Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F80 I1 R1
|
130 |
60.2 |
1467357 |
98.1% |
1439477 |
216.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,902,990 |
G→A |
P238S (CCA→TCA) |
bglB ← |
6‑phospho‑beta‑glucosidase B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,902,990 | 0 | G | A | 100.0%
| 185.7
/ NA
| 50 | P238S (CCA→TCA) | bglB | 6‑phospho‑beta‑glucosidase B |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (20/30); total (20/30) |
CGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGGCTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAG > NC_000913/3902757‑3903225
|
cgcATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGtgactggc > 1:316602/1‑239 (MQ=255)
ttttATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGa < 1:584339/240‑1 (MQ=255)
ttttATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGa < 2:581107/240‑1 (MQ=255)
ttaATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAggggg < 1:518004/240‑1 (MQ=255)
gggAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCg > 2:513941/1‑239 (MQ=255)
gTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGAtttt > 2:381698/1‑240 (MQ=255)
aCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCt > 2:21700/1‑238 (MQ=255)
aCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTc > 1:61695/1‑240 (MQ=255)
aaaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACTTATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCgggg > 1:667107/1‑240 (MQ=255)
agagATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAACCCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAg < 2:592566/240‑1 (MQ=255)
agagATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAg < 1:381703/240‑1 (MQ=255)
aTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCAACCGAGAAGCATATTGCCGAtt > 2:117219/1‑222 (MQ=255)
tCGACGGTATGTTTTAAATCTTCTACGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGa < 1:215492/240‑1 (MQ=255)
cGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGa < 1:647835/239‑1 (MQ=255)
tGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATTCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGa > 2:105478/1‑220 (MQ=255)
ttctGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCcgcg < 2:7827/239‑1 (MQ=255)
tctGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCgcgc > 1:701875/1‑239 (MQ=255)
gTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCCGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAg < 2:591112/204‑1 (MQ=255)
gTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGc < 1:105845/240‑1 (MQ=255)
tCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGa < 1:168255/239‑1 (MQ=255)
tCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGAt < 2:396136/240‑1 (MQ=255)
caactcAATGGTGATATGGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAACCCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGAt < 2:586190/236‑1 (MQ=255)
tctcAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGt < 1:89657/233‑1 (MQ=255)
ctcAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGt < 2:109358/232‑1 (MQ=255)
ctcAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGt > 1:109359/1‑232 (MQ=255)
ctcAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGAtggt > 1:176534/1‑239 (MQ=255)
atatTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCcgc > 2:635684/1‑207 (MQ=255)
atatTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTg > 2:653547/1‑239 (MQ=255)
ttGTGGTCGCGGAAGAAACGCTGCTTATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGTTGAGGGGGTAACCCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGt < 2:633764/219‑1 (MQ=255)
ttGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATaa > 2:72977/1‑240 (MQ=255)
aaaCGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCa < 1:95705/240‑1 (MQ=255)
aaaCGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCa < 1:2809/240‑1 (MQ=255)
aaaCGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCa < 2:448439/240‑1 (MQ=255)
ataGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAACCCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGa < 2:430082/160‑1 (MQ=255)
ggATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACa > 2:452076/1‑155 (MQ=255)
cgcgCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTTTGACTGGCTGGTGATGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGa < 2:406209/141‑1 (MQ=255)
ccTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGgc < 1:725306/239‑1 (MQ=255)
ccTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGgc < 1:270909/239‑1 (MQ=255)
cACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCAc > 2:722218/1‑198 (MQ=255)
ccAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCtcttc > 1:595532/1‑203 (MQ=255)
tCCATGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCa < 1:128501/239‑1 (MQ=255)
tGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGcc < 2:49127/143‑1 (MQ=255)
tGGCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGcc > 1:49127/1‑143 (MQ=255)
ggCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACg < 1:222182/239‑1 (MQ=255)
ggCCTGCAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACg < 1:518221/239‑1 (MQ=255)
cAACATATCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAg > 2:692254/1‑225 (MQ=255)
atCCTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGtt > 1:694585/1‑239 (MQ=255)
ccTGTGACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGt > 1:446195/1‑240 (MQ=255)
tgtgACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAg < 1:513950/240‑1 (MQ=255)
tgtgACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAg < 1:697928/240‑1 (MQ=255)
gtgtCTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAg < 1:318717/239‑1 (MQ=255)
gtgACTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAg < 1:660956/239‑1 (MQ=255)
|
CGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAACATATCCTGTGGCTGGCAGGTGAGGGGGTAAACCAGCCCACCGAGAAGCATATTGCCGATTTTCGCTTCGGGGAGCAGGCTATGACAGGCTTTAACTGCCCGCGCACTGGCAACCAGTTGATGGTGGATAGCCTGATAAACTTCCGCCTCGCCACTCTCTTCTGCCAGCCCCACGCCCGTGAATGGCGCGTGTAACGACATGTTGATTTCATTAAACGTCAGCCATAACGCCACTTTATGTTGGTAG > NC_000913/3902757‑3903225
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
