Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A38 F60 I1 R1 17 120.6 4079220 98.9% 4034348 139.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,438,138 IS1 (–) +8 bp coding (432‑439/939 nt) ytfI → protein YtfI

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1978503 =NA (NA)135 (1.120) 70/278 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4438145 0 (0.000)coding (439/939 nt) ytfI protein YtfI
* ? NC_000913 3583428 =NA (NA)154 (1.280) 84/278 0.1 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4438138 = 0 (0.000)coding (432/939 nt) ytfI protein YtfI

Only 100 of 135 total aligned reads displayed.

CATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1978640‑1978503
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACTACCTCGCAA  <  NC_000913/4438145‑4438007
                                                                                                                                                                                                                                                                                     
CATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGGCGGAAGTCGCTGTCGTTCTCAAAATCGATGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGT                                                                                                                                           <  2:248040/140‑1
CATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGT                                                                                                                                           <  2:945016/140‑1
       TGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCT                                                                                                                                    <  1:208845/140‑1
       TGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCT                                                                                                                                    <  2:331527/140‑1
        GAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTG                                                                                                                                   <  2:779179/140‑1
        GAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTG                                                                                                                                   <  1:983898/140‑1
          ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTA                                                                                                                                 >  2:733935/1‑140
          ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTA                                                                                                                                 >  2:582547/1‑140
          ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTA                                                                                                                                 >  2:350331/1‑140
          ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTA                                                                                                                                 >  1:1527675/1‑140
          ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTA                                                                                                                                 <  1:1141569/140‑1
          ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATAGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTA                                                                                                                                 >  2:1425725/1‑140
            CTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGA                                                                                                                               >  2:944709/1‑140
            CTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGA                                                                                                                               <  2:627436/140‑1
               AGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATA                                                                                                                            >  2:335334/1‑140
                GGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATAT                                                                                                                           <  2:1908549/140‑1
                GGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATAT                                                                                                                           >  1:650817/1‑140
                GGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATAT                                                                                                                           <  1:619053/140‑1
                  CAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCC                                                                                                                         <  2:1717310/140‑1
                  CAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCC                                                                                                                         <  1:575746/140‑1
                   AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCC                                                                                                                        <  2:829583/140‑1
                   AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCC                                                                                                                        <  2:359794/140‑1
                   AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCC                                                                                                                        <  2:1207890/140‑1
                     CACCTGGCACGGCTGGGACGGGAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAG                                                                                                                      <  2:741691/140‑1
                     CACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAG                                                                                                                      <  2:222676/140‑1
                     CACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAG                                                                                                                      <  2:1002572/140‑1
                     CACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAG                                                                                                                      <  1:291941/140‑1
                     CACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAG                                                                                                                      <  2:4131/140‑1
                       CCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGC                                                                                                                    <  1:1522711/140‑1
                       CCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGC                                                                                                                    <  1:1473292/140‑1
                         TGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCAT                                                                                                                  >  2:766537/1‑140
                          GGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATA                                                                                                                 <  1:1844718/140‑1
                               GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATC                                                                                                            <  2:727353/140‑1
                                    GGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTG                                                                                                       >  1:1138261/1‑140
                                     GACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGT                                                                                                      <  2:1527675/140‑1
                                                 TGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACG                                                                                          >  2:1173812/1‑140
                                                        CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTC                                                                                   <  2:1650553/140‑1
                                                          CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCAC                                                                                 <  2:1058758/140‑1
                                                             AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGT                                                                              >  2:1752904/1‑140
                                                                      AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAAT                                                                     <  2:151107/140‑1
                                                                      AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGGCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAAT                                                                     <  2:1790727/140‑1
                                                                         TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCA                                                                  <  1:1116964/140‑1
                                                                            ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGA                                                               <  1:1425725/140‑1
                                                                             TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAA                                                              >  2:197200/1‑140
                                                                              GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAAT                                                             <  1:834758/140‑1
                                                                              GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAAT                                                             <  1:478229/140‑1
                                                                              GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAAT                                                             <  2:1216158/140‑1
                                                                              GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAAT                                                             <  2:1287645/140‑1
                                                                                   AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTT                                                        <  1:350331/140‑1
