Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F1 I1 R1
|
770 |
68.5 |
3470224 |
91.7% |
3182195 |
103.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
2,614,614 |
Δ3 bp |
coding (681‑683/849 nt) |
focB → |
putative formate transporter |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
2614614 |
2614616 |
3 |
76 [0] |
[0] 76 |
focB |
putative formate transporter |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 2614613 | 0 (0.000) | 76 (1.140) |
59/200 |
0.0 |
100% |
coding (680/849 nt) |
focB |
putative formate transporter |
| ? | NC_000913 |
2614617 = |
0 (0.000) | coding (684/849 nt) |
focB |
putative formate transporter |
GATK/CNVnator alignment
N/A
