Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A22 F60 I1 R1
|
15 |
98.9 |
3343270 |
99.3% |
3319867 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,069,690 |
T→C |
T238A (ACC→GCC) |
yihR ← |
putative aldose 1‑epimerase YihR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,069,690 | 0 | T | C | 98.8%
| 302.2
/ ‑6.1
| 84 | T238A (ACC→GCC) | yihR | putative aldose 1‑epimerase YihR |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (42/41); total (43/41) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TAAAGGCGTTAGGCGGGCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGTCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGTGCTCATCGACGGCA > NC_000913/4069555‑4069826
|
tAAAGGCGTTAGGCGGGCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCAtt < 2:1171363/140‑1 (MQ=255)
aGGCGTTAGGCGGGCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTcc > 2:529357/1‑140 (MQ=255)
ggCGTTAGGCGGGCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTccc > 1:543630/1‑140 (MQ=255)
gCGTTAGGCGGGCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCca < 2:1631196/140‑1 (MQ=255)
gTTAGGCGGGCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCcaca > 1:1038643/1‑140 (MQ=255)
gTTAGGCGGGCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCcaca > 1:457548/1‑140 (MQ=255)
tAGGCGGGCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACaaa > 2:357003/1‑140 (MQ=255)
ggCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGTTCATTTCCCACAAATCAttt > 2:972481/1‑139 (MQ=255)
ggCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTa > 1:1370072/1‑140 (MQ=255)
ggCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTa > 1:561478/1‑140 (MQ=255)
cAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGc < 2:561478/140‑1 (MQ=255)
cAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGc < 2:1473383/140‑1 (MQ=255)
cAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGc < 2:1370072/140‑1 (MQ=255)
cAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGc < 1:840086/140‑1 (MQ=255)
cAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGc < 1:642704/140‑1 (MQ=255)
cAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGc < 1:133413/140‑1 (MQ=255)
aCTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCgg < 1:729428/140‑1 (MQ=255)
aCTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCgg < 1:32171/140‑1 (MQ=255)
aTAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGtttt < 1:357003/140‑1 (MQ=255)
cAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAg < 2:675762/126‑1 (MQ=255)
cAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAg > 1:675762/1‑126 (MQ=255)
cAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGgtg > 2:198433/1‑140 (MQ=255)
cAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGgtg > 2:1635161/1‑140 (MQ=255)
cAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGa > 1:540596/1‑140 (MQ=255)
cAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGa > 2:1638145/1‑140 (MQ=255)
cccTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCTTTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTTGAtttt > 2:1147749/1‑140 (MQ=255)
cccTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGt < 1:683036/133‑1 (MQ=255)
cccTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGt > 2:683036/1‑133 (MQ=255)
tGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCTTTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTTGATTTTTGt < 1:1147749/140‑1 (MQ=255)
tGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGt > 2:655002/1‑140 (MQ=255)
gACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTc < 1:1269564/140‑1 (MQ=255)
gACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTc < 1:136254/140‑1 (MQ=255)
cTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCgg < 1:198433/140‑1 (MQ=255)
cTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCgg < 2:32622/140‑1 (MQ=255)
tGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTc < 1:1487596/135‑1 (MQ=255)
tGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTc > 2:1487596/1‑135 (MQ=255)
tAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTa < 2:513249/140‑1 (MQ=255)
tAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTa > 2:1548634/1‑140 (MQ=255)
tAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTa > 2:309508/1‑140 (MQ=255)
tAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTa < 1:1638145/140‑1 (MQ=255)
tttCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTAttttt > 1:297926/1‑140 (MQ=255)
ttCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTAtttttt > 1:279294/1‑140 (MQ=255)
taAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGt < 2:1095756/140‑1 (MQ=255)
aaaCCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTg < 2:358765/140‑1 (MQ=255)
cACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTa > 1:93363/1‑140 (MQ=255)
cACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTa > 1:761559/1‑140 (MQ=255)
cACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTa > 2:1370434/1‑140 (MQ=255)
cACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTa > 2:245838/1‑140 (MQ=255)
cccAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTaaa < 1:48228/140‑1 (MQ=255)
cccAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTaaa < 1:1231225/140‑1 (MQ=255)
cccAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTaaa < 2:593971/140‑1 (MQ=255)
cAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATc < 1:1370434/140‑1 (MQ=255)
cAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTCTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATc < 2:1038643/140‑1 (MQ=255)
gagTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCa < 2:543630/140‑1 (MQ=255)
gATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAg > 1:410623/1‑136 (MQ=255)
gATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAg < 2:410623/136‑1 (MQ=255)
gATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCtca > 1:698155/1‑140 (MQ=255)
gATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCtca > 1:1452878/1‑140 (MQ=255)
aTCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCtcat < 2:63027/140‑1 (MQ=255)
tCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCtcatc > 2:497225/1‑140 (MQ=255)
gAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAAc < 2:540596/140‑1 (MQ=255)
gAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAAc < 2:457548/140‑1 (MQ=255)
gAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAAc < 2:65623/140‑1 (MQ=255)
aaCAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACg > 1:934604/1‑140 (MQ=255)
aaCAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACg > 2:934009/1‑140 (MQ=255)
aaCAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACg > 1:613241/1‑140 (MQ=255)
aaCAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACg < 1:1026637/140‑1 (MQ=255)
aaCAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACg > 1:896079/1‑140 (MQ=255)
aaCAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACg > 1:10087/1‑140 (MQ=255)
aGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACgtggtg > 1:94583/1‑140 (MQ=255)
gCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGaa < 2:1060236/140‑1 (MQ=255)
gCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGaa < 1:655002/140‑1 (MQ=255)
gCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGaa > 1:1079134/1‑140 (MQ=255)
tACCGAAAGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTAGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCg > 1:1267461/1‑140 (MQ=255)
aGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCgg > 2:776337/1‑140 (MQ=255)
aGCGCCTGCTGTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCgg > 2:1170478/1‑140 (MQ=255)
ctgTGGATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGt < 1:311917/140‑1 (MQ=255)
gATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGTGCTCa > 1:969096/1‑140 (MQ=255)
gATGGGTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGTGCTCa > 1:367314/1‑140 (MQ=255)
gggtaTGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGTGCTCATCGa < 2:359729/136‑1 (MQ=255)
ggTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGTGCTCATCGa < 1:309508/140‑1 (MQ=255)
gTAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGTGCTCATCGAc > 1:533873/1‑140 (MQ=255)
tAATGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGTGCTCATCGACg > 1:920114/1‑140 (MQ=255)
tGGCCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGTGCTCATCGACGGCa < 2:896079/140‑1 (MQ=255)
|
TAAAGGCGTTAGGCGGGCAACTCATAGGTTCAACTGCCAGTCCCTGACGCTGTAATTTTTCACCGCTATAAACCTGCACCCAGAGTTGATCGGAACAAAGGCTTACCGAAAGCGCCTGCTGTGGATGGGTAATGGTCATTTCCCACAAATCATTAGCGGTTTTAAAGGTGTGGTCGATTTTTGTCGCGGCTATTTTTTTCGCCTGCGTGAAATTTAAATCCAGCTCATCAACGTGGTGAAGCGTTGTCGGATTCGCGTGCTCATCGACGGCA > NC_000913/4069555‑4069826
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
