Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
773 |
79.9 |
4112934 |
92.2% |
3792125 |
104.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
369,076 |
A→G |
K156E (AAA→GAA) |
mhpA → |
3‑(3‑hydroxyphenyl)propionate hydroxylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 369,076 | 0 | A | G | 100.0%
| 273.8
/ NA
| 76 | K156E (AAA→GAA) | mhpA | 3‑(3‑hydroxyphenyl)propionate hydroxylase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (38/38); total (38/38) |
GTAACGCCTTTATTCAGCCGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGAAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGATTGTGGTA > NC_000913/368942‑369210
|
gTAACGCCTTTATTCAGCCGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAAc < 1:48569/139‑1 (MQ=255)
gTAACGCCTTTATTCAGCCGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAAc < 1:1560822/139‑1 (MQ=255)
aGCCGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCg > 1:300138/1‑139 (MQ=255)
ccGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAAc < 1:847672/122‑1 (MQ=255)
ccGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAAc > 2:847672/1‑122 (MQ=255)
ccGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCggg > 2:467405/1‑139 (MQ=255)
ggTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATa > 2:611824/1‑139 (MQ=255)
aTGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCaa > 1:1397682/1‑139 (MQ=255)
aTGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCAAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCaa > 2:921652/1‑139 (MQ=255)
gATGCTGGAAGGGGTGTCGCATTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAg < 2:1522419/139‑1 (MQ=255)
aTGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGt < 1:467405/139‑1 (MQ=255)
gAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAAt < 1:1942963/119‑1 (MQ=255)
gAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAAt > 2:1942963/1‑119 (MQ=255)
aaGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGt > 2:262454/1‑139 (MQ=255)
ggTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGcc > 1:389013/1‑139 (MQ=255)
ggTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGcc > 1:549912/1‑139 (MQ=255)
gtgtCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAggg > 2:1770304/1‑102 (MQ=255)
gtgtCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAggg < 1:1770304/102‑1 (MQ=255)
tCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCtgtg > 1:1639150/1‑139 (MQ=255)
tCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCtgtg < 2:1397682/139‑1 (MQ=255)
gTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACgg < 1:262454/139‑1 (MQ=255)
tttCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAggg > 1:1476651/1‑93 (MQ=255)
tttCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAggg < 2:1476651/93‑1 (MQ=255)
cgcTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATTACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCAGGAAATAGTCAAAGCCCAGTGGCTgg < 1:2039929/112‑1 (MQ=255)
cgcTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACgg < 2:296822/73‑1 (MQ=255)
cgcTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACgg > 1:296822/1‑73 (MQ=255)
cgcTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGaaa > 2:1705113/1‑91 (MQ=255)
cgcTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGaaa < 1:1705113/91‑1 (MQ=255)
cgcTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTgg > 2:2039929/1‑112 (MQ=255)
cgcTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTg > 1:1577273/1‑139 (MQ=255)
cgcTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTg > 1:14322/1‑139 (MQ=255)
cgcTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTg > 2:1220169/1‑139 (MQ=255)
gctTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCg < 2:536621/139‑1 (MQ=255)
ctTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGt > 2:2013155/1‑139 (MQ=255)
tGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCg < 1:2026307/139‑1 (MQ=255)
tGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCg < 2:549912/139‑1 (MQ=255)
gTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGc > 1:965325/1‑139 (MQ=255)
tttCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCAc < 2:14322/139‑1 (MQ=255)
cTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCa > 1:1942407/1‑83 (MQ=255)
cTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCa < 2:1942407/83‑1 (MQ=255)
ggCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGttt < 1:1220169/139‑1 (MQ=255)
gCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTg < 1:611824/139‑1 (MQ=255)
ttCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCa < 1:1046560/67‑1 (MQ=255)
ttCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCa > 2:1046560/1‑67 (MQ=255)
ttCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAg > 2:1917477/1‑139 (MQ=255)
agCAAGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAAc > 1:1119918/1‑139 (MQ=255)
aGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTgcg < 1:809399/139‑1 (MQ=255)
aGATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTgcg < 2:392531/139‑1 (MQ=255)
gATGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTgcgc > 2:1227647/1‑139 (MQ=255)
tGACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCa < 1:2013155/139‑1 (MQ=255)
gACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTgcgc > 2:335663/1‑136 (MQ=255)
gACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTgcgc < 1:335663/136‑1 (MQ=255)
gACGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGCAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCaa > 1:74198/1‑139 (MQ=255)
cGAAGTGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAAt > 1:1141789/1‑139 (MQ=255)
tGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCa < 1:57787/52‑1 (MQ=255)
tGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCa > 2:57787/1‑52 (MQ=255)
tGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTg < 2:74198/139‑1 (MQ=255)
tGACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTg > 2:24438/1‑139 (MQ=255)
gACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGttt < 1:1400708/112‑1 (MQ=255)
gACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGttt > 2:1400708/1‑112 (MQ=255)
gACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTgg > 2:940328/1‑139 (MQ=255)
gACCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTgg > 1:1478392/1‑139 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCg > 2:1673518/1‑92 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCg < 1:1673518/92‑1 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGa < 2:1706135/139‑1 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGa < 2:300138/139‑1 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGa < 2:1478392/139‑1 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGa < 2:133818/139‑1 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGa < 2:1119918/139‑1 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGa < 1:84548/139‑1 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGa > 1:133818/1‑139 (MQ=255)
aCCTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGa < 1:1077200/139‑1 (MQ=255)
cTTGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGAtt < 1:1227647/139‑1 (MQ=255)
tGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTc > 2:1524176/1‑87 (MQ=255)
tGCACCTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTc < 1:1524176/87‑1 (MQ=255)
ccTGGAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGATTGTGGTa > 2:660484/1‑139 (MQ=255)
|
GTAACGCCTTTATTCAGCCGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGAAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGATTGTGGTA > NC_000913/368942‑369210
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
