Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A5 F1 I2 R1 | 772 | 77.0 | 3769570 | 91.6% | 3452926 | 105.3 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,164,998 | G→A | *241* (TAG→TAA) | baeR → | response regulator in two‑component regulatory system with BaeS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,164,998 | 0 | G | A | 97.6% | 265.3 / ‑1.4 | 82 | coding (723/723 nt) | baeR | response regulator in two‑component regulatory system with BaeS |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (40/40); minor base . (1/1); total (41/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
TAACCGACCGCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGG > NC_000913/2164862‑2165133 | taACCGACCGCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAAtt > 2:1649372/1‑139 (MQ=255) cgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGAc > 1:1748142/1‑139 (MQ=255) cgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGAc > 1:1726712/1‑139 (MQ=255) gCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACa < 2:1726712/139‑1 (MQ=255) cACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAGTCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAAGTTTAGCGACat > 2:1228049/1‑139 (MQ=255) tCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTAttt > 1:1291822/1‑139 (MQ=255) acaTTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCg > 2:735918/1‑139 (MQ=255) caTTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAg > 1:252651/1‑118 (MQ=255) caTTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAg < 2:252651/118‑1 (MQ=255) caTTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCgg < 2:1291822/139‑1 (MQ=255) aaaaaCCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGAt < 2:1748142/139‑1 (MQ=255) aaaaCCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg < 1:735918/139‑1 (MQ=255) cTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGtt < 2:1372470/139‑1 (MQ=255) cgcggcAAGCTGGAATCTCTTGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGGCGGAGATGGCGTTCAg > 2:1277548/1‑139 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTTGGTTACCGCTGGGAAGCTGACGCCTGCCGCATCGTTTAATTTTAGCGa > 2:409670/1‑108 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAg > 1:231961/1‑105 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAg < 2:231961/105‑1 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg < 1:1529208/131‑1 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg < 2:409260/131‑1 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg < 2:1062150/131‑1 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg > 2:1529208/1‑131 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg > 1:1062150/1‑131 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg < 1:641782/131‑1 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg > 2:641782/1‑131 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg > 1:409260/1‑131 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAg > 2:163706/1‑139 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAg > 2:1093991/1‑139 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAg > 2:216180/1‑139 (MQ=255) cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCACATCGTTTAATTTTAGCGa < 1:409670/108‑1 (MQ=255) aaGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg < 1:1239066/125‑1 (MQ=255) aaGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg > 2:1239066/1‑125 (MQ=255) aTCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCTTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCaa < 1:1719351/139‑1 (MQ=255) ctcGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCgg > 2:1752885/1‑132 (MQ=255) ctcGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCgg < 1:1752885/132‑1 (MQ=255) aCGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAg > 1:1284819/1‑83 (MQ=255) aCGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAg < 2:1284819/83‑1 (MQ=255) ccAGTCCTTTTTCCCGCGCCGTTTAT‑GCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCAt < 2:380563/138‑1 (MQ=255) tttAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg < 2:712399/95‑1 (MQ=255) tttAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATg > 1:712399/1‑95 (MQ=255) tAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑Caa > 1:1138685/1‑139 (MQ=255) gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAAtttt > 1:590516/1‑60 (MQ=255) gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAAtttt < 2:590516/60‑1 (MQ=255) gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAAc > 1:152894/1‑136 (MQ=255) gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAAc < 2:152894/136‑1 (MQ=255) gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGa > 2:448962/1‑139 (MQ=255) gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGa > 2:128347/1‑139 (MQ=255) gcgcCGTTTATGCCG‑CCGTTACCGCCGGGAAGCCCGCCCCTGGCGGCTCGGTTTATTTTAGCCGCATTATTTTGTTTGGCGGGGGTTGCGGTCAGACCAGATCCGGCAAAATTTATCCACGCAAGGTCAGCCAAACTgt > 1:380563/1‑138 (MQ=255) gcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTA‑ATTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGa < 1:83446/94‑1 (MQ=255) gcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTA‑ATTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGa > 2:83446/1‑94 (MQ=255) cGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACAtt < 2:322564/139‑1 (MQ=255) aTGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTAtctc > 2:1079949/1‑139 (MQ=255) gCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACa > 1:913383/1‑100 (MQ=255) gCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACa < 2:913383/100‑1 (MQ=255) gTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCgg < 1:1710230/93‑1 (MQ=255) gTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCgg > 2:1710230/1‑93 (MQ=255) gTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGc > 2:1263394/1‑139 (MQ=255) gTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGc > 1:431532/1‑139 (MQ=255) cGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGccc > 1:387073/1‑139 (MQ=255) tACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTggc < 1:1649372/139‑1 (MQ=255) gggAAGCCGACGCCTGCCGCATCGTTTAATTTTAg > 1:530000/1‑35 (MQ=38) gggAAGCCGACGCCTGCCGCATCGTTTAATTTTAg < 2:530000/35‑1 (MQ=255) ggAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATcc < 1:792247/90‑1 (MQ=255) ggAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATcc > 2:792247/1‑90 (MQ=255) ggAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATc > 1:719348/1‑89 (MQ=255) ggAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATc < 2:719348/89‑1 (MQ=255) gCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGaaa < 1:448962/139‑1 (MQ=255) ccGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGaaaa < 1:1317856/139‑1 (MQ=255) cGACGCCTGCCGCATCGTTCAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAATATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAAt < 1:1228049/139‑1 (MQ=255) gCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCt < 1:163706/139‑1 (MQ=255) ccTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTc < 1:1297424/139‑1 (MQ=255) ccGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGtt > 1:1191036/1‑50 (MQ=255) ccGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGtt < 2:1191036/50‑1 (MQ=255) ccGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGtt > 1:1629185/1‑50 (MQ=255) ccGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGtt < 2:1629185/50‑1 (MQ=255) ccGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACa < 2:418578/69‑1 (MQ=255) ccGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACa > 1:418578/1‑69 (MQ=255) ccGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACAt < 2:104033/70‑1 (MQ=255) ccGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACAt > 1:104033/1‑70 (MQ=255) cGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACt < 1:216180/139‑1 (MQ=255) cATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACttt > 1:198679/1‑139 (MQ=255) cGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAAt < 2:387073/139‑1 (MQ=255) ttAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCgg < 1:1277548/139‑1 (MQ=255) ttAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCgg < 1:1019034/139‑1 (MQ=255) | TAACCGACCGCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTAT‑CCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAG‑CAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGG > NC_000913/2164862‑2165133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |