Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F80 I1 R1 119 143.3 3427330 99.1% 3396484 212.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,769,121 (G)5→6 coding (457/822 nt) yfjQ → CP4‑57 prophage; protein YfjQ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,769,1161.G100.0% 439.8 / NA 116E151G (GAG→GGG) yfjQCP4‑57 prophage; protein YfjQ
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (64/52);  total (64/52)

Only 100 of 126 total aligned reads displayed.

GTACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑GGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGA  >  NC_000913/2768878‑2769341
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                 
gTACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑g                                                                                                                                                                                                                                  >  2:232172/1‑240 (MQ=255)
 tACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑gg                                                                                                                                                                                                                                 <  2:732492/240‑1 (MQ=255)
   cGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑gggg                                                                                                                                                                                                                               <  1:583169/240‑1 (MQ=255)
          cccGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTAt                                                                                                                                                                                                                         >  1:954968/1‑240 (MQ=255)
          cccGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑ggggggcgta                                                                                                                                                                                                                         >  1:1306162/1‑234 (MQ=255)
            cgtcgtcgtGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATg                                                                                                                                                                                                                        >  2:1692117/1‑239 (MQ=255)
                    tGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑gggg                                                                                                                                                                                                                               <  2:1660801/223‑1 (MQ=255)
                        cATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGAt                                                                                                                                                                                                           >  1:451713/1‑240 (MQ=255)
                           aCTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGAtttt                                                                                                                                                                                                        >  1:570087/1‑240 (MQ=255)
                             tAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGAttttt                                                                                                                                                                                                       <  1:195846/239‑1 (MQ=255)
                                  atatGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCg                                                                                                                                                                                                  >  1:901885/1‑239 (MQ=255)
                                     tgctgcGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGtgtg                                                                                                                                                                                              >  1:15534/1‑240 (MQ=255)
                                        tgcGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTgg                                                                                                                                                                                             <  2:277142/238‑1 (MQ=255)
                                        tgcGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑gg                                                                                                                                                                                                                                 <  2:58822/201‑1 (MQ=255)
                                         gcgcCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGAtgtt                                                                                                                                                                                                        >  2:225348/1‑226 (MQ=255)
                                         gcgcCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGgaa                                                                                                                                                                                           >  2:117953/1‑239 (MQ=255)
                                          cgcCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGgaag                                                                                                                                                                                          >  2:1473590/1‑239 (MQ=255)
                                          cgcCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑ggggggcg                                                                                                                                                                                                                           >  2:1105426/1‑202 (MQ=255)
                                           gcCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGgaagaa                                                                                                                                                                                        >  1:6973/1‑240 (MQ=255)
                                               aCGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑gg                                                                                                                                                                                                                                 <  2:426893/194‑1 (MQ=255)
                                                cGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAagag                                                                                                                                                                                   >  2:975180/1‑240 (MQ=255)
                                                cGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAagag                                                                                                                                                                                   >  1:1228894/1‑240 (MQ=255)
                                                 gTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAagag                                                                                                                                                                                   <  1:1382787/239‑1 (MQ=255)
                                                  tCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGgaagaa                                                                                                                                                                                        >  2:208165/1‑233 (MQ=255)
                                                   cGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGAGCGTGTGCCACACAAGGGGGATCTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAcgg                                                                                                                                                                                 <  1:485129/239‑1 (MQ=255)
                                                     ggAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCg                                                                                                                                                                                                  >  2:334298/1‑220 (MQ=255)
                                                     ggAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAagag                                                                                                                                                                                   <  2:256723/235‑1 (MQ=255)
                                                          ggCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATg                                                                                                                                                                         <  1:810779/240‑1 (MQ=255)
                                                          ggCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATg                                                                                                                                                                         <  1:80829/240‑1 (MQ=255)
                                                               aTTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGt                                                                                                                                                                     >  2:1159976/1‑239 (MQ=255)
                                                                       tAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGa                                                                                                                                                                                <  1:334298/220‑1 (MQ=255)
                                                                            aGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTAcc                                                                                                                                                        <  1:608479/239‑1 (MQ=255)
                                                                             ggTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCg                                                                                                                                                       <  1:778913/239‑1 (MQ=255)
                                                                             ggTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGc                                                                                                                                                      <  1:495330/240‑1 (MQ=255)
