Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F28 I1 R1	169	80.7	2736954	99.0%	2709584	138.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,324,469	A→G	M148T (ATG→ACG)	folP ←	dihydropteroate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,324,469	0	A	G	100.0%	256.2 / NA	70	M148T (ATG→ACG)	folP	dihydropteroate synthase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (32/38); total (32/38)

GATTTTTACCGAAACCGAATCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCATGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCTGACTCACGGAT  >  NC_000913/3324332‑3324605

gaTTTTTACCGAAACCGAATCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTg                                                                                                                                        >  2:1118735/1‑140 (MQ=255)

gaTTTTTACCGAAACCGAATCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTg                                                                                                                                        >  2:660184/1‑140 (MQ=255)

 aTTTTTACCGAAACCGAATCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTgg                                                                                                                                       >  1:966464/1‑140 (MQ=255)

       accgaaaccgaaTCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTg                                                                                                                                 >  2:298349/1‑140 (MQ=255)

        ccgaaaccgaaTCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTgg                                                                                                                                <  2:133103/140‑1 (MQ=255)

         cgaaaccgaaTCCGGGGTCGAGCAACAATTTCTTTTTTGCGATCCCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGa                                                                                                                               <  1:15651/140‑1 (MQ=255)

             accgaaTCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTc                                                                                                                           <  1:660184/140‑1 (MQ=255)

             accgaaTCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTc                                                                                                                           <  1:394256/140‑1 (MQ=255)

              ccgaaTCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTcc                                                                                                                          <  2:215687/140‑1 (MQ=255)

                    ccGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCat                                                                                                                    <  2:1262359/140‑1 (MQ=255)

                         gTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCa                                                                                                               <  2:1249425/140‑1 (MQ=255)

                             aGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAg                                                                                                           >  1:626496/1‑140 (MQ=255)

                             aGCAACAATTTCTCTTTTGCGATACCCGCCTGATCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAg                                                                                                           >  2:791410/1‑140 (MQ=255)

                                aacaaTTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACa                                                                                                        <  2:950827/140‑1 (MQ=255)

                                  caaTTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACaaa                                                                                                      <  2:161733/140‑1 (MQ=255)

                                  caaTTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACaaa                                                                                                      <  2:268355/140‑1 (MQ=255)

                                         tctTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACaaaccggtaa                                                                                               >  1:351708/1‑140 (MQ=255)

                                            tttGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACaaaccggtaaacc                                                                                            >  1:557071/1‑140 (MQ=255)

                                               gCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACaaaccggtaaaccggt                                                                                         >  2:334460/1‑140 (MQ=255)

                                                    aCCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTg                                                                                    <  2:1217902/140‑1 (MQ=255)

                                                        gCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAgc                                                                                <  2:369503/140‑1 (MQ=255)

                                                        gCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAgc                                                                                <  1:930944/140‑1 (MQ=255)

                                                        gCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAgc                                                                                <  2:626496/140‑1 (MQ=255)

                                                           tGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAgccgc                                                                             >  1:236843/1‑140 (MQ=255)

                                                                gCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCa                                                                        >  2:175224/1‑140 (MQ=255)

                                                                  aaCGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTAGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCaga                                                                      <  1:361450/140‑1 (MQ=255)

                                                                      tGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAgcgc                                                                  <  1:298349/140‑1 (MQ=255)

                                                                       gCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGcc                                                                 >  1:991498/1‑140 (MQ=255)

                                                                              gCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCg                                                          >  2:391967/1‑140 (MQ=255)

                                                                                tCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGa                                                        >  2:951079/1‑140 (MQ=255)

                                                                                 cAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGaa                                                       >  2:731216/1‑140 (MQ=255)

                                                                                 cAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGaa                                                       <  2:33615/140‑1 (MQ=255)

                                                                                 cAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGa                                                        >  2:401604/1‑139 (MQ=255)

                                                                                 cAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGa                                                        <  1:401604/139‑1 (MQ=255)

