mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 54,641 | (G)6→7 | coding (62/1287 nt) | surA ← | peptidyl‑prolyl cis‑trans isomerase SurA |
| RA | 69,882 | T→C | D56G (GAC→GGC) | araB ← | ribulokinase |
| RA | 78,265 | T→C | S215S (AGT→AGC) | setA → | sugar exporter SetA |
| RA | 128,349 | T→C | G146G (GGT→GGC) | lpd → | lipoamide dehydrogenase |
| RA | 142,194 | G→A | G159G (GGC→GGT) | can ← | carbonic anhydrase 2 |
| RA | 179,819 | A→G | T195A (ACA→GCA) | dgt → | dGTP triphosphohydrolase |
| RA | 232,127 | C→T | R68C (CGT→TGT) | yafE → | putative S‑adenosylmethionine‑dependent methyltransferase |
| MC JC | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| RA | 275,984 | C→T | T220T (ACC→ACT) | mmuP → | S‑methyl‑L‑methionine transporter |
| RA | 336,204 | T→C | S94P (TCC→CCC) | yahE → | DUF2877 domain‑containing protein YahE |
| RA | 372,284 | T→C | V57A (GTA→GCA) | mhpD → | 2‑hydroxypentadienoate hydratase |
| RA | 380,022 | (G)10→9 | intergenic (‑141/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| RA | 412,047 | C→T | P145P (CCG→CCA) | araJ ← | putative transport protein AraJ |
| RA | 422,637 | A→G | E40E (GAA→GAG) | malZ → | maltodextrin glucosidase |
| RA | 442,284 | C→T | P246S (CCG→TCG) | thiI → | tRNA uridine 4‑sulfurtransferase |
| RA | 445,956 | T→C | G237G (GGA→GGG) | yajR ← | putative major facilitator superfamily transport protein YajR |
| RA | 489,266 | A→G | K911E (AAA→GAA) | mscK → | potassium dependent, small conductance mechanosensitive channel |
| RA | 498,410 | T→C | V119A (GTA→GCA) | hemH → | ferrochelatase |
| RA | 508,607 | G→A | intergenic (+48/+268) | ybaQ → / ← copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| RA | 511,219 | T→C | E54G (GAA→GGA) E54G (GAA→GGA) |
copA ← copA ← |
Cu(+) exporting P‑type ATPase Cu(+) exporting P‑type ATPase |
| RA | 523,741 | (G)6→5 | coding (481/4281 nt) | rhsD → | protein RhsD |
| RA | 527,577 | T→C | intergenic (+36/‑4) | rhsD → / → ybbC | protein RhsD/PF15631 family protein YbbC |
| RA | 531,186 | A→G | L14P (CTG→CCG) | selU ← | tRNA 2‑selenouridine synthase |
| RA | 533,777 | A→G | D256G (GAC→GGC) | allR → | DNA‑binding transcriptional repressor AllR |
| RA | 594,037 | A→G | V245A (GTA→GCA) | cusS ← | sensory histidine kinase CusS |
| RA | 649,628 | C→T | R288H (CGT→CAT) | citE ← | citrate lyase beta subunit |
| RA | 662,470 | A→G | V58A (GTA→GCA) | ybeD ← | DUF493 domain‑containing protein YbeD |
| RA | 730,736 | A→G | D385G (GAC→GGC) | rhsC → | rhs element protein RhsC |
| RA | 796,655 | T→C | G34G (GGT→GGC) | modC → | molybdate ABC transporter ATP binding subunit |
| RA | 807,017 | T→C | T89A (ACT→GCT) | ybhC ← | outer membrane lipoprotein YhbC |
| RA | 889,923 | A→G | intergenic (‑104/‑166) | ybjL ← / → ybjM | putative transport protein YbjL/putative inner membrane protein |
| RA | 892,418 | T→C | V151A (GTC→GCC) | rimK → | ribosomal protein S6 modification protein |
| RA | 923,993 | A→G | T244A (ACG→GCG) | clpA → | ATP‑dependent Clp protease ATP‑binding subunit ClpA |
