Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F60 I1 R1
|
15 |
55.1 |
2015454 |
99.1% |
1997314 |
138.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,922,651 |
G→A |
Q112* (CAG→TAG) |
yqcA ← |
putative flavodoxin YqcA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,922,651 | 0 | G | A | 100.0%
| 286.5
/ NA
| 82 | Q112* (CAG→TAG) | yqcA | putative flavodoxin YqcA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (43/39); total (43/39) |
TACCGCTCGCTGAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTGCAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAAGAGTGGCACAATGCT > NC_000913/2922517‑2922786
|
tACCGCTCGCTGAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTacaaca < 2:575200/140‑1 (MQ=255)
aCCGCTCGCTGAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTAcaacaa > 1:787184/1‑140 (MQ=255)
ctcgctGAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCa < 2:421804/140‑1 (MQ=255)
tcgctGAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCAt > 1:263354/1‑140 (MQ=255)
cgctGAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATc > 1:703183/1‑140 (MQ=255)
cgctGAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATc > 2:724294/1‑140 (MQ=255)
gAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAAc < 1:157589/140‑1 (MQ=255)
gAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAAc < 1:909083/140‑1 (MQ=255)
gAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAAc < 1:932815/140‑1 (MQ=255)
aCATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTg > 2:868796/1‑140 (MQ=255)
tatCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGttt < 1:673665/140‑1 (MQ=255)
tCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTgc > 2:729906/1‑140 (MQ=255)
tCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTgc < 2:203139/140‑1 (MQ=255)
ggACAACAGCGTGCCACACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTgccgc < 1:139229/140‑1 (MQ=255)
caacaGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTgccgc < 2:311203/137‑1 (MQ=255)
caacaGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTgccgc > 1:311203/1‑137 (MQ=255)
aacaGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAAc > 2:438218/1‑126 (MQ=255)
aacaGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAAc < 1:438218/126‑1 (MQ=255)
aacaGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCAtt > 2:647748/1‑140 (MQ=255)
acaGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTg > 1:406221/1‑140 (MQ=255)
caGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAAc < 2:914045/124‑1 (MQ=255)
caGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAAc > 1:914045/1‑124 (MQ=255)
caGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGc > 2:518098/1‑140 (MQ=255)
caGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGc > 2:91472/1‑140 (MQ=255)
gTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGaa > 1:173995/1‑140 (MQ=255)
tGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGaaa > 2:394096/1‑140 (MQ=255)
tGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGaaa > 2:940264/1‑140 (MQ=255)
tGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGaaa < 2:95104/140‑1 (MQ=255)
tGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGaaa > 1:626900/1‑140 (MQ=255)
ccccACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAAtt < 2:406221/140‑1 (MQ=255)
ccccACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAAtt < 2:617900/140‑1 (MQ=255)
ccACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTca < 1:518098/140‑1 (MQ=255)
ccACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGAATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTca < 1:320859/140‑1 (MQ=255)
cACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTcac > 1:401947/1‑140 (MQ=255)
cACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTcac < 2:787184/140‑1 (MQ=255)
aCTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTATAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTcaca > 2:736596/1‑140 (MQ=255)
aCTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCAGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTcaca > 1:598945/1‑140 (MQ=255)
ttCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAac < 2:173995/140‑1 (MQ=255)
gACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGaa > 1:175682/1‑126 (MQ=255)
gACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGaa < 2:175682/126‑1 (MQ=255)
cccACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTg > 2:908321/1‑140 (MQ=255)
aCGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCg > 1:608822/1‑140 (MQ=255)
tttGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAg < 1:394096/140‑1 (MQ=255)
tGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAgcg > 2:912665/1‑140 (MQ=255)
ttCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCACTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCaa > 2:882468/1‑140 (MQ=255)
tCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAAAAAGGCATCAAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAAt < 2:838860/140‑1 (MQ=255)
cGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCa < 1:724294/140‑1 (MQ=255)
gTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCAc > 1:837269/1‑140 (MQ=255)
gTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCAc > 1:641138/1‑140 (MQ=255)
ctcACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCg < 1:908321/140‑1 (MQ=255)
aCTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCt > 2:648828/1‑140 (MQ=255)
aCTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCt > 2:380350/1‑140 (MQ=255)
gCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGaa > 1:492899/1‑140 (MQ=255)
cGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAg > 1:41085/1‑140 (MQ=255)
cGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAg > 1:139777/1‑140 (MQ=255)
cGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAg > 1:270544/1‑140 (MQ=255)
tcaatcaaCAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTATAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGcc < 1:736596/140‑1 (MQ=255)
tcaatcaaCAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGcc < 1:209211/140‑1 (MQ=255)
caatcaaCAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGccc > 2:397548/1‑140 (MQ=255)
aatcaaCAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCa < 1:648828/140‑1 (MQ=255)
atcaaCAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAg < 1:35368/140‑1 (MQ=255)
atcaaCAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAg > 2:186311/1‑140 (MQ=255)
tcaaCAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGa < 2:270544/140‑1 (MQ=255)
tcaaCAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGa < 1:91472/140‑1 (MQ=255)
aCAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTa > 1:125862/1‑140 (MQ=255)
cATTTCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCtt > 2:407174/1‑140 (MQ=255)
ttCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGa > 1:69007/1‑140 (MQ=255)
ttCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGa < 2:69007/140‑1 (MQ=255)
ttCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGa < 2:41085/140‑1 (MQ=255)
ttCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGa > 1:248130/1‑140 (MQ=255)
ttCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGa > 1:444934/1‑140 (MQ=255)
tCGCCAACCCGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGAt < 2:837269/140‑1 (MQ=255)
cccGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGa > 2:548012/1‑140 (MQ=255)
cccGCTGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGa < 1:186311/140‑1 (MQ=255)
tGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGa < 1:35643/127‑1 (MQ=255)
tGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGa > 2:35643/1‑127 (MQ=255)
tGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAagag < 2:248130/140‑1 (MQ=255)
tGAGCGCTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAagag < 1:647748/140‑1 (MQ=255)
tGAGCACTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAagag < 1:882468/140‑1 (MQ=255)
gcgcTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATACCTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAAGAGTgg < 2:401947/140‑1 (MQ=255)
cgcTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAAGAGTGGc < 2:703183/140‑1 (MQ=255)
cgcTCTGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAAGAGTGGc < 1:868796/140‑1 (MQ=255)
tGTTCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAAGAGTGGCACAAt > 2:33799/1‑140 (MQ=255)
tCCTACAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAAGAGTGGCACAATGCt < 1:397548/140‑1 (MQ=255)
|
TACCGCTCGCTGAACATATCAGGACAACAGCGTGCCCCACTGTTCGACCCACGGATTTGATTCCGTTTCCGGTTCCGGGTTCTCACTGGCGTCAATCAACAGCATTTCGCCAACCCGCTGAGCGCTCTGTTCCTGCAACAAGGCATCGAACTGTTTGCCGCCATTGCAGAAATTCACATAACTACTGTCGCCGAGCGCAATCACGCCATAACGCAGATTCGGCTGGAAGCCCAGACTATCTTTGATTCCCTGAAAGAGTGGCACAATGCT > NC_000913/2922517‑2922786
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