                                                                              gTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGcc                                                                                                                                                     >  1:865667/1‑240 (MQ=255)
                                                                                 ccGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCAc                                                                                                                                                   <  1:1473593/239‑1 (MQ=255)
                                                                                 ccGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCAc                                                                                                                                                   <  2:1306160/239‑1 (MQ=255)
                                                                                             cTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGc                                                                                                                                      <  1:131461/240‑1 (MQ=255)
                                                                                                         cACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAag                                                                                                                           <  1:117953/239‑1 (MQ=255)
                                                                                                          aCGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAagc                                                                                                                          >  1:1534886/1‑239 (MQ=255)
                                                                                                              tGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAagag                                                                                                                                                                                   <  1:1704960/178‑1 (MQ=255)
                                                                                                               ggCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAag                                                                                                                           >  1:663914/1‑233 (MQ=255)
                                                                                                               ggCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAag                                                                                                                           <  2:663913/233‑1 (MQ=255)
                                                                                                               ggCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCt                                                                                                                    >  1:1021170/1‑240 (MQ=255)
                                                                                                                      gTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTa                                                                                                              <  1:79589/239‑1 (MQ=255)
                                                                                                                      gTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTa                                                                                                              <  2:570086/239‑1 (MQ=255)
                                                                                                                      gTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTAt                                                                                                             >  1:393729/1‑240 (MQ=255)
                                                                                                                          gTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCt                                                                                                         <  2:595671/240‑1 (MQ=255)
                                                                                                                           tACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAgcg                                                                                                                      >  2:791412/1‑226 (MQ=255)
                                                                                                                           tACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCtt                                                                                                        >  2:1316383/1‑240 (MQ=255)
                                                                                                                               aGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTgg                                                                                                     <  2:1228892/239‑1 (MQ=255)
                                                                                                                                     tgcCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGac                                                                                              >  1:1611064/1‑240 (MQ=255)
                                                                                                                                      gcCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAag                                                                                                                           <  2:1329061/210‑1 (MQ=255)
                                                                                                                                                          tgtgCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGTTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATg                                                                                                                                                                         >  2:83457/1‑144 (MQ=255)
                                                                                                                                                          tgtgCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCa                                                                                                                                     >  1:1097682/1‑180 (MQ=255)
                                                                                                                                                          tgtgCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCtt                                                                                                        >  2:1073038/1‑209 (MQ=255)
                                                                                                                                                          tgtgCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATc                                                                          >  1:539592/1‑239 (MQ=255)
                                                                                                                                                          tgtgCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCg                                                                         >  2:1099027/1‑240 (MQ=255)
                                                                                                                                                             gCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGNTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCa                                                                       <  2:599591/239‑1 (MQ=255)
                                                                                                                                                              ccAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGa                                                                     <  1:495127/240‑1 (MQ=255)
                                                                                                                                                               cAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAg                                                                                                 >  1:627803/1‑211 (MQ=255)
                                                                                                                                                                      gtctggtctgCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAag                                                                                                                           <  2:978633/178‑1 (MQ=255)
                                                                                                                                                                      gtctggtctgCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAgcg                                                                                                                      >  1:1428235/1‑183 (MQ=255)
                                                                                                                                                                      gtctggtctgCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTcc                                                             >  2:1469624/1‑240 (MQ=255)
                                                                                                                                                                      gtctggtctgCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTcc                                                             >  2:1056305/1‑240 (MQ=255)
                                                                                                                                                                      gtctggtctgCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTcc                                                             >  1:986462/1‑240 (MQ=255)
                                                                                                                                                                       tctggtctgCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTa                                                                                                              <  2:441425/190‑1 (MQ=255)
                                                                                                                                                                       tctggtctgCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTa                                                                                                              >  1:441425/1‑190 (MQ=255)
                                                                                                                                                                                cggcgAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCa                                                                                                                                     >  2:1304109/1‑158 (MQ=255)