| RA | 932,340 | (A)8→7 | intergenic (‑290/‑255) | trxB ← / → lrp | thioredoxin reductase/DNA‑binding transcriptional dual regulator Lrp |
| RA | 1,010,898 | C→T | A312V (GCC→GTC) | uup → | ATP‑binding protein with possible role in replication |
| RA | 1,014,202 | T→C | V315A (GTA→GCA) | pqiB → | intermembrane transport protein PqiB |
| RA | 1,029,596 | A→G | V125A (GTG→GCG) | rlmI ← | 23S rRNA m(5)C1962 methyltransferase |
| RA | 1,039,673 | C→T | G126G (GGC→GGT) | appB → | cytochrome bd‑II ubiquinol oxidase subunit II |
| RA | 1,100,871 | A→G | S272P (TCG→CCG) | csgG ← | curli secretion channel |
| RA | 1,143,140 | T→C | T410A (ACT→GCT) | rne ← | ribonuclease E |
| RA | 1,196,220 | C→T | H366H (CAC→CAT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,232 | C→T | T370T (ACC→ACT) | icd → | isocitrate dehydrogenase |
| RA | 1,196,245 | T→C | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,196,247 | A→G | L375M (TTA→CTG) | icd → | isocitrate dehydrogenase |
| RA | 1,212,816 | C→T | A98T (GCG→ACG) | ycgX ← | uncharacterized protein YcgX |
| RA | 1,213,895 | A→G | R55R (CGT→CGC) | bluR ← | DNA‑binding transcriptional repressor BluR |
| RA | 1,220,971 | G→A | pseudogene (1371/2648 nt) | ycgH → | putative transporter component, N‑terminal fragment |
| RA | 1,276,807 | A→G | V271A (GTA→GCA) | narX ← | sensory histidine kinase NarX |
| RA | 1,280,410 | C→T | P183S (CCG→TCG) | narG → | nitrate reductase A subunit alpha |
| RA | 1,310,788 | T→C | A26A (GCA→GCG) | yciI ← | protein YciI |
| RA | 1,322,634 | Δ1 bp | coding (313/1563 nt) | trpE ← | anthranilate synthase subunit TrpE |
| RA | 1,335,943 | T→C | L38P (CTA→CCA) | acnA → | aconitate hydratase 1 |
| RA | 1,399,985 | (C)7→8 | coding (252/516 nt) | ogt ← | methylated‑DNA‑‑[protein]‑cysteine S‑methyltransferase |
| RA | 1,434,769 | T→G | intergenic (‑363/+189) | ynaM ← / ← ttcC | Rac prophage; protein YnaM/putative tRNA 2‑thiocytidine (s(2)C32) synthase |
| RA | 1,529,396 | T→C | pseudogene (1507/2049 nt) | rhsE → | RhsE protein in rhs element |
| RA | 1,529,541 | T→C | pseudogene (1652/2049 nt) | rhsE → | RhsE protein in rhs element |
| RA | 1,537,145 | C→T | W55* (TGG→TGA) | narW ← | NarW, putative private chaperone for NarZ nitrate reductase subunit |
| RA | 1,537,724 | A→G | L377P (CTG→CCG) | narY ← | nitrate reductase Z subunit beta |
| RA | 1,541,351 | C→T | E414K (GAA→AAA) | narZ ← | nitrate reductase Z subunit alpha |
| RA | 1,590,218 | T→C | intergenic (‑217/+116) | ydeT ← / ← yneL | fimbrial usher domain‑containing protein YdeT/putative HTH‑type transcriptional regulator YneL |
| JC | 1,594,132 | (C)8→11 | pseudogene (3955/5422 nt) | yneO ← | AIDA‑I family autotransporter YneO |
| RA | 1,634,642 | C→T | G82S (GGC→AGC) | tfaQ ← | Qin prophage; putative tail fiber assembly protein TfaQ |
| RA | 1,635,384 | T→C | E155G (GAA→GGA) | ydfN ← | Qin prophage; putative side tail fiber assembly protein |