                                                                                     TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTAT                                                      >  2:548852/1‑140
                                                                                     TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTAT                                                      >  1:1167737/1‑140
                                                                                     TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGG‑TTTTGAAATCCATGAATGAGTTATA                                                     <  2:921169/140‑1
                                                                                      CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATA                                                     >  1:10976/1‑140
                                                                                      CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATA                                                     <  1:904689/140‑1
                                                                                      CATCGGGCATTATCCGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATA                                                     <  2:1774054/140‑1
                                                                                        TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATT                                                   >  1:1416166/1‑140
                                                                                        TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATT                                                   >  2:1890757/1‑140
                                                                                         CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTC                                                  >  1:1368480/1‑140
                                                                                           GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCAT                                                <  1:1063661/140‑1
                                                                                             CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTT                                              >  2:1151296/1‑140
                                                                                              ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTA                                             <  2:1416166/140‑1
                                                                                               TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTAT                                            >  2:181316/1‑140
                                                                                               TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTAT                                            >  2:873951/1‑140
                                                                                               TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTA                                             <  2:1401545/139‑1
                                                                                               TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTA                                             >  1:1401545/1‑139
                                                                                               TTATCTGAACATAAAACACTATCAATAAGTTGGAGCCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTAT                                            >  1:25000/1‑140
                                                                                                   CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTT                                        <  1:1749076/140‑1
                                                                                                   CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTT                                        <  2:650817/140‑1
                                                                                                   CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTT                                        <  2:630836/140‑1
                                                                                                      AACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATG                                     >  1:2039337/1‑140
                                                                                                      AACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATG                                     >  2:1714482/1‑140
                                                                                                      AACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATG                                     <  1:1676219/140‑1
                                                                                                      AACATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATG                                     >  1:1531223/1‑140
                                                                                                        CATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTTGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGG                                   >  2:1309393/1‑140
                                                                                                        CATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGG                                   <  2:1891963/140‑1
                                                                                                        CATAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGG                                   <  2:1236115/140‑1
                                                                                                          TAAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGaa                                 >  1:852215/1‑138
                                                                                                           AAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTAT                                >  1:45905/1‑140
                                                                                                           AAAACACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTAT                                >  2:1635569/1‑140
                                                                                                                ACTATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTT                           >  1:864847/1‑140
                                                                                                                  TATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCG                         <  1:833737/140‑1
                                                                                                                  TATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTG‑TTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGT                        >  2:503192/1‑140
                                                                                                                   ATCAATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGT                        >  1:693585/1‑140
                                                                                                                       ATAAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTC                    <  1:529997/140‑1
                                                                                                                         AAGTTGGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGCATTTCTTCGTATTCAA                  <  1:118906/140‑1
                                                                                                                              GGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCA             >  2:765096/1‑140
                                                                                                                              GGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCA             >  1:1150772/1‑140
                                                                                                                              GGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCA             >  1:1196115/1‑140
                                                                                                                              GGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCA             >  2:1128970/1‑140
                                                                                                                              GGAGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCA             >  2:2184/1‑140
                                                                                                                                AGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACT           >  2:1580920/1‑140
                                                                                                                                AGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACT           >  2:1620640/1‑140
                                                                                                                                AGTCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACT           >  1:1987319/1‑140
                                                                                                                                  TCATTACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACTAC         <  1:548852/140‑1
                                                                                                                                      TACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACTACCTCG     <  1:1226056/140‑1
                                                                                                                                      TACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACTACCTCG     >  1:1801752/1‑140
                                                                                                                                      TACCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACTACCTCG     <  1:476620/140‑1
                                                                                                                                        CCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACTACCTCGCA   <  2:1154167/140‑1
                                                                                                                                        CCGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACTACCTCGCA   <  2:1955326/140‑1
                                                                                                                                         CGTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACTACCTCGCAA  <  1:1767116/140‑1
                                                                                                                                                                                                                                                                                     
CATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1978640‑1978503
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTTTCTGTAGAATATCCCAGGCATACAATCGTCTGTTTTGTTCTAACGGAAATTCACGGTTTTTGAAATCCATGAATGAGTTATATTCATTTATTGTTATGGGTATTTCTTCGTATTCAAATCCACTACCTCGCAA  <  NC_000913/4438145‑4438007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A