Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A37 F30 I1 R1
|
22 |
188.8 |
6353638 |
99.4% |
6315516 |
138.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,444,828 |
G→T |
K239N (AAG→AAT) |
tamB → |
translocation and assembly module subunit TamB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,444,828 | 0 | G | T | 98.0%
| 718.4
/ 2.7
| 204 | K239N (AAG→AAT) | tamB | translocation and assembly module subunit TamB |
| Reads supporting (aligned to +/- strand): ref base G (2/2); new base T (98/102); total (100/104) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 208 total aligned reads displayed.
GTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCG > NC_000913/4444691‑4444964
|
tCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATTTCTTTTCTCGCCCGGTATTACCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGc > 2:1876236/1‑140 (MQ=255)
tCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGc > 2:727196/1‑140 (MQ=255)
tCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGc > 1:241878/1‑140 (MQ=255)
tCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGc > 2:1392034/1‑140 (MQ=255)
tCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGc > 2:1505935/1‑140 (MQ=255)
aCCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGagc > 1:1905754/1‑140 (MQ=255)
gAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGagcagc > 2:1302692/1‑140 (MQ=255)
aaaaTCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTg < 1:1392034/140‑1 (MQ=255)
tCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACgg < 2:1549804/140‑1 (MQ=255)
ccGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACggg < 1:1462808/140‑1 (MQ=255)
ccGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACggg < 1:2039518/140‑1 (MQ=255)
cAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGa > 2:107081/1‑140 (MQ=255)
ggATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACgg > 2:1648616/1‑140 (MQ=255)
tGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACa < 1:1299917/140‑1 (MQ=255)
aGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCAcc > 1:1959638/1‑140 (MQ=255)
ccGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGt < 1:3098982/140‑1 (MQ=255)
ccGCTCGGCGAAACGCTGAAAGATCTCTCTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGt < 1:3111098/140‑1 (MQ=255)
cGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACa < 1:2221051/132‑1 (MQ=255)
gCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCg > 2:5945/1‑137 (MQ=255)
gCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGa > 2:1258949/1‑140 (MQ=255)
gCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGa > 1:2370575/1‑140 (MQ=255)
gCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGa > 2:3024427/1‑140 (MQ=255)
gCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGa > 1:1092480/1‑140 (MQ=255)
gCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCACTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGa > 2:2411452/1‑140 (MQ=255)
cTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCAcc > 2:1441421/1‑135 (MQ=255)
cTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCAcc < 1:1441421/135‑1 (MQ=255)
cTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAg > 1:538138/1‑140 (MQ=255)
cTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAg > 2:2690648/1‑140 (MQ=255)
cGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCa < 1:1920187/140‑1 (MQ=255)
ggCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCAc > 2:2452639/1‑140 (MQ=255)
aaCGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCAtgc < 1:690528/140‑1 (MQ=255)
gCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCAtgctgc < 1:1505935/140‑1 (MQ=255)
tGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATAACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGctgctg > 2:1446832/1‑140 (MQ=255)
tctcTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACAGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGa < 2:880841/140‑1 (MQ=255)
ctctTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGag < 1:2690648/140‑1 (MQ=255)
ctTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGagca > 2:396375/1‑140 (MQ=255)
ttCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGagca < 1:2106613/137‑1 (MQ=255)
ttCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGagca > 2:2106613/1‑137 (MQ=255)
gCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGAc > 1:2175061/1‑140 (MQ=255)
ccGGTATTGCCGGAAATGTCCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACgg < 1:2884996/140‑1 (MQ=255)
ccGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACgg < 1:3087843/140‑1 (MQ=255)
cGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGc > 2:258749/1‑140 (MQ=255)
cGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGc > 1:1128725/1‑140 (MQ=255)
cGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGc > 1:1787690/1‑140 (MQ=255)
ggTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCa < 2:217717/140‑1 (MQ=255)
gTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCaa > 2:356866/1‑140 (MQ=255)
ccGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTaa > 1:2475097/1‑140 (MQ=255)
cGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTaaa > 2:2744518/1‑140 (MQ=255)
gAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACt < 2:1905754/140‑1 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATTACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg < 1:1876236/140‑1 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg > 1:1666926/1‑140 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg < 2:1128725/140‑1 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg < 1:3174402/140‑1 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg > 1:938584/1‑140 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg > 2:1963124/1‑140 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg < 1:356866/140‑1 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg > 1:2844048/1‑140 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg < 1:2806101/140‑1 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg > 2:250178/1‑140 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg > 2:2806101/1‑140 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg < 1:1969182/140‑1 (MQ=255)
aaTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTgg > 2:3083408/1‑140 (MQ=255)
aTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGa < 2:1766427/140‑1 (MQ=255)
aTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGa < 2:938898/140‑1 (MQ=255)
aTGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGa < 1:950684/140‑1 (MQ=255)
aCCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGTACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGc < 1:1004824/140‑1 (MQ=255)
aCCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGc > 1:1926985/1‑140 (MQ=255)
ccGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGa < 2:1359686/136‑1 (MQ=255)
ccGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGa > 1:1359686/1‑136 (MQ=255)
ccGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGcc < 1:650987/140‑1 (MQ=255)
ccGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGcc > 2:650987/1‑140 (MQ=255)
cGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGccc < 2:203342/140‑1 (MQ=255)
aCGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTg > 2:2324318/1‑140 (MQ=255)
cGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTgg > 1:1557660/1‑140 (MQ=255)
cGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTgg < 1:2744518/140‑1 (MQ=255)
gTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGa > 2:3050415/1‑140 (MQ=255)
ttGCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGa < 1:2277257/140‑1 (MQ=255)
gCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGAtt < 2:3158617/140‑1 (MQ=255)
gCCGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGAtt > 1:2001668/1‑140 (MQ=255)
ccGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTc < 1:3050415/140‑1 (MQ=255)
ccGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTc < 1:2614432/140‑1 (MQ=255)
ccGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTc < 1:2546602/140‑1 (MQ=255)
ccGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTc < 2:2001668/140‑1 (MQ=255)
cGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTgg < 1:2678261/129‑1 (MQ=255)
cGCTTAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTgg > 2:2678261/1‑129 (MQ=255)
ttAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGAtt < 1:170689/135‑1 (MQ=255)
ttAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGAtt > 2:170689/1‑135 (MQ=255)
tAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTc < 2:2847157/140‑1 (MQ=255)
tAACCTGAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTc < 2:1926985/140‑1 (MQ=255)
gAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGa < 1:1583757/140‑1 (MQ=255)
gAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGa < 2:90110/140‑1 (MQ=255)
gAACATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGa < 1:727196/140‑1 (MQ=255)
aaCATTGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGAt > 2:2246880/1‑140 (MQ=255)
ttGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTc < 2:2834869/140‑1 (MQ=255)
tGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCa > 2:2547504/1‑140 (MQ=255)
tGAAGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCa > 1:415311/1‑140 (MQ=255)
aaGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAAc > 2:2903694/1‑140 (MQ=255)
aaGAGTTTAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAAc > 1:2438057/1‑140 (MQ=255)
tttAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAg > 1:3069312/1‑140 (MQ=255)
tAATGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAg < 1:888257/138‑1 (MQ=255)
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GTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCG > NC_000913/4444691‑4444964
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