| RA | 1,685,542 | (C)6→5 | coding (1047/1404 nt) | fumC ← | fumarase C |
| RA | 1,817,644 | A→G | V286A (GTA→GCA) | chbF ← | monoacetylchitobiose‑6‑phosphate hydrolase |
| RA | 1,847,928 | T→C | E27E (GAA→GAG) | selD ← | selenide, water dikinase |
| RA | 1,872,148 | T→C | S36S (AGT→AGC) | dgcJ → | putative diguanylate cyclase DgcJ |
| RA | 1,873,384 | A→G | K448K (AAA→AAG) | dgcJ → | putative diguanylate cyclase DgcJ |
| JC JC | 1,879,829 | Δ1 bp :: IS186 (–) +6 bp :: Δ1 bp | coding (115‑120/360 nt) | yeaR ← | DUF1971 domain‑containing protein YeaR |
| RA | 1,933,347 | T→C | T420A (ACA→GCA) | edd ← | phosphogluconate dehydratase |
| MC JC | 1,978,503 | Δ776 bp | insB‑5–insA‑5 | insB‑5, insA‑5 | |
| RA | 2,012,563 | (G)6→7 | pseudogene (62/279 nt) | intG → | putative defective phage integrase |
| RA | 2,064,847 | G→A | L126L (CTG→TTG) | cobS ← | cobalamin 5'‑phosphate synthase |
| RA | 2,084,911 | T→C | V205V (GTA→GTG) | yeeE ← | inner membrane protein YeeE |
| RA | 2,102,890 | T→C | R8G (AGA→GGA) | insH‑7 ← | IS5 transposase and trans‑activator |
| RA | 2,155,225 | A→G | T404A (ACC→GCC) | mdtA → | multidrug efflux pump membrane fusion protein MdtA |
| RA | 2,173,363 | Δ2 bp | pseudogene (915‑916/1358 nt) | gatC ← | galactitol‑specific PTS enzyme IIC component |
| RA | 2,210,467 | T→C | R456R (CGT→CGC) | yehQ → | SWIM zinc finger domains‑containing protein YehQ |
| RA | 2,288,561 | (C)7→6 | pseudogene (354/2525 nt) | yejO ← | adhesin‑like autotransporter YejO |
| RA | 2,303,697 | Δ1 bp | coding (92/165 nt) | yojO → | uncharacterized protein YojO |
| RA | 2,351,405 | T→C | T324A (ACC→GCC) | glpT ← | sn‑glycerol 3‑phosphate:phosphate antiporter |
| RA | 2,380,598 | A→G | S16P (TCG→CCG) | menF ← | isochorismate synthase MenF |
| RA | 2,443,211 | T→C | V483A (GTC→GCC) | mnmC → | fused 5‑methylaminomethyl‑2‑thiouridine‑forming methyltransferase and FAD‑dependent demodification enzyme |
| RA | 2,446,579 | T→C | T299A (ACC→GCC) | aroC ← | chorismate synthase |
| RA | 2,467,734 | T→C | intergenic (+32/‑121) | intS → / → yfdG | CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase/CPS‑53 (KpLE1) prophage; putative bactoprenol‑linked glucose translocase |
| RA | 2,521,497 | G→A | intergenic (+169/+96) | lysV → / ← xapR | tRNA‑Lys/DNA‑binding transcriptional activator XapR |
| RA | 2,527,823 | T→C | V293A (GTG→GCG) | yfeH → | putative solute:Na(+) symporter |
| RA | 2,566,179 | T→C | T236A (ACG→GCG) | eutA ← | reactivating factor for ethanolamine ammonia‑lyase EutBC |
| RA | 2,567,131 | T→C | N326S (AAC→AGC) | eutH ← | putative inner membrane protein |
| RA | 2,602,017 | (C)7→6 | coding (200/2019 nt) | hyfB → | hydrogenase 4 component B |
| RA | 2,618,225 | T→C | E184E (GAA→GAG) | hda ← | inibitor of reinitiation of DNA replication |
| RA | 2,658,666 | T→C | G90G (GGA→GGG) | hscA ← | iron‑sulfur cluster biosynthesis chaperone HscA |
| RA | 2,717,821 | (C)5→6 | coding (708/1038 nt) | yfiF ← | putative methyltransferase |
