Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
185 |
118.8 |
2757226 |
85.6% |
2360185 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,449,045 |
T→G |
20.4% |
intergenic (+3/+77) |
chpB → / ← ppa |
toxin of the ChpB‑ChpS toxin‑antitoxin system/inorganic pyrophosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,449,045 | 0 | T | G | 20.4%
| 169.9
/ 11.2
| 81 | intergenic (+3/+77) | chpB/ppa | toxin of the ChpB‑ChpS toxin‑antitoxin system/inorganic pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base T (12/50); new base G (17/2); total (29/52) |
| Fisher's exact test for biased strand distribution p-value = 4.66e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAA > NC_000913/4448810‑4449282
|
ttAATCAACTGGGAATGGCGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGgtgtg < 1:540124/239‑1 (MQ=255)
ttAACCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGgtgtg < 1:403375/239‑1 (MQ=255)
cGCTGGTGGCCCCCAATTCGCATGGACGAAATTTTGCCCGTTATGGCGGATGTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCa < 1:1029873/238‑1 (MQ=255)
agCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCa < 1:700220/237‑1 (MQ=255)
tggtggCCCCCATTTCGCGGGGCGGAAATTTTGCCCGTTATTCCGGATTTAGCGTTCCGTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATaaa < 1:956172/239‑1 (MQ=255)
gtggCCCCCTTTTCGTAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGGTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAAGCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATaaaaa < 2:281020/239‑1 (MQ=255)
tgCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATaaaaaaa < 1:685300/238‑1 (MQ=255)
cAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGCCGGTGGTGGAATAAGGTGTGTTTTTTTATTTCTGGCCTAAAAAAACCCT‑TCCTAACCg > 1:815656/1‑239 (MQ=255)
ggCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATTAGTGGGTGGAAAAGGCGCTATTACGCTTGCAGGCGGGGGGGGAATAAGGGGGGTTTTTTTTTCGCGGGGTAAAAAAAACCCC‑Taaaaaaagaa > 2:1089564/1‑229 (MQ=255)
ggCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGGGTGTTTATTTTTCCCGGGGCTAAAAAAACCCT‑TCCTAACCaaa > 1:370573/1‑238 (MQ=255)
ggCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGGGGAAGAGGCGTTATTACGCTTGCAGGCGGGGGGGGGACAAGGGGGGTTTTTTTTTTTGGGGGAACAAAAAACCCC‑TAATAAcagcg > 2:1294902/1‑234 (MQ=255)
ggCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGAGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGCATAAAGGGGGTTTATTTATCGCGGGCATAAAAAAACCCT‑TCCTAACCGaa > 1:962381/1‑238 (MQ=255)
gCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGGTGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGGGGGGGGAGAAGGGGGGTTTTTTTTATGCGGGCCTAAAAAAAACCC‑TACAAACCGAA‑g > 2:884565/1‑238 (MQ=255)
gCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGGGGGATAAGGTGTGGTTGTTTTTTGCGGGGCTAAAAAAACCCT‑TACTACCCCAA‑g > 1:807961/1‑238 (MQ=255)
tttGCCCGTTTTGGCGGGTTTGGCGTGCCGTT‑ACGGTGGGAGGGAGGCGATGTGC‑CCGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGAGCTACCCGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGtt < 2:484873/239‑1 (MQ=255)
tttGCCCGTTATGTCGTGTTTAGCGTTTCTTTCACTTTG‑GAAGAAGGCGATGTGC‑CAGGCGGGGTGGTGGTGGATCTGGTGCGGATGATGGATCTGCACGCCCGGCTGGCAATGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGtt < 2:286533/239‑1 (MQ=255)
tttGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTTAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGtt < 1:1089564/239‑1 (MQ=255)
tttGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGtt < 1:1369572/239‑1 (MQ=255)
tttGCCCGTTAGGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGtt < 1:1070410/239‑1 (MQ=255)
tATGCCGGATTGAGCGTTCCTTT‑ACATGGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGCGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGttat < 1:330520/239‑1 (MQ=255)