                                                                                                                                                                                cggcgAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCa                                                                                                                                     <  1:1304111/158‑1 (MQ=255)
                                                                                                                                                                                cggcgAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCAcgccgc                                                    >  2:8069/1‑239 (MQ=255)
                                                                                                                                                                                cggcgAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑gggg                                                                                                                                                                                                                               >  1:98182/1‑67 (MQ=255)
                                                                                                                                                                                     aGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCAc                                                         >  1:1114456/1‑229 (MQ=255)
                                                                                                                                                                                      gTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTg                                                                              >  1:1421513/1‑207 (MQ=255)
                                                                                                                                                                                      gTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGCCAGGATATCGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCg                                                                                                                                                                                                  >  2:328483/1‑91 (MQ=17)
                                                                                                                                                                                          tttGGCGAGGGGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGTGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATga                                         <  1:1543146/240‑1 (MQ=255)
                                                                                                                                                                                                  ggTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGTAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAAt                                  <  1:1099028/239‑1 (MQ=255)
                                                                                                                                                                                                   gTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCACTGGCAGGATGAGAGCAATGa                                >  2:1411882/1‑240 (MQ=255)
                                                                                                                                                                                                    tGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCAcg                                                        >  2:356605/1‑215 (MQ=255)
                                                                                                                                                                                                     gccggTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGAc                               <  1:1242383/236‑1 (MQ=255)
                                                                                                                                                                                                         gggCCACACAAGGGGGAGGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGTGATGCCATGCAGTCGTTGTTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTAt                                                                                                             <  2:578820/155‑1 (MQ=255)
                                                                                                                                                                                                            ccACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGac                       <  1:298642/240‑1 (MQ=255)
                                                                                                                                                                                                            ccACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGac                       >  1:1345458/1‑240 (MQ=255)
                                                                                                                                                                                                             cacacaAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGacc                      >  1:4606/1‑240 (MQ=255)
                                                                                                                                                                                                              acacaAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGacc                      >  1:503841/1‑239 (MQ=255)
                                                                                                                                                                                                              acacaAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGa                        <  1:1207419/237‑1 (MQ=255)
                                                                                                                                                                                                                    gggggATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTAt                                                                                                             <  2:1178626/146‑1 (MQ=255)
                                                                                                                                                                                                                    gggggATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATc               >  2:976543/1‑240 (MQ=255)
                                                                                                                                                                                                                    gggggATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATc               >  2:755623/1‑240 (MQ=255)
                                                                                                                                                                                                                     ggggATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCa              <  2:539591/240‑1 (MQ=255)
                                                                                                                                                                                                                       ggATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAAAAAAGAggg                                                                                                                                                                                 >  1:894870/1‑75 (MQ=255)
                                                                                                                                                                                                                       ggATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAAAAAAGAggg                                                                                                                                                                                 <  2:894869/75‑1 (MQ=255)
                                                                                                                                                                                                                        gATGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAAt                                  <  2:385365/217‑1 (MQ=255)
                                                                                                                                                                                                                         aTGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGAt                                           >  1:900658/1‑207 (MQ=255)
                                                                                                                                                                                                                         aTGTGGTGAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGAt                                           <  2:900657/207‑1 (MQ=255)
                                                                                                                                                                                                                            tggtgAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGAtt       >  2:569891/1‑240 (MQ=255)
                                                                                                                                                                                                                                gAGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCaa    >  2:850728/1‑239 (MQ=255)
                                                                                                                                                                                                                                 aGTCAGGTTATTGAGGGGGGCGTATGAGGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAgg                                                                                                                                       >  2:1578480/1‑107 (MQ=255)
                                                                                                                                                                                                                                 aGTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGa                        <  2:311075/218‑1 (MQ=255)
                                                                                                                                                                                                                                  gTCAGGTTATTGAGGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGa  <  2:4606/239‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                 
GTACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGA‑GGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGA  >  NC_000913/2768878‑2769341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A