| RA | 2,734,543 | (C)8→7 | coding (492/732 nt) | pgeF ← | polyphenol oxidase YfiH |
| RA | 2,757,775 | (T)6→7 | coding (826/957 nt) | yfjH ← | CP4‑57 prophage; protein YfjH |
| RA | 2,775,830 | A→G | intergenic (+14/‑89) | ypjI → / → yfjX | putative UPF0401 protein YpjI/CP4‑57 prophage; putative antirestriction protein |
| RA | 2,790,113 | C→G | G44G (GGC→GGG) | lhgO → | L‑2‑hydroxyglutarate oxidase |
| RA | 2,806,078 | C→T | A23A (GCC→GCT) | proW → | glycine betaine ABC transporter membrane subunit ProW |
| RA | 2,811,134 | A→G | H122R (CAC→CGC) | mprA → | DNA‑binding transcriptional repressor MprA |
| RA | 2,829,052 | A→G | K2K (AAA→AAG) | srlR → | DNA‑binding transcriptional repressor SrlR |
| RA | 2,831,394 | A→G | L299P (CTG→CCG) | norR ← | DNA‑binding transcriptional dual regulator NorR |
| MC JC | 2,857,096 | Δ2,538 bp | coding (4‑2541/2562 nt) | mutS → | DNA mismatch repair protein MutS |
| RA | 2,875,172 | T→C | D83G (GAC→GGC) | cysN ← | sulfate adenylyltransferase subunit 1 |
| RA | 2,917,664 | A→G | S870G (AGC→GGC) | barA → | sensory histidine kinase BarA |
| RA | 2,925,575 | T→C | G76G (GGT→GGC) | queF → | 7‑cyano‑7‑deazaguanine reductase |
| RA | 2,949,993 | (T)5→6 | coding (752/1332 nt) | argA → | N‑acetylglutamate synthase |
| RA | 2,961,100 | A→G | R443R (CGT→CGC) | recC ← | exodeoxyribonuclease V subunit RecC |
| RA | 2,973,283 | G→A | Q194* (CAG→TAG) | lplT ← | lysophospholipid transporter |
| RA | 2,981,542 | G→A | A214V (GCG→GTG) | araE ← | arabinose:H(+) symporter |
| RA | 3,001,819 | T→C | V492A (GTT→GCT) | xdhA → | putative xanthine dehydrogenase molybdenum‑binding subunit XdhA |
| RA | 3,068,157 | T→C | intergenic (‑77/+16) | yggE ← / ← argO | uncharacterized protein YggE/L‑arginine exporter |
| RA | 3,070,708 | G→A | T179T (ACC→ACT) | fbaA ← | fructose‑bisphosphate aldolase class II |
| RA | 3,152,571 | A→G | E112E (GAA→GAG) | metC → | cystathionine beta‑lyase/L‑cysteine desulfhydrase |
| RA | 3,164,769 | G→A | A402V (GCG→GTG) | parC ← | DNA topoisomerase IV subunit A |
| RA | 3,179,863 | T→C | S40S (AGT→AGC) | ygiB → | DUF1190 domain‑containing protein YgiB |
| RA | 3,180,607 | G→C | V63L (GTG→CTG) | ygiC → | putative enzyme with ATPase activity |
| RA | 3,213,348 | A→G | Y101C (TAC→TGC) | rpoD → | RNA polymerase, sigma 70 (sigma D) factor |
| RA | 3,234,758 | T→C | K373R (AAG→AGG) | rlmG ← | 23S rRNA m(2)G1835 methyltransferase |
| RA | 3,253,814 | A→G | L134P (CTG→CCG) | yhaJ ← | DNA‑binding transcriptional activator YhaJ |
| RA | 3,324,469 | A→G | M148T (ATG→ACG) | folP ← | dihydropteroate synthase |
| RA | 3,340,902 | A→G | T210A (ACG→GCG) | yrbG → | putative transport protein YrbG |
| RA | 3,340,984 | A→C | N237T (AAC→ACC) | yrbG → | putative transport protein YrbG |
| RA | 3,354,487 | C→T | intergenic (‑437/‑238) | yhcC ← / → gltB | radical SAM family oxidoreductase YhcC/glutamate synthase subunit GltB |
| RA | 3,388,726 | A→G | V134A (GTT→GCT) | aaeA ← | aromatic carboxylic acid efflux pump membrane fusion protein |
