Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F60 I1 R1	19	67.9	2307380	99.1%	2286613	137.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,921,909	T→A	W44R (TGG→AGG)	yebV →	protein YebV

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,921,909	0	T	A	100.0%	251.0 / NA	71	W44R (TGG→AGG)	yebV	protein YebV
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (36/35); total (36/35)

AGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGG  >  NC_000913/1921771‑1922040

agCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACG‑TAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAgg                                                                                                                                   >  2:180968/1‑140 (MQ=255)

 gCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAgg                                                                                                                                   >  1:1116061/1‑140 (MQ=255)

         aTGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACAGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGACGCCAGGGATGCTGa                                                                                                                           <  2:547729/140‑1 (MQ=255)

            aaaaCCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAAc                                                                                                                        >  1:664901/1‑140 (MQ=255)

              aaCCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCa                                                                                                                      <  1:616350/140‑1 (MQ=255)

                   gtgtGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAg                                                                                                                     >  2:484003/1‑136 (MQ=255)

                   gtgtGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAg                                                                                                                     <  1:484003/136‑1 (MQ=255)

                   gtgtGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATc                                                                                                                 >  2:929557/1‑140 (MQ=255)

                   gtgtGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATc                                                                                                                 >  2:433122/1‑140 (MQ=255)

                    tgtgCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATcc                                                                                                                >  1:974254/1‑140 (MQ=255)

                      tgCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATccct                                                                                                              >  2:310920/1‑140 (MQ=255)

                       gcgcATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATccctg                                                                                                             <  2:544666/140‑1 (MQ=255)

                        cgcATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATccctgc                                                                                                            >  2:1073390/1‑140 (MQ=255)

                        cgcATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATccctgc                                                                                                            >  1:181765/1‑140 (MQ=255)

                         gcATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATccctgcc                                                                                                           <  2:1116061/140‑1 (MQ=255)

                           aTAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATccctgccct                                                                                                         >  2:604678/1‑140 (MQ=255)

                            tAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATccctgccctg                                                                                                        >  1:245983/1‑140 (MQ=255)

                              ggCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCt                                                                                                      >  2:328041/1‑140 (MQ=255)

                                cgcTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTaa                                                                                                    <  2:850804/140‑1 (MQ=255)

                                  cTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAAt                                                                                                  >  2:303491/1‑140 (MQ=255)

                                       gAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGa                                                                                             <  2:362421/140‑1 (MQ=255)

                                        aaaTCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGaa                                                                                            <  1:237628/140‑1 (MQ=255)

                                         aaTCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAac                                                                                           >  1:523223/1‑140 (MQ=255)

                                            cgacgaCGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                        <  2:296401/140‑1 (MQ=255)

                                            cgacgaCGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                        <  1:1036897/140‑1 (MQ=255)

                                            cgacgaCGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                        <  1:442844/140‑1 (MQ=255)

                                            cgacgaCGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                        <  2:676709/140‑1 (MQ=255)

                                             gacgacGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACActc                                                                                       <  1:725975/140‑1 (MQ=255)

                                              acgacgGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACActct                                                                                      <  1:929557/140‑1 (MQ=255)

                                                  cgGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTcc                                                                                  <  2:523223/140‑1 (MQ=255)

                                                     cGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCttt                                                                               >  2:1098812/1‑140 (MQ=255)

                                                           acacGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTa                                                                         <  2:143610/140‑1 (MQ=255)

                                                                   aaTCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCg                                                                     >  1:952403/1‑136 (MQ=255)

                                                                   aaTCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCg                                                                     <  2:952403/136‑1 (MQ=255)

                                                                    aTCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACg                                                                >  2:15719/1‑140 (MQ=255)

                                                                       gCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATc                                                             <  1:1073390/140‑1 (MQ=255)

                                                                         cAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATcaa                                                           >  1:380253/1‑140 (MQ=255)

                                                                           ggTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTa                                                                         <  1:928381/124‑1 (MQ=255)

                                                                           ggTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTa                                                                         >  2:928381/1‑124 (MQ=255)

                                                                               aTCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCt                                                     <  2:481193/140‑1 (MQ=255)

                                                                                 cGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCt                                                     >  1:709628/1‑138 (MQ=255)

                                                                                 cGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCt                                                     <  2:709628/138‑1 (MQ=255)

                                                                                   aaCGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTAc                                                                 <  1:292291/124‑1 (MQ=255)

                                                                                   aaCGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTAc                                                                 >  2:292291/1‑124 (MQ=255)

                                                                                     cGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGcc                                               >  2:1089371/1‑140 (MQ=255)

                                                                                       ttAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCt                                                     <  1:512289/132‑1 (MQ=255)

                                                                                       ttAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCt                                                     >  2:512289/1‑132 (MQ=255)

                                                                                        tAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTgg                                            <  2:913185/140‑1 (MQ=255)

                                                                                         aaCCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGa                                           >  2:510560/1‑140 (MQ=255)

                                                                                          aCCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTg                                             <  1:605010/137‑1 (MQ=255)

                                                                                          aCCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTg                                             >  2:605010/1‑137 (MQ=255)

                                                                                              ttCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTAt                                       <  2:450038/139‑1 (MQ=255)

                                                                                              ttCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTAt                                       >  1:450038/1‑139 (MQ=255)

                                                                                               tCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGc                                                >  1:497882/1‑129 (MQ=255)

                                                                                               tCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGc                                                <  2:497882/129‑1 (MQ=255)

                                                                                               tCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTa                                        <  2:397578/137‑1 (MQ=255)

                                                                                               tCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTa                                        >  1:397578/1‑137 (MQ=255)

                                                                                                    gTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCtt                                >  1:478564/1‑140 (MQ=255)

                                                                                                            gACCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATc                        >  2:1139968/1‑140 (MQ=255)

                                                                                                             aCCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATcc                       >  1:827303/1‑140 (MQ=255)

                                                                                                             aCCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATc                        >  2:871817/1‑139 (MQ=255)

                                                                                                             aCCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATc                        >  2:1132993/1‑139 (MQ=255)

                                                                                                             aCCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATc                        <  1:1132993/139‑1 (MQ=255)

                                                                                                             aCCCCGATTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATc                        <  1:871817/139‑1 (MQ=255)

                                                                                                                   aTTTATGTATGCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAg                 <  1:604678/140‑1 (MQ=255)

                                                                                                                            tgCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCg        <  1:245225/140‑1 (MQ=255)

                                                                                                                            tgCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCg        >  2:245225/1‑140 (MQ=255)

                                                                                                                             gCAACTGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCgg       >  2:875057/1‑140 (MQ=255)

                                                                                                                                  tGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATgg  <  2:478564/140‑1 (MQ=255)

                                                                                                                                  tGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATgg  <  2:181765/140‑1 (MQ=255)

                                                                                                                                  tGGATGCCAGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATgg  <  1:1089371/140‑1 (MQ=255)

AGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGG  >  NC_000913/1921771‑1922040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A