Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F60 I1 R1
|
18 |
111.2 |
3814234 |
99.3% |
3787534 |
138.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,690,671 |
G→C |
A143G (GCC→GGC) |
glrK ← |
sensory histidine kinase GlrK |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,690,671 | 0 | G | C | 100.0%
| 411.8
/ NA
| 105 | A143G (GCC→GGC) | glrK | sensory histidine kinase GlrK |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (64/41); total (64/41) |
Only 100 of 106 total aligned reads displayed.
TTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTGCGTGGGCATC > NC_000913/2690534‑2690804
|
ttACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCa < 2:1265276/140‑1 (MQ=255)
tACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCaa < 1:1752099/140‑1 (MQ=255)
aCCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCaaa < 1:744228/140‑1 (MQ=255)
aCCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCaaa < 1:701816/140‑1 (MQ=255)
ccAGACTCACCAGAAATAGCGCCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAg > 1:167874/1‑140 (MQ=255)
ccAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAg < 1:1183195/140‑1 (MQ=255)
aGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGc > 1:920986/1‑140 (MQ=255)
aCTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCtt > 1:909973/1‑140 (MQ=255)
aCTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCtt > 2:749866/1‑140 (MQ=255)
aCTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCtt > 1:1462767/1‑140 (MQ=255)
aCTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCtt > 1:144690/1‑140 (MQ=255)
cTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCaa < 2:1284709/133‑1 (MQ=255)
cTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCaa > 1:1284709/1‑133 (MQ=255)
cTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTc > 2:56908/1‑140 (MQ=255)
cTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTc > 2:1314940/1‑140 (MQ=255)
cTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTc > 1:929626/1‑140 (MQ=255)
tCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCa > 2:1560828/1‑140 (MQ=255)
cACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCaa > 2:254830/1‑140 (MQ=255)
cACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCaa < 2:1848958/140‑1 (MQ=255)
aCCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCaaa < 2:1141089/131‑1 (MQ=255)
aCCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCaaa > 1:1141089/1‑131 (MQ=255)
aCCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAg > 2:252824/1‑140 (MQ=255)
aCCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAg > 2:1614631/1‑140 (MQ=255)
aCCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAg > 2:1146055/1‑140 (MQ=255)
aCCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAg > 2:1191596/1‑140 (MQ=255)
aCCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAg > 1:1078709/1‑140 (MQ=255)
aCCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAg > 2:626421/1‑140 (MQ=255)
aaaTAGCGCCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTg < 2:167874/140‑1 (MQ=255)
gCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTgcggcg > 1:513665/1‑140 (MQ=255)
gCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTgcggcg > 1:1466384/1‑140 (MQ=255)
gCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTgcggcg > 1:731785/1‑140 (MQ=255)
gCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTgcggcg > 1:1558960/1‑140 (MQ=255)
gCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTgcggcg > 1:696807/1‑140 (MQ=255)
ccAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTgcggcggcg < 1:779807/140‑1 (MQ=255)
aGCGATTGCCAACCAAAATATCGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCggcggcggc < 1:1238051/140‑1 (MQ=255)
gCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTg > 2:1468085/1‑129 (MQ=255)
gCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTg < 1:1468085/129‑1 (MQ=255)
gCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGgca > 2:610112/1‑140 (MQ=255)
gCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGgca > 2:1597579/1‑140 (MQ=255)
caaccaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCgg > 1:846446/1‑139 (MQ=255)
caaccaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCgg < 2:846446/139‑1 (MQ=255)
aaccaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGa < 2:144690/140‑1 (MQ=255)
aaccaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGa < 1:1191596/140‑1 (MQ=255)
aaccaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGa < 2:909973/140‑1 (MQ=255)
aaccaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGAGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGa < 2:411210/140‑1 (MQ=255)
accaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGAc < 1:56908/140‑1 (MQ=255)
accaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCC‑‑CGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGAcc < 2:131207/139‑1 (MQ=255)
accaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCC‑‑CGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGAcc > 1:131207/1‑139 (MQ=255)
ccaaAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGAcc < 2:909997/140‑1 (MQ=255)
aaaaTATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGc < 2:1078709/140‑1 (MQ=255)
aaaaTATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGc < 2:1282471/140‑1 (MQ=255)
aaTATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCtg > 2:700707/1‑140 (MQ=255)
atTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCtgttg < 1:1597579/140‑1 (MQ=255)
cccACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTac > 2:1884286/1‑140 (MQ=255)
cccACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTac > 1:1203485/1‑140 (MQ=255)
aCGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACt < 2:1558960/140‑1 (MQ=255)
aCGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACt < 2:731785/140‑1 (MQ=255)
aCGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACt > 1:435484/1‑140 (MQ=255)
cagCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACTGCTGTTGTTACACTGAAg < 2:349050/137‑1 (MQ=255)
cagCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACTGCTGTTGTTACACTGAAg > 1:349050/3‑139 (MQ=255)
gATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAg < 1:1455683/140‑1 (MQ=255)
gATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAg < 2:1203485/140‑1 (MQ=255)
aTTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGc > 1:1166358/1‑140 (MQ=255)
aCGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATGGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCTGGACCGCTGTTGTTACACTGAAGTTGAGCCAGAt < 2:395339/140‑1 (MQ=255)
gAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGc < 2:513665/140‑1 (MQ=255)
aaGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCa > 1:962451/1‑140 (MQ=255)
ctgcCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCt > 1:1743040/1‑140 (MQ=255)
tgcCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGTAAATCCTg < 2:706570/140‑1 (MQ=255)
aaCACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTg < 1:1614631/140‑1 (MQ=255)
aaCACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTg < 1:626421/140‑1 (MQ=255)
acacCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCGGATTGTGCAAATCCTGACGTAATGCCTgg < 1:254830/140‑1 (MQ=255)
caccacTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGt < 1:1884286/140‑1 (MQ=255)
cacTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGcc > 1:1888749/1‑133 (MQ=255)
cacTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGcc < 2:1888749/133‑1 (MQ=255)
cacTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTaga > 2:43708/1‑140 (MQ=255)
cacTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTaga > 1:802910/1‑140 (MQ=255)
cTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGt < 2:1027457/135‑1 (MQ=255)
cTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGt > 1:1027457/1‑135 (MQ=255)
cTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGt > 2:509825/1‑140 (MQ=255)
tgtgCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGtt > 1:1047032/1‑140 (MQ=255)
tgCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTa > 1:1019836/1‑140 (MQ=255)
tgCGCGTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTa > 1:951457/1‑140 (MQ=255)
cgcgTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATc > 1:1196608/1‑140 (MQ=255)
gTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTc > 1:1246941/1‑140 (MQ=255)
gTGGCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGCTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTc > 1:70344/1‑140 (MQ=255)
gCCTGTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCgg > 2:1557007/1‑140 (MQ=255)
gTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGgcagc > 1:1627787/1‑140 (MQ=255)
gTACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGgcagc > 1:1045345/1‑140 (MQ=255)
tACCATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGgcagca > 2:1530289/1‑140 (MQ=255)
ccATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACg < 2:366513/140‑1 (MQ=255)
ccATTTCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACg < 2:70344/140‑1 (MQ=255)
ttCGGTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTg > 1:68437/1‑140 (MQ=255)
gTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTGCGTg > 1:332041/1‑140 (MQ=255)
gTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTGCGTg > 1:656970/1‑140 (MQ=255)
gTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTGCGTg > 1:1594159/1‑140 (MQ=255)
gTATTGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGATAGAGTTTATCGTCCGGCAGCACGCCTGCGTg > 2:1391253/1‑140 (MQ=255)
ttGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTGCGTGGGc > 2:761709/1‑140 (MQ=255)
tGGCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTGCGTGGGCa < 1:43708/140‑1 (MQ=255)
ggCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTGCGTGGGCAt > 1:1862916/1‑140 (MQ=255)
gCACTGCCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTGCGTGGGCATc > 2:825339/1‑140 (MQ=255)
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TTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTGCCCACGTTCGGCGATTTCACGCTGAAGCTGCTGCCCACGAGAGAACACCACTGTGCGCGTGGCCTGTACCATTTCGGTATTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTTGAGCCAGATTGTGCAAATCCTGACGTAATGCCTGGTAGAGTTTATCGTCCGGCAGCACGCCTGCGTGGGCATC > NC_000913/2690534‑2690804
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