| RA | 3,415,885 | C→T | P285S (CCG→TCG) | acrF → | multidrug efflux pump RND permease AcrF |
| RA | 3,422,035 | C→T | G237G (GGC→GGT) | yhdY → | putative ABC transporter membrane subunit YhdY |
| RA | 3,432,994 | (C)6→5 | coding (567/1125 nt) | smf ← | protein Smf |
| RA | 3,543,262 | A→G | L32L (TTA→TTG) | rpnA → | recombination‑promoting nuclease RpnA |
| RA | 3,547,951 | A→G | intergenic (+76/+35) | gntT → / ← malQ | high‑affinity gluconate transporter/4‑alpha‑glucanotransferase |
| RA | 3,549,792 | (C)6→7 | coding (279/2085 nt) | malQ ← | 4‑alpha‑glucanotransferase |
| RA | 3,560,455 | +G | pseudogene (151/758 nt) | glpR ← | DNA‑binding transcriptional repressor GlpR |
| RA | 3,633,068 | T→C | pseudogene (1391/1607 nt) | yhiL ← | putative uncharacterized protein YhiL |
| RA | 3,663,316 | Δ1 bp | coding (2903/3114 nt) | mdtF → | multidrug efflux pump RND permease MdtF |
| RA | 3,667,956 | T→C | A411A (GCA→GCG) | ccp ← | cytochrome c peroxidase |
| RA | 3,805,061 | T→C | Y19C (TAC→TGC) | waaS ← | lipopolysaccharide core biosynthesis protein |
| RA | 3,815,883 | +C | coding (667/687 nt) | rph ← | truncated RNase PH |
| RA | 3,833,576 | T→C | D321G (GAC→GGC) | yicI ← | alpha‑D‑xyloside xylohydrolase |
| RA | 3,839,566 | A→G | L143P (CTT→CCT) | nlpA ← | lipoprotein‑28 |
| RA | 3,846,450 | T→C | T240A (ACA→GCA) | uhpT ← | hexose‑6‑phosphate:phosphate antiporter |
| RA | 3,860,630 | (C)5→4 | coding (348/894 nt) | yidL → | putative DNA‑binding transcriptional regulator YidL |
| RA | 3,878,207 | T→C | N638S (AAC→AGC) | gyrB ← | DNA gyrase subunit B |
| RA | 3,884,387 | T→C | F18L (TTC→CTC) | rpmH → | 50S ribosomal subunit protein L34 |
| RA | 3,890,927 | T→C | V231A (GTA→GCA) | tnaB → | tryptophan:H(+) symporter TnaB |
| RA | 3,935,222 | C→T | A482V (GCC→GTC) | rbsA → | ribose ABC transporter ATP binding subunit |
| RA | 3,939,658 | T→C | T319A (ACC→GCC) | hsrA ← | putative transporter HsrA |
| RA | 3,939,781 | T→C | T278A (ACC→GCC) | hsrA ← | putative transporter HsrA |
| RA | 3,980,957 | (G)6→7 | coding (71/1386 nt) | yifK → | putative transporter YifK |
| RA | 4,009,923 | T→C | L252L (TTA→CTA) | pldB → | lysophospholipase L2 |
| RA | 4,060,280 | (T)9→8 | intergenic (+50/‑167) | bipA → / → yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| RA | 4,141,044 | G→A | A393V (GCG→GTG) | ptsA ← | putative PTS multiphosphoryl transfer protein PtsA |
| RA | 4,152,473 | A→G | V209A (GTG→GCG) | ppc ← | phosphoenolpyruvate carboxylase |
| RA | 4,157,589 | T→C | V247A (GTG→GCG) | argH → | argininosuccinate lyase |
| RA | 4,243,814 | A→G | L421P (CTG→CCG) | malF ← | maltose ABC transporter membrane subunit MalF |
| RA | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,329,894 | (G)6→7 | coding (535/879 nt) | yjcZ → | uncharacterized protein YjcZ |
| RA | 4,379,308 | G→A | A20V (GCC→GTC) | frdD ← | fumarate reductase membrane protein FrdD |
| RA | 4,380,030 | C→T | G163D (GGC→GAC) | frdB ← | fumarate reductase iron‑sulfur protein |
