Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A9 F1 I1 R1 759 71.0 3673240 91.5% 3361014 104.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 427,675 A→G Y10C (TAC→TGC)  secD → SecYEG protein translocase auxillary subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913427,6750AG100.0% 245.3 / NA 68Y10C (TAC→TGC) secDSecYEG protein translocase auxillary subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (34/34);  total (34/34)

TGACACCACTGAAGTAGTTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGT  >  NC_000913/427544‑427804
                                                                                                                                   |                                                                                                                                 
tGACACCACTGAAGTAGTTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCg                                                                                                                                 >  2:141882/1‑134 (MQ=255)
tGAAACCCCTGAGCTAGTTATTAAGCGTGACGTCGTAGCTGCCTTCCTGCCGAAAGGCACCATGAATGAGCTGTAAGTAAAATTTTTCCCTAAGGGAATTGCCGTATTAAACCCTTATCCATTGGGAAAGTGCGTCATg                                                                                                                            <  1:901294/139‑1 (MQ=255)
   caccacTGAAGTAGTTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTg                                                                                                                         >  1:1399256/1‑139 (MQ=255)
        cTGAAGTAGTTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCgt                                                                                                                    >  2:61560/1‑139 (MQ=255)
             gtagtTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGAt                                                                                                                       <  1:688080/131‑1 (MQ=255)
             gtagtTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGAt                                                                                                                       >  2:688080/1‑131 (MQ=255)
                gtTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTg                                                                                                            >  2:1116442/1‑139 (MQ=255)
                gtTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTg                                                                                                            >  2:588744/1‑139 (MQ=255)
                   attaAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCa                                                                                                         >  2:131466/1‑139 (MQ=255)
                   attaAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCa                                                                                                         >  1:913181/1‑139 (MQ=255)
                     taAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATc                                                                                                       >  2:54665/1‑139 (MQ=255)
                        aCGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGt                                                                                                    >  1:1825023/1‑139 (MQ=255)
                           tGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTctg                                                                                                 >  1:1715945/1‑139 (MQ=255)
                                 cGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTAt                                                                                           >  2:247815/1‑139 (MQ=255)
                                  gTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATg                                                                                          <  2:1825023/139‑1 (MQ=255)
                                   tAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATgc                                                                                         <  1:247815/139‑1 (MQ=255)
                                     gCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATgcgc                                                                                       <  2:1715945/139‑1 (MQ=255)
                                      cTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATc                                                                                                                      <  2:510529/107‑1 (MQ=255)
                                      cTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATc                                                                                                                      >  1:510529/1‑107 (MQ=255)
                                        gCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTc                                                                                    <  2:165620/139‑1 (MQ=255)
                                        gCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTc                                                                                    >  2:1273167/1‑139 (MQ=255)
                                             ccTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAAc                                                                               <  2:1399256/139‑1 (MQ=255)
                                                 ccGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCg                                                                                                                                 >  1:328802/1‑85 (MQ=255)
                                                      aGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTctg                                                                                                 >  1:282028/1‑112 (MQ=255)
                                                      aGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTctg                                                                                                 <  2:282028/112‑1 (MQ=255)
                                                           ccATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGa                                                                 <  1:1273167/139‑1 (MQ=255)
                                                             aTGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATc                                                               >  2:1288139/1‑139 (MQ=255)
                                                                aaGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCgg                                                            <  1:1145995/139‑1 (MQ=255)
                                                                      cTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCg                                                                                                                                 <  1:513226/64‑1 (MQ=255)
                                                                      cTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCg                                                                                                                     <  1:851712/76‑1 (MQ=255)
                                                                      cTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCg                                                                                                                     >  2:851712/1‑76 (MQ=255)
                                                                      cTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTa                                                                                            >  1:489411/1‑101 (MQ=255)
                                                                      cTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTa                                                                                            <  2:489411/101‑1 (MQ=255)
                                                                      cTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCgg                                                            <  1:1273390/133‑1 (MQ=255)
                                                                      cTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCgg                                                            >  2:1273390/1‑133 (MQ=255)
                                                                      cTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTc                                                      >  2:1165919/1‑139 (MQ=255)
                                                                       tGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCa                                                     <  1:131466/139‑1 (MQ=255)
                                                                                      tCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTgcgcg                                      <  1:705628/139‑1 (MQ=255)
                                                                                         cTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGt                                                                      >  1:775982/1‑104 (MQ=255)
                                                                                         cTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGt                                                                      <  2:775982/104‑1 (MQ=255)
                                                                                            aGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGt                                <  1:588744/139‑1 (MQ=255)
                                                                                                  ttGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCa                                                                                                         <  2:968130/60‑1 (MQ=255)
                                                                                                  ttGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCa                                                                                                         >  1:968130/1‑60 (MQ=255)
                                                                                                  ttGCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTcgccgc                          >  2:1512567/1‑139 (MQ=255)
                                                                                                  ttGCCATGTTAAACCGTTATCCTTTGTGGAAGTGCGt                                                                                                                                >  2:905444/1‑37 (MQ=255)
                                                                                                  ttGCCATGTTAAACCGTTATCCTTTGTGGAAGTGCGt                                                                                                                                <  1:905444/37‑1 (MQ=255)
                                                                                                    gCCGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGccacca                        <  2:1007315/139‑1 (MQ=255)
                                                                                                      cGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGttt                                                                         <  2:153357/88‑1 (MQ=255)
                                                                                                      cGTGTTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGttt                                                                         >  1:153357/1‑88 (MQ=255)
                                                                                                         gtTAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCAC‑GGTGCGCGCGGAGTCGCCGCCAGTGAGc                  <  1:1116442/139‑1 (MQ=255)
                                                                                                           tAAACCGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCa                 <  1:1165919/139‑1 (MQ=255)
                                                                                                               ccGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCa                 <  2:410412/135‑1 (MQ=255)
                                                                                                               ccGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCa                 >  1:410412/1‑135 (MQ=255)
                                                                                                               ccGTTATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACg             <  1:54665/139‑1 (MQ=255)
                                                                                                                  ttATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGt                                                                                                    >  2:351978/1‑49 (MQ=255)
                                                                                                                  ttATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGt                                                                                                    <  1:351978/49‑1 (MQ=255)
                                                                                                                  ttATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTccc                                                                                  >  1:793888/1‑67 (MQ=255)
                                                                                                                  ttATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTccc                                                                                  <  2:793888/67‑1 (MQ=255)
                                                                                                                  ttATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCa                                                     <  1:1700898/96‑1 (MQ=255)
                                                                                                                  ttATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCa                                                     >  2:1700898/1‑96 (MQ=255)
                                                                                                                  ttATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGa                                  >  1:467794/1‑115 (MQ=255)
                                                                                                                  ttATCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGa                                  <  2:467794/115‑1 (MQ=255)
                                                                                                                     tCCTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATc       <  1:1512567/139‑1 (MQ=255)
                                                                                                                       cTTTGTGGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCa     <  2:1267954/139‑1 (MQ=255)
                                                                                                                          tgtgGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTgcgcg                                      <  1:1265887/103‑1 (MQ=255)
                                                                                                                          tgtgGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTgcgcg                                      >  2:1265887/1‑103 (MQ=255)
                                                                                                                          tgtgGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGt  >  1:1316852/1‑139 (MQ=255)
                                                                                                                          tgtgGAAGTGCGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGt  >  2:1379830/1‑139 (MQ=255)
                                                                                                                                   |                                                                                                                                 
TGACACCACTGAAGTAGTTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAATTAAAATTTTTCCCTAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGT  >  NC_000913/427544‑427804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A