTCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATc                                                         <  1:3257229/76‑1 (MQ=255)
                atcatcTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCg                                                        <  1:3593606/76‑1 (MQ=255)
                atcatcTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCg                                                        <  1:4752972/76‑1 (MQ=255)
                 tcatcTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGc                                                       >  1:4213631/1‑76 (MQ=255)
                  catcTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGcc                                                      >  2:2767689/1‑76 (MQ=255)
                   atcTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCg                                                     <  1:4986987/76‑1 (MQ=255)
                    tctcGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATcggcgg                                                    >  1:5490035/1‑76 (MQ=255)
                     ctcGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGt                                                   >  1:2954006/1‑76 (MQ=255)
                     ctcGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGt                                                   >  1:1236196/1‑76 (MQ=255)
                       cGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTc                                                 >  1:471095/1‑76 (MQ=255)
                        gTTCAGCGCCGATTCCATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTcc                                                >  1:4358032/1‑76 (MQ=255)
                        gTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTcc                                                <  1:6221/76‑1 (MQ=255)
                        gTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTcc                                                <  2:991495/76‑1 (MQ=255)
                        gTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTcc                                                >  1:1369559/1‑76 (MQ=255)
                           cAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTccacc                                             <  2:1218171/76‑1 (MQ=255)
                            aGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGGTccacca                                            >  2:5491076/1‑76 (MQ=255)
                             gcgcCTATTCAGTCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAg                                           <  2:5351366/76‑1 (MQ=255)
                             gcgcCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCACCGGGCAATCGCCGGTTCCACCAg                                           <  2:823416/76‑1 (MQ=255)
                               gcCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGAt                                         >  1:2024987/1‑76 (MQ=255)
                                 cGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGAttc                                       >  2:471507/1‑75 (MQ=255)
                                  gATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTc                                      >  2:3063598/1‑76 (MQ=255)
                                  gATTCAATCGGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTc                                      <  2:419127/76‑1 (MQ=255)
                                   aTTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCg                                     <  2:2706347/76‑1 (MQ=255)
                                   aTTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCg                                     >  2:2015599/1‑76 (MQ=255)
                                    ttCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGc                                    >  1:453865/1‑76 (MQ=255)
                                      cAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCAc                                  >  2:3919989/1‑76 (MQ=255)
                                         tCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGATGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTc                               <  2:5030460/76‑1 (MQ=255)
                                            gcgcCCGAGCGCTGGAAGTGGGTCGCTCTGCTGCGCAACGGTCACTCGCTTGTTCCACCATACTTCGCACTTCGCt                            <  2:3292731/76‑1 (MQ=255)
                                             cgcCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTc                           <  2:1408186/76‑1 (MQ=255)
                                             cgcCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTc                           <  1:2384320/76‑1 (MQ=255)
                                             cgcCAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCCCTc                           >  2:5574723/1‑76 (MQ=255)
                                               ccAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCAt                         <  1:2572600/76‑1 (MQ=255)
                                               ccAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCAt                         >  1:5270926/1‑76 (MQ=255)
                                                cAGATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATg                        <  2:2005993/76‑1 (MQ=255)
                                                  gATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGc                      >  1:2206703/1‑76 (MQ=255)
                                                  gATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCGCATGGc                      >  2:264617/1‑76 (MQ=255)
                                                  gATCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCAACAGCTTTCGCACTTCGCTCATGGc                      >  2:1900506/1‑76 (MQ=255)
                                                   aTCGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCa                     >  1:1268308/1‑76 (MQ=255)
                                                     cGCTGGAATTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACt                   <  1:3093551/76‑1 (MQ=255)
                                                     cGCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACt                   >  2:1121818/1‑76 (MQ=255)
                                                      gCTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTg                  >  1:3203217/1‑76 (MQ=255)
                                                       cTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGa                 <  1:3750728/76‑1 (MQ=255)
                                                       cTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCCCATGGCACTGa                 >  2:5687695/1‑76 (MQ=255)
                                                       cTGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGCTCCACCAGATTTCGCACTTCGCTCATGGCACTgt                 >  2:3630530/1‑75 (MQ=255)
                                                       cTGGAAGTCGCGAGCTCTGCTGCCCAACGGGCAATAGAAGGGTCCACGACATTTCGCACATCGATGATGGGACTGa                 >  1:4229813/1‑76 (MQ=255)
                                                        tGGAAGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGAt                >  2:4067267/1‑76 (MQ=255)
                                                         ggAAGTCGCGCGCTATGCTGCCCAACGGGCAATCCCCGGTTCCATCAGATGTCGCACTTCGCTCATGGCACTGATa               >  2:1330392/1‑76 (MQ=255)
                                                          gAAGTCGCGCGCTCTGCTGCCCAACGGGCAGTCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATaa              <  2:2273991/76‑1 (MQ=255)
                                                           aaGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAg             <  1:2955642/76‑1 (MQ=255)
                                                           aaGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAg             <  2:1776350/76‑1 (MQ=255)
                                                            aGTCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCAc                                  <  1:4472745/54‑1 (MQ=255)
                                                              tCGCGCGCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCg          <  2:1443676/76‑1 (MQ=255)
                                                               cgcgcgCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGt         <  2:5112002/76‑1 (MQ=255)
                                                               cgcgcgCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGt         <  1:5647029/76‑1 (MQ=255)
                                                               cgcgcgCTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACCTCGCTCATGGCACTGATAAGCCgc         >  2:2331670/1‑75 (MQ=255)
                                                               cgcgcgCTCAGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTTCCTCATGGCACTGATAAGCCGt         >  2:5219619/1‑76 (MQ=255)
                                                                gcgcgcTCTGCTGCCCAACGGGCACTCGCCGGTTCCACCCGATTTCGAACTTCGCTCATGGCCCTGATAAGCCTTg        >  1:2551495/1‑76 (MQ=255)
                                                                gcgcgcTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTg        >  2:1822690/1‑76 (MQ=255)
                                                                gcgcgcTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTg        >  2:74187/1‑76 (MQ=255)
                                                                 cgcgcTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTgg       <  1:3583954/76‑1 (MQ=255)
                                                                 agcgcTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCCCTCATGGCACTCAGAAGCCGTgg       >  2:2991653/2‑76 (MQ=255)
                                                                  gcgcTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTggg      >  1:4893270/1‑76 (MQ=255)
                                                                  gcgcTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTggg      >  2:3056078/1‑76 (MQ=255)
                                                                   cgcTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGt     >  1:751901/1‑76 (MQ=255)
                                                                    gcTCTGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTc    <  1:19621/76‑1 (MQ=255)
                                                                    gcTCTGCTGCCCAACAGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTc    <  2:4017419/76‑1 (MQ=255)
                                                                     ctctGCTGCCCCACGGGCAATCGCCGGTTCCACCCGATTTCGCACTTCGCTCATGGCACTGATACGCCGTGGGTCg   >  2:4581350/1‑76 (MQ=255)
                                                                      tctGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGt  >  2:4128672/1‑76 (MQ=255)
                                                                      tctGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGt  >  1:2816352/1‑76 (MQ=255)
                                                                      tctGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGt  >  1:4731933/1‑76 (MQ=255)
                                                                      tctGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGt  >  2:3433722/1‑76 (MQ=255)
                                                                      tctGCTGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGt  >  2:2194056/1‑76 (MQ=255)
                                                                            |                                                                     
GTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCT‑CCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGT  >  NC_000913/3872375‑3872519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A