| RA | 4,390,183 | A→G | Y60H (TAC→CAC) | psd ← | phosphatidylserine decarboxylase proenzyme |
| RA | 4,443,679 | A→G | N433S (AAC→AGC) | tamA → | translocation and assembly module subunit TamA |
| RA | 4,445,095 | C→T | G328G (GGC→GGT) | tamB → | translocation and assembly module subunit TamB |
| RA | 4,445,549 | A→G | T480A (ACC→GCC) | tamB → | translocation and assembly module subunit TamB |
| RA | 4,550,283 | C→T | S338S (TCG→TCA) | gntP ← | fructuronate transporter |
| RA | 4,558,802 | A→G | L242P (CTG→CCG) | iadA ← | isoaspartyl dipeptidase |
| RA | 4,559,111 | A→G | V139A (GTC→GCC) | iadA ← | isoaspartyl dipeptidase |
| RA | 4,606,330 | (G)8→9 | noncoding (72/87 nt) | leuQ ← | tRNA‑Leu |
| RA | 4,608,220 | A→G | L12L (TTA→TTG) | rimI → | ribosomal‑protein‑S18‑alanine N‑acetyltransferase |
| RA | 4,609,962 | C→T | Y183Y (TAC→TAT) | prfC → | peptide chain release factor RF3 |
| RA | 4,621,903 | A→G | A45A (GCA→GCG) | yjjJ → | toxin YjjJ |
| RA | 4,629,055 | A→G | F490L (TTC→CTC) | ettA ← | energy‑dependent translational throttle protein EttA |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1196273 | 1211433 | 15161 | 25 [21] | [22] 26 | [icd]–[icdC] | [icd],ymfD,ymfE,lit,intE,xisE,ymfH,ymfI,ymfJ,ymfK,ymfT,ymfL,ymfM,oweE,ymfN,aaaE,ymfR,beeE,jayE,ymfQ,ycfK,tfaP,tfaE,stfE,pinE,mcrA,[icdC] |
| * | * | ÷ | NC_000913 | 1633054–1633220 | 1633823–1633631 | 412–770 | 23 [22] | [21] 23 | ydfK–[pinQ] | ydfK,[pinQ] |
| * | * | ÷ | NC_000913 | 3423779–3424234 | 3424536–3424240 | 7–758 | 23 [21] | [20] 23 | [rrfD]–[rrlD] | [rrfD],[rrlD] |
| * | * | ÷ | NC_000913 | 3941762–3942014 | 3946118–3945916 | 3903–4357 | 26 [22] | [22] 23 | rrsC–[rrlC] | rrsC,gltU,[rrlC] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 374963 | NA (NA) | 45 (0.820) | 13/190 | 2.6 | NA | noncoding (33/34 nt) | other | REP31a |
| ? | NC_000913 | = 377487 | NA (NA) | intergenic (+176/+48) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
| * | ? | NC_000913 | 375304 = | NA (NA) | 26 (0.390) | 19/232 | 2.2 | NA | noncoding (17/36 nt) | other | REP31h |
| ? | NC_000913 | 377351 = | NA (NA) | noncoding (16/37 nt) | other | REP32a | |||||
| * | ? | NC_000913 | = 1299498 | 0 (0.000) | 78 (1.000) | 49/268 | 0.3 | 99.4% | intergenic (+253/‑33) | ychE/insH21 | putative inner membrane protein/IS5 transposase and trans‑activator |
| ? | NC_000913 | 1300698 = | 1 (0.010) | intergenic (+151/‑484) | insH21/oppA | IS5 transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | 3363001 = | 103 (1.280) | 120 (1.510) | 63/274 | 0.1 | 69.9% | coding (195/2382 nt) | yhcD | putative fimbrial usher protein YhcD |
| ? | NC_000913 | 3766087 = | 1 (0.010) | coding (3905/4134 nt) | rhsA | rhs element protein RhsA | |||||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 106 (1.320) | 69/276 | 0.1 | 98.2% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3766089 | 2 (0.020) | coding (3907/4134 nt) | rhsA | rhs element protein RhsA | |||||