                                                                                   aTAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAg                                                     >  2:254477/1‑140 (MQ=255)

                                                                                   aTAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAg                                                     >  2:680799/1‑140 (MQ=255)

                                                                                   aTAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAg                                                     >  2:174396/1‑140 (MQ=255)

                                                                                      aaGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGa                                                  <  1:241104/140‑1 (MQ=255)

                                                                                         tAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCg                                               >  2:786724/1‑140 (MQ=255)

                                                                                           gCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGa                                             <  2:1285291/140‑1 (MQ=255)

                                                                                            cGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGat                                            <  2:991498/140‑1 (MQ=255)

                                                                                            cGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGat                                            <  2:966464/140‑1 (MQ=255)

                                                                                              aTTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAgg                                                    >  1:1281543/1‑130 (MQ=255)

                                                                                              aTTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAgg                                                    <  2:1281543/130‑1 (MQ=255)

                                                                                              aTTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCgg                                              <  1:563076/136‑1 (MQ=255)

                                                                                              aTTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCgg                                              >  2:563076/1‑136 (MQ=255)

                                                                                              aTTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGatat                                          >  2:851546/1‑140 (MQ=255)

                                                                                              aTTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGatat                                          <  1:254477/140‑1 (MQ=255)

                                                                                              aTTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGatat                                          <  1:973274/140‑1 (MQ=255)

                                                                                              aTTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGatat                                          <  1:731216/140‑1 (MQ=255)

                                                                                                tCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCa                                        <  1:106979/140‑1 (MQ=255)

                                                                                                  aCTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGat                                            >  2:481604/1‑134 (MQ=255)

                                                                                                  aCTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGat                                            <  1:481604/134‑1 (MQ=255)

                                                                                                   cTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATta                                     >  2:1321498/1‑140 (MQ=255)

                                                                                                         cAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGat                                            <  2:239513/127‑1 (MQ=255)

                                                                                                         cAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGat                                            >  1:239513/1‑127 (MQ=255)

                                                                                                         cAAAGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAAtg                               <  1:175224/140‑1 (MQ=255)

                                                                                                          aaaGACATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAAtgt                              <  1:791410/140‑1 (MQ=255)

                                                                                                              aCATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGatat                                          >  1:1181876/1‑124 (MQ=255)

                                                                                                              aCATCGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGatat                                          <  2:1181876/124‑1 (MQ=255)

                                                                                                                  cGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCa                      >  2:144709/1‑140 (MQ=255)

                                                                                                                  cGTCATACTTCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCa                      >  2:991314/1‑140 (MQ=255)

                                                                                                                           tCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCt             <  1:174396/140‑1 (MQ=255)

                                                                                                                           tCGGAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCt             <  1:786724/140‑1 (MQ=255)

                                                                                                                              gAGCTTCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCTGAc          >  2:364316/1‑140 (MQ=255)

                                                                                                                                   tCCTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCTGACTCACg     >  1:524976/1‑140 (MQ=255)

                                                                                                                                    ccTGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCTGACTCACgg    <  1:951079/140‑1 (MQ=255)

                                                                                                                                      tGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCt             <  1:957530/129‑1 (MQ=255)

                                                                                                                                      tGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCt             >  2:957530/1‑129 (MQ=255)

                                                                                                                                      tGCGTGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCTGACTCACGGAt  <  1:680799/140‑1 (MQ=255)

GATTTTTACCGAAACCGAATCCGGGGTCGAGCAACAATTTCTCTTTTGCGATACCCGCCTGCTCGCAACGTGCTATTTGCTCAATAAAGTAGCGATTCACTTCTGCAAAGACATCGTCATACTTCGGAGCTTCCTGCATGGTTTTTGGATTTCCCTGCATATGCATCAGACAAACCGGTAAACCGGTTTCTGCAGCCGCCTCCAGAGCGCCAGGTTCGGAAAGGGAGCGGATATCATTAATAATGTGAGCGCCAACTTTCGCTGACTCACGGAT  >  NC_000913/3324332‑3324605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A