ttgggTTCCTTT‑GCATGGCGAAGAAGGTGAT‑TGCAACGGGGTGGGGTCTGTGATTCAGGTGCGGATGATGGATCTGCCCGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCagaag < 2:504824/235‑1 (MQ=255)
tccttccttt‑tccttGGCAAGAAAGCGATTTTG‑CCGGCGTGGTGATGGTGGATCAGGTGCGGATGTGGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 2:135198/236‑1 (MQ=255)
gggTTTCTTT‑TCATTGGCGAGAGGGCGATGTGC‑ACGGGGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGGAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 2:807961/237‑1 (MQ=255)
gctttCCTTT‑ACATGGCGAAGAAGGCGATGGGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGGCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 1:231229/236‑1 (MQ=255)
gCGTTCCTTT‑ACATTGCGAAGAAGGCGATGGGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACCCGCCCGGCTGGCAATGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 1:884565/239‑1 (MQ=255)
gCGTTCCTTT‑ACATTGCGAAGAAGGCGATGGGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 1:1214907/239‑1 (MQ=255)
cagccTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 1:831289/234‑1 (MQ=255)
cTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGGGTTTATTTATCGCGGGCATAAAAAAAACCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGGTATTACGCCAGAAGAACctatt > 1:849657/1‑239 (MQ=255)
tGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGGGTGTTTATTTATCGCGGGCATAGAAAAACCCT‑TACTAACCCAA‑GCCC‑GGGGTTCAGGGGTATTACGCCAGAAGAAATTCtttttttttt > 1:414890/1‑239 (MQ=255)
cGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGGGGAATAAGGGGTGTTTATTTATTTCGGGCATAAAAAAACCCT‑TACTAACCGAA‑ACCC‑GGGGCTCCGGGGTTTTACCCCCAAAAAACtttttttatttttgg > 2:879068/1‑230 (MQ=255)
cGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGGGGAATAAGGGGGGTTTATTTATTGCGGGCATAAAAAAACCCT‑TACTAACCAAA‑GGCC‑GGCGTTCAGGGTTATTAAGCCAGAAGAACTTATTTATTCTTTgc > 1:8319/1‑239 (MQ=255)
cGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGGGGAATAAGGGGGGGTTATTTATACCGGGGATAAAAAAACCCT‑TACTAACCGAA‑ACCC‑GGGGTTCAGGGGTATTACGCCAAAAAAAATATATTATTTTTTgg > 2:858013/1‑238 (MQ=255)
cGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGGGGGGGAATAAGGTGGTGTTATTTTTCGCGGGCCTATAAAAACCCT‑TACTAACCAAA‑ACCCGGGCGTCGGGGGTTTTTACCCAAAAAAAATTTTTTTTTTCtat > 2:831289/1‑236 (MQ=255)
aagaagGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTgcg < 1:526194/238‑1 (MQ=255)
aagGCGATTGGC‑ACGGCGGTGTGCTGGTTAATCGGGTGCGGGTGATGGATCTGCCCGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTgcgcgc < 2:179070/238‑1 (MQ=255)
gCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGGATAAGGGGTGGTTATTTATCGCGGGCATAAAAAAACACT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGGTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCCCGa > 1:1168234/1‑239 (MQ=255)
gCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 1:433903/215‑1 (MQ=255)
gtgC‑ACGCCGGTGTGCTGGGGAATGAGGTGCGGGGGAGGGATCTACCCGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAaggag < 2:294100/239‑1 (MQ=255)
aCGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCa < 1:858013/238‑1 (MQ=255)
tgCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGGGGGTTTATTTATCGCGGGCCTAAAAAAACCCT‑TACTCACCCAA‑GCCC‑GGCGGTCAGGGGTATTACGCCAAAAGAACTTATTTATTCTTTGCCCGCCCGACGGAGGCCACGATTTCa > 1:660039/1‑238 (MQ=255)
gTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTtcg > 1:703820/1‑209 (MQ=255)
gTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTgcg < 2:703820/209‑1 (MQ=255)
tCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGGATAAGGGGGGGTTTTTTATCGCGGGGCTAAAAAAACCCT‑TACTAAACGAACCCCC‑GGGGTTC‑GGGTTTTTACCCCCAAAGAACTTTTTTTTTCTTTCGCCCCCCGAAGGAGGCAACGATTTAAACTTTAGCggg > 2:715100/1‑238 (MQ=255)
tGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAACGGC‑TTCTg > 1:848864/1‑239 (MQ=255)
tGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGGGGGTTTATTTATCGCCGGCATAAAAAAACCCT‑TACTAAACGAA‑CCCC‑GGCGGTCAGGGTTTTTACCCCCGAAAAAATTTTTTTTTCTTTTCGGCCCCCAAGAGGGCAAACATTTCACCttttaaggtttttg > 2:501215/1‑228 (MQ=255)
tGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGGGGAATAAGGGGGGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTTCGCGCTCGAAGGAGGCAACCAATTTAACTTTTACGGC‑TTTTg > 1:1108071/1‑239 (MQ=255)
gatgatGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 1:1009741/178‑1 (MQ=255)
atgGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTcc < 1:421042/239‑1 (MQ=255)
tgGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTcc < 1:1025546/238‑1 (MQ=255)
cacGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGGGGTGGGATAAGGGGGGTTTATTTATCGCGGGCCTAAAAAAACCCT‑TACTAACCGAA‑GGCC‑GGCGTTCAGGGGTATTTAGCCCAAAAAAATTATTTATTTTTTTCGCGCTCGGAGAGGGGAAACACTTCAACTTTATCGGCTTTTTGGG‑TTTTCCCaccttaa > 2:1106850/1‑233 (MQ=255)
ccGCCCGGCGGGCAAGGCGTTTTTGTCTGGGTGGGGGTGAGGTGGGGGAAGAGGCTTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCATCCTTCaa < 2:1233059/238‑1 (MQ=255)
cGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTAAGCCAGAAGAACTTATTTATTCTTTTCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAACGGC‑TTCTGCG‑TTTTCCCAACCTTCa > 1:238405/1‑237 (MQ=255)
gCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGGGGAATAAGGGGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAAAAGAACTTATTTATTTTTTGCGCGCCCGCAGGAGGCAACGATTTCAGCTTTTGCGGC‑CTTTGCGTTTTTCCCACCCTTC‑ACTTTCa > 2:898659/1‑238 (MQ=255)
ttggcTGGCGGCGGGTGGGGGGGTGGAAGGGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAACCCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTc < 2:849657/235‑1 (MQ=255)
ttgTCTGGCTGCGGATGGGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTc < 2:1064652/237‑1 (MQ=255)
tGGTCTGGCTGGTGGTGAGGGGGTGAAAGGGGGTTTAGTACGATTGCAGGCGGTGGTGGAATAAGGTGTTTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCG‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGACGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTc < 1:1378313/239‑1 (MQ=255)
gttgtggtggtgATGAGGGGGTGGAAGAGGCTTTTTTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCCTAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGTCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGa < 2:1282486/228‑1 (MQ=255)
gTCTGGCTGGGGATGAGGTGGTTGAAGGGGCGTTATTTCGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGa < 2:370573/239‑1 (MQ=255)
tcgagCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGa < 1:155240/234‑1 (MQ=255)
tCTGGGCGCGGATGAGGTGGTTGAAGAGGCGTTATTTCGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGa < 1:1294902/238‑1 (MQ=255)
tCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGa < 1:501215/238‑1 (MQ=255)
tCTGGCTGCGGATGAGGTGGTGGAAAAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGa < 1:673509/238‑1 (MQ=255)
tCTGGCTGCGGATGAGGGGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTTTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGa < 1:39933/238‑1 (MQ=255)
gCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAAGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGGTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTTCCAACCTTCAACTTTTC‑CCACCTTTCCttttttcaagtct > 1:944949/1‑231 (MQ=255)
ggATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGTGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGt < 1:231103/238‑1 (MQ=255)
gATGAGGTGGTGGAAGAGGCGTTATTACGGTTGCAGGCGGTGGTGGAATAAGGTGTGTTGATTTATCGCGGGCATAAAAAAGCCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTa < 1:1234580/238‑1 (MQ=255)
aGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAAGGGGGTTTATTTTTCGCGGGCATAAAAAAACCCT‑TACTAAACGAA‑GCCC‑GGCGTTCAGGGGTATTACGCCCGAAGAACTTATTTATTCTTTGCGCGCTCGCAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCCACCTTCAACTTTTACCCCCCTTCCCTTTTTTCGGGTCTTTGAAGtc > 1:1056028/1‑237 (MQ=255)
ggtggtGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa > 1:1166532/1‑124 (MQ=255)
ggtggtGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 2:1166532/124‑1 (MQ=255)
gtggtgGGAGAGGCGGTATTAAGCTTGGAGGGGGTTGTGAAATAAGGTGTTGTTAGTTGTCGCGTGAAAAAAAAAACCCT‑TACTCACCTAA‑ACCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCC‑CTCACTTGCCTTTTTCGAGGTTTTTGTAGTGCTCg < 2:962381/239‑1 (MQ=255)
tggtggAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCg < 1:533939/238‑1 (MQ=255)
ggCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGa < 1:539042/211‑1 (MQ=255)
tattaCCCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCT‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGAttt < 1:1131689/239‑1 (MQ=255)
gCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTcag < 1:46146/239‑1 (MQ=255)
tgtggttGTATTAGGGGTTTTTATTTATTGGCGGCAATAAAAACCCCTGTGCT‑ACCGAA‑CCCC‑GGGTGTTATGGTTAAGTCGACAAAAGAACTTATTTATGCTTTGCGCGCTCGAAGGGGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTCGCAGCAGtt < 2:77791/237‑1 (MQ=255)
tgtggtgGAATAAGGGGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGtt < 2:1056028/237‑1 (MQ=255)
ggtggtGGAATAAGGTTTTTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGtt < 2:848864/238‑1 (MQ=255)
tggAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAATCCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGc < 1:1081126/238‑1 (MQ=255)
aaTAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa < 2:228299/83‑1 (MQ=255)
aaTAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAgaagaa > 1:228299/1‑83 (MQ=255)
aGGTGTGTTTTTTTATCGGGGGAATAAAAAAACCCT‑TTCTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGtt < 2:376716/239‑1 (MQ=255)
aGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTCCAACTTTCA‑CCCACTTGCCTTTTTCGAGGGCTTTTTAGTGCTTGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGtt > 1:986725/1‑239 (MQ=255)
aGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCC‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTCGGGCTCGCAGAAGTCGACGATTTGCGCTTTCAGCCGTTCAGGCAGATCGtt > 1:610162/1‑239 (MQ=255)
gtgtgtTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCg < 1:161460/136‑1 (MQ=255)
gtgtgtTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCg > 2:161460/1‑136 (MQ=255)
gtgtgtTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCAAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTa > 1:341794/1‑238 (MQ=255)
tgtttTTATTTATCGGTGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCTCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTaa < 1:537449/238‑1 (MQ=255)
tgtgtTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTaa < 1:80519/238‑1 (MQ=255)
tgtgtTTATTTATCCGGGGCCTAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCTTTCAGGGTTATTACGCCAGAAGAACTTATTTATGCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTaa < 2:944949/238‑1 (MQ=255)
tgtgtTTAGTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGGCAGAAGCACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTaa < 1:549533/238‑1 (MQ=255)
|
TTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTT‑ACATTGCGAAGAAGGCGATGTGC‑ACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAAGGTGTGTTTATTTATCGCGGGCATAAAAAAACCCT‑TACTAACCGAA‑GCCC‑GGCGTTCAGGGTTATTACGCCAGAAGAACTTATTTATTCTTTGCGCGCTCGAAGGAGGCAACGATTTCAGCTTTAGCGGC‑TTCTGCG‑TTTTCCCAACCTTCAACTTTCA‑CCCACTTGCCTTTTTCGAGGTCTTTGTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAA > NC_000913/4448810‑4449